| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476438
Identifier: 186476438
GI number: 186476438
Start: 1907189
End: 1908406
Strand: Reverse
Name: 186476438
Synonym: Bphy_1680
Alternate gene names: NA
Gene position: 1908406-1907189 (Counterclockwise)
Preceding gene: 186476439
Following gene: 186476437
Centisome position: 54.85
GC content: 62.97
Gene sequence:
>1218_bases GTGGCTAATGTAACGCTCGCTCCCACCCCTGCTAACGACCAGCGCCGTTTTGGCCGCGTCGCACTCGTCCACGACTGGCT GGCTGCGTATGCGGGCTCGGAGAAGGTGGTGGAGCAGATTCTTCAACTATTCCCACACGCCGATCTGTACAGCGTCGTCG ATTTTTTTCCTGAGGCGCAGCGAGACGTGTTGGGCGGAAAACACGCCCATACCTCGTTCATCCAGCATCTGCCACGCGCG CGCAAATCGTTTCGCCATTATCTTCCGCTGATGCCGCTGGCGATCGAGCAATTCGATCTGTCGGGTTACGACCTGGTGAT TTCATCGAACCATGCCGTGGCCAAGGGCGTGCTGACGGGCCCGCATCAGGTCCACGTGAGCTATGTGCATTCGCCGATTC GCTATGCGTGGGATCTGCAGCATCAATATCTGGCCGAGGCGGGCATGCAGCGCGGCATCAAGAGCTGGATCGTGCGTCTG CTGCTGCATTACATGCGTATCTGGGATCATCGCACCGCGCATGGCGTGGATGCCTTTGTCGCCAATTCGGCCTTCGTGGG CCGGCGCATCCGCAAGGCTTACGGCAGCGACGCTGCCGTCGTCTATCCGCCCGTCGACGTCGAGCGTTTCGAGCTCAGCA CGGAGCGCGAGGACTTTTATCTGATCGCGTCGCGCATGGTCCCGTACAAGCGCGTGCCGCTGATCGTCGAGGCCTTCGCC GCGATGCCGTCGCGGCGCCTCGTCGTGATCGGCGACGGGACGGATTTCGCGCGCGCCAAGGCATGCGCGACGCCGAATGT GACTCTGCTCGGGTATCAACCCGATGCCGCACTGGTGGACTACATGCAGCGCGCGCGCGCATTTGTGTTTGCCGCGGAGG AGGACTTCGGCATTTCGGTGGTCGAAGCGCAAGCCTGCGGTACGCCCGTGATTGCATTGGGCCGGGGCGGTGTGCGGGAG ATCGTCGTCGAATCACAGGACACCGAACGGGCGACGGGCCTCTTCTTCAACGAACAGAGCGTGGCTTCCATTGTCGATGC GGTGGAGCGCTTCGAACAGTCACCGCCGTTCCGCGCGGAAGTGTGCCGCCGCAACGCGCTGCGCTTTACGAAAGAGCGGT TCAAGCGCGAGTTCCTCGGTGTGGTGGAGCGGGCGGTCGAAGCCAGCAAGGCGCCCGCCGATTCCGGGCCGGAGATCCGC CGCTGGCGATCTGCCTGA
Upstream 100 bases:
>100_bases ACGCGACCTTGCGTGCGAGCCTGCGCGAGCGGGCGCGCGCACGTACGGAAGCGCTGACCTGGCGCGCGACGGCAACCAGG TTGATCGAGGAGATTTCGCC
Downstream 100 bases:
>100_bases GCCGTGCAATGGCAGGGCCGTGCGCGCATGCGTTCGGTGAATGGAAGGGAGAGAAAGCAGTGCCGTCAATATACGGACTC GTGGTCATCGTCATTGGGCT
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MANVTLAPTPANDQRRFGRVALVHDWLAAYAGSEKVVEQILQLFPHADLYSVVDFFPEAQRDVLGGKHAHTSFIQHLPRA RKSFRHYLPLMPLAIEQFDLSGYDLVISSNHAVAKGVLTGPHQVHVSYVHSPIRYAWDLQHQYLAEAGMQRGIKSWIVRL LLHYMRIWDHRTAHGVDAFVANSAFVGRRIRKAYGSDAAVVYPPVDVERFELSTEREDFYLIASRMVPYKRVPLIVEAFA AMPSRRLVVIGDGTDFARAKACATPNVTLLGYQPDAALVDYMQRARAFVFAAEEDFGISVVEAQACGTPVIALGRGGVRE IVVESQDTERATGLFFNEQSVASIVDAVERFEQSPPFRAEVCRRNALRFTKERFKREFLGVVERAVEASKAPADSGPEIR RWRSA
Sequences:
>Translated_405_residues MANVTLAPTPANDQRRFGRVALVHDWLAAYAGSEKVVEQILQLFPHADLYSVVDFFPEAQRDVLGGKHAHTSFIQHLPRA RKSFRHYLPLMPLAIEQFDLSGYDLVISSNHAVAKGVLTGPHQVHVSYVHSPIRYAWDLQHQYLAEAGMQRGIKSWIVRL LLHYMRIWDHRTAHGVDAFVANSAFVGRRIRKAYGSDAAVVYPPVDVERFELSTEREDFYLIASRMVPYKRVPLIVEAFA AMPSRRLVVIGDGTDFARAKACATPNVTLLGYQPDAALVDYMQRARAFVFAAEEDFGISVVEAQACGTPVIALGRGGVRE IVVESQDTERATGLFFNEQSVASIVDAVERFEQSPPFRAEVCRRNALRFTKERFKREFLGVVERAVEASKAPADSGPEIR RWRSA >Mature_404_residues ANVTLAPTPANDQRRFGRVALVHDWLAAYAGSEKVVEQILQLFPHADLYSVVDFFPEAQRDVLGGKHAHTSFIQHLPRAR KSFRHYLPLMPLAIEQFDLSGYDLVISSNHAVAKGVLTGPHQVHVSYVHSPIRYAWDLQHQYLAEAGMQRGIKSWIVRLL LHYMRIWDHRTAHGVDAFVANSAFVGRRIRKAYGSDAAVVYPPVDVERFELSTEREDFYLIASRMVPYKRVPLIVEAFAA MPSRRLVVIGDGTDFARAKACATPNVTLLGYQPDAALVDYMQRARAFVFAAEEDFGISVVEAQACGTPVIALGRGGVREI VVESQDTERATGLFFNEQSVASIVDAVERFEQSPPFRAEVCRRNALRFTKERFKREFLGVVERAVEASKAPADSGPEIRR WRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45480; Mature: 45349
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVTLAPTPANDQRRFGRVALVHDWLAAYAGSEKVVEQILQLFPHADLYSVVDFFPEAQ CCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCHHH RDVLGGKHAHTSFIQHLPRARKSFRHYLPLMPLAIEQFDLSGYDLVISSNHAVAKGVLTG HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCHHHHCEECC PHQVHVSYVHSPIRYAWDLQHQYLAEAGMQRGIKSWIVRLLLHYMRIWDHRTAHGVDAFV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ANSAFVGRRIRKAYGSDAAVVYPPVDVERFELSTEREDFYLIASRMVPYKRVPLIVEAFA HHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCHHEEEHHHCCCCHHHHHHHHHHH AMPSRRLVVIGDGTDFARAKACATPNVTLLGYQPDAALVDYMQRARAFVFAAEEDFGISV CCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHEEEEECCCCCEEE VEAQACGTPVIALGRGGVREIVVESQDTERATGLFFNEQSVASIVDAVERFEQSPPFRAE EEHHHCCCCEEEECCCCHHHHEECCCCCCHHHCEEECHHHHHHHHHHHHHHHCCCCHHHH VCRRNALRFTKERFKREFLGVVERAVEASKAPADSGPEIRRWRSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC >Mature Secondary Structure ANVTLAPTPANDQRRFGRVALVHDWLAAYAGSEKVVEQILQLFPHADLYSVVDFFPEAQ CCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCHHH RDVLGGKHAHTSFIQHLPRARKSFRHYLPLMPLAIEQFDLSGYDLVISSNHAVAKGVLTG HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCHHHHCEECC PHQVHVSYVHSPIRYAWDLQHQYLAEAGMQRGIKSWIVRLLLHYMRIWDHRTAHGVDAFV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ANSAFVGRRIRKAYGSDAAVVYPPVDVERFELSTEREDFYLIASRMVPYKRVPLIVEAFA HHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCHHEEEHHHCCCCHHHHHHHHHHH AMPSRRLVVIGDGTDFARAKACATPNVTLLGYQPDAALVDYMQRARAFVFAAEEDFGISV CCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHEEEEECCCCCEEE VEAQACGTPVIALGRGGVREIVVESQDTERATGLFFNEQSVASIVDAVERFEQSPPFRAE EEHHHCCCCEEEECCCCHHHHEECCCCCCHHHCEEECHHHHHHHHHHHHHHHCCCCHHHH VCRRNALRFTKERFKREFLGVVERAVEASKAPADSGPEIRRWRSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA