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The map label for this gene is rfbU [H]

Identifier: 186476439

GI number: 186476439

Start: 1908394

End: 1909494

Strand: Reverse

Name: rfbU [H]

Synonym: Bphy_1681

Alternate gene names: 186476439

Gene position: 1909494-1908394 (Counterclockwise)

Preceding gene: 186476440

Following gene: 186476438

Centisome position: 54.88

GC content: 64.31

Gene sequence:

>1101_bases
ATGTTGAAACCCCTTCCCAATCTGCTGATAAACGGCCGCTTCCTTGGCCGCCGTGCGACGGGTGTCGACCGCTTCGCGTT
CGAGACCATCCGGGCGCTCGATCAACTGATCGACGCGGGCGATCCCCTCGTCGCCGCAATGCGGGCCGAGATCATCGTAC
CCGAAGCATTGACGGGCATCTCGAATCCCTTTCGGCACGTCGGTCTGCGAGCAAGCGGGAAGGGCGGTGGACTGCGTTGG
GAGCAGCTCGCATTACCGCAGGCTGCGCGCGGCCGGTTGCTGCTCAATCTGTGCAACTCTGGACCGCTGTTATACCGCCG
TCAGGTGACGGTGCTGCACGACGCGGCGCCCGCACGCGTTCCCGACAGTTACAGCCGGTCCTTCGTTGCCTGGTATCGTC
TGATGGCGCCGCGTCTGGGCCGCGTATCGCAGCGTGTCATTACCGTGTCGGAATTTTCACGGCGCGAACTGTGTGATGCC
TACGGAATCCCGGCCGGCAAGATCGGCGTCGTGCCGGAGAGCGGCGAACACATGTTGCGCGTGCAAGAGGATGAGGCGTC
CGTGGCGCCGAAGGTGAACGGGCGTCCTTTCGTGCTTGCAGTCGGAAGTCTCAACCGGCACAAGAACTTTCGGCTGGTGG
CAGAGGCGGCGAAGCGTATCGGCGACGCGCAATTCGACATCGTGGTGGTGGGCGGCGGAGATGCGCGGGTATACGGGACG
GACAAGGATGCGTTGCCCCGGTTCGTCAAGCACCTCGGTTACGTGAGCGACGGCGAACTGGCCGCGCTTTACCGGCGTGC
AGCATGCTTCGTCTATCCATCACGTTATGAGGGATTCGGGCTGCCGCCTGTCGAGGCGCTGGCGCTGGGCTGTCCCGTCA
TCGCTTCGAGGCTGCCGGCCATCCAGGAAGCGTGCGGTGATGCCGTGCTCTACACGTCGCCGGATGATCCCGCAGAACTG
GCGGGCCTGCTCGAACGGATCACGACAGACGCGACCTTGCGTGCGAGCCTGCGCGAGCGGGCGCGCGCACGTACGGAAGC
GCTGACCTGGCGCGCGACGGCAACCAGGTTGATCGAGGAGATTTCGCCGTGGCTAATGTAA

Upstream 100 bases:

>100_bases
TCGACTTCGCGTGTGCGAGTTGACCTCGCGTGAGCGTCGGCGAACATTCGTCGGCGCGGAGATCGGCCACACTGCAAGCC
AACGAACTGCATGGTGTGGC

Downstream 100 bases:

>100_bases
CGCTCGCTCCCACCCCTGCTAACGACCAGCGCCGTTTTGGCCGCGTCGCACTCGTCCACGACTGGCTGGCTGCGTATGCG
GGCTCGGAGAAGGTGGTGGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MLKPLPNLLINGRFLGRRATGVDRFAFETIRALDQLIDAGDPLVAAMRAEIIVPEALTGISNPFRHVGLRASGKGGGLRW
EQLALPQAARGRLLLNLCNSGPLLYRRQVTVLHDAAPARVPDSYSRSFVAWYRLMAPRLGRVSQRVITVSEFSRRELCDA
YGIPAGKIGVVPESGEHMLRVQEDEASVAPKVNGRPFVLAVGSLNRHKNFRLVAEAAKRIGDAQFDIVVVGGGDARVYGT
DKDALPRFVKHLGYVSDGELAALYRRAACFVYPSRYEGFGLPPVEALALGCPVIASRLPAIQEACGDAVLYTSPDDPAEL
AGLLERITTDATLRASLRERARARTEALTWRATATRLIEEISPWLM

Sequences:

>Translated_366_residues
MLKPLPNLLINGRFLGRRATGVDRFAFETIRALDQLIDAGDPLVAAMRAEIIVPEALTGISNPFRHVGLRASGKGGGLRW
EQLALPQAARGRLLLNLCNSGPLLYRRQVTVLHDAAPARVPDSYSRSFVAWYRLMAPRLGRVSQRVITVSEFSRRELCDA
YGIPAGKIGVVPESGEHMLRVQEDEASVAPKVNGRPFVLAVGSLNRHKNFRLVAEAAKRIGDAQFDIVVVGGGDARVYGT
DKDALPRFVKHLGYVSDGELAALYRRAACFVYPSRYEGFGLPPVEALALGCPVIASRLPAIQEACGDAVLYTSPDDPAEL
AGLLERITTDATLRASLRERARARTEALTWRATATRLIEEISPWLM
>Mature_366_residues
MLKPLPNLLINGRFLGRRATGVDRFAFETIRALDQLIDAGDPLVAAMRAEIIVPEALTGISNPFRHVGLRASGKGGGLRW
EQLALPQAARGRLLLNLCNSGPLLYRRQVTVLHDAAPARVPDSYSRSFVAWYRLMAPRLGRVSQRVITVSEFSRRELCDA
YGIPAGKIGVVPESGEHMLRVQEDEASVAPKVNGRPFVLAVGSLNRHKNFRLVAEAAKRIGDAQFDIVVVGGGDARVYGT
DKDALPRFVKHLGYVSDGELAALYRRAACFVYPSRYEGFGLPPVEALALGCPVIASRLPAIQEACGDAVLYTSPDDPAEL
AGLLERITTDATLRASLRERARARTEALTWRATATRLIEEISPWLM

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40003; Mature: 40003

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPLPNLLINGRFLGRRATGVDRFAFETIRALDQLIDAGDPLVAAMRAEIIVPEALTGI
CCCCCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCC
SNPFRHVGLRASGKGGGLRWEQLALPQAARGRLLLNLCNSGPLLYRRQVTVLHDAAPARV
CCHHHHCCCEECCCCCCCCHHHHCCCHHHCCEEEEEECCCCCEEEEEEEEEEECCCCCCC
PDSYSRSFVAWYRLMAPRLGRVSQRVITVSEFSRRELCDAYGIPAGKIGVVPESGEHMLR
CCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEE
VQEDEASVAPKVNGRPFVLAVGSLNRHKNFRLVAEAAKRIGDAQFDIVVVGGGDARVYGT
EECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEC
DKDALPRFVKHLGYVSDGELAALYRRAACFVYPSRYEGFGLPPVEALALGCPVIASRLPA
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHCCHHHHHHCHH
IQEACGDAVLYTSPDDPAELAGLLERITTDATLRASLRERARARTEALTWRATATRLIEE
HHHHHCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISPWLM
HHHCCC
>Mature Secondary Structure
MLKPLPNLLINGRFLGRRATGVDRFAFETIRALDQLIDAGDPLVAAMRAEIIVPEALTGI
CCCCCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCC
SNPFRHVGLRASGKGGGLRWEQLALPQAARGRLLLNLCNSGPLLYRRQVTVLHDAAPARV
CCHHHHCCCEECCCCCCCCHHHHCCCHHHCCEEEEEECCCCCEEEEEEEEEEECCCCCCC
PDSYSRSFVAWYRLMAPRLGRVSQRVITVSEFSRRELCDAYGIPAGKIGVVPESGEHMLR
CCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEE
VQEDEASVAPKVNGRPFVLAVGSLNRHKNFRLVAEAAKRIGDAQFDIVVVGGGDARVYGT
EECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEC
DKDALPRFVKHLGYVSDGELAALYRRAACFVYPSRYEGFGLPPVEALALGCPVIASRLPA
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHCCHHHHHHCHH
IQEACGDAVLYTSPDDPAELAGLLERITTDATLRASLRERARARTEALTWRATATRLIEE
HHHHHCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISPWLM
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]