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The map label for this gene is rfbU [H]

Identifier: 186476435

GI number: 186476435

Start: 1903257

End: 1904354

Strand: Reverse

Name: rfbU [H]

Synonym: Bphy_1677

Alternate gene names: 186476435

Gene position: 1904354-1903257 (Counterclockwise)

Preceding gene: 186476436

Following gene: 186476434

Centisome position: 54.74

GC content: 59.93

Gene sequence:

>1098_bases
ATGTACAAGACGATAGCGTTCAACGGCAAGTTCTTCGGCGCAGAGGTAACGGGTGTGCACAGGGTTGCAGAGCAACTCAT
CGCCGCGACCGATGCGTTGATTGCGGAACATTCCGCTCATGGCGCCGAGTATGCGCTCGTGATCAGAAATAGCGTCAAGG
TTCCGCCTTACCGCAATATCCTGTGCGTCCGGGAGAGTCCGCTGGTTCGCCGGATGCACAGAATAGCGTGGGAGCAGGCC
TATTTACCGCTGGCGCGAAGAAAGGACTTCATTCTCAATCTGTGCAATCTGGGCCCCCTGTTGCATCACGATTGCGCAAC
GCTGATACACGATGCCCAGGTGTATTCCGCGCCGGAGTCCTACTCCCGGTCTTTCCGTCTCTGGTACAAGTTTCTGTTCT
TTTTTATCGGCAGACGGCACAAGCTGATCGTCACCGTGTCGGAGTTCTCCAGGCAGGAACTCGTGCACTACGGCGTTGCC
AGTGCCGACAAGATCGTCGTCGTACACAACGGCTGCGATCATGTTCTGCAGATACGGCCTGACGAGGGGCAGCTTGCGGC
ATTGAAGCTTGTGCCAGGGCGCTATGTTCTCGCGCTCGCCAACACGCAGAAGCACAAGAACGTCGCCATTCTTCTCAAGG
CTTTCGCCAGGCCCGAACTGCAGGACGTGACGCTCGTGCTGTTCGGCGGCGCGAGCAAAGCCAGTTTCGAGAATCTCGGG
CACGTGGTGCCTCCCAATGTGCGATTCGCTGGCTGGGTCACCGATCCGGAACTCGTGGGCTTGATGGCCAACGCCGGCGC
ACTTGCCTTTCCATCCCTGACGGAAGGGTTTGGTTTGCCGCCGCTGGAGGCGATGGCGCTCGGCTGTCCGGTCGTGGCTG
CGCCGTTTGGCGCGCTTCCGGAGGTGTGCGGCGAGGCCGCGCTGTATGCCGACCCCTTCGACCCGGGCCAATGGAGCCTG
AAACTACGAACGGTGCTCGACGATAAAACGATGCGTGAATCGATGATATCGGCTGGACGGCGGCAGGCCGGCCTGTTCAC
CTGGAAACGGGCCGCGCAAAAGCTGTTCGATGCCGTGAAAGCTGCGACGCCCGCCTGA

Upstream 100 bases:

>100_bases
TCCCGCTGTGCGGGCGAACGGCCATGCCGGCGCGAGGTTCAGCGTGGCGAAGCTGGCTGACTTCGTGTCGGCCAACCATC
TGTCAACGAGGCGGTGCGGC

Downstream 100 bases:

>100_bases
CCGGAATCGACTCTGTGATCGGCCGGACGCGCCGTTGCATCGCTTTTTAGGGGCAAGACAATGAAGAAGTTGGACTCGAT
CCAGGTGCTCCGCGCAGTCG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MYKTIAFNGKFFGAEVTGVHRVAEQLIAATDALIAEHSAHGAEYALVIRNSVKVPPYRNILCVRESPLVRRMHRIAWEQA
YLPLARRKDFILNLCNLGPLLHHDCATLIHDAQVYSAPESYSRSFRLWYKFLFFFIGRRHKLIVTVSEFSRQELVHYGVA
SADKIVVVHNGCDHVLQIRPDEGQLAALKLVPGRYVLALANTQKHKNVAILLKAFARPELQDVTLVLFGGASKASFENLG
HVVPPNVRFAGWVTDPELVGLMANAGALAFPSLTEGFGLPPLEAMALGCPVVAAPFGALPEVCGEAALYADPFDPGQWSL
KLRTVLDDKTMRESMISAGRRQAGLFTWKRAAQKLFDAVKAATPA

Sequences:

>Translated_365_residues
MYKTIAFNGKFFGAEVTGVHRVAEQLIAATDALIAEHSAHGAEYALVIRNSVKVPPYRNILCVRESPLVRRMHRIAWEQA
YLPLARRKDFILNLCNLGPLLHHDCATLIHDAQVYSAPESYSRSFRLWYKFLFFFIGRRHKLIVTVSEFSRQELVHYGVA
SADKIVVVHNGCDHVLQIRPDEGQLAALKLVPGRYVLALANTQKHKNVAILLKAFARPELQDVTLVLFGGASKASFENLG
HVVPPNVRFAGWVTDPELVGLMANAGALAFPSLTEGFGLPPLEAMALGCPVVAAPFGALPEVCGEAALYADPFDPGQWSL
KLRTVLDDKTMRESMISAGRRQAGLFTWKRAAQKLFDAVKAATPA
>Mature_365_residues
MYKTIAFNGKFFGAEVTGVHRVAEQLIAATDALIAEHSAHGAEYALVIRNSVKVPPYRNILCVRESPLVRRMHRIAWEQA
YLPLARRKDFILNLCNLGPLLHHDCATLIHDAQVYSAPESYSRSFRLWYKFLFFFIGRRHKLIVTVSEFSRQELVHYGVA
SADKIVVVHNGCDHVLQIRPDEGQLAALKLVPGRYVLALANTQKHKNVAILLKAFARPELQDVTLVLFGGASKASFENLG
HVVPPNVRFAGWVTDPELVGLMANAGALAFPSLTEGFGLPPLEAMALGCPVVAAPFGALPEVCGEAALYADPFDPGQWSL
KLRTVLDDKTMRESMISAGRRQAGLFTWKRAAQKLFDAVKAATPA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40235; Mature: 40235

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKTIAFNGKFFGAEVTGVHRVAEQLIAATDALIAEHSAHGAEYALVIRNSVKVPPYRNI
CCEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCE
LCVRESPLVRRMHRIAWEQAYLPLARRKDFILNLCNLGPLLHHDCATLIHDAQVYSAPES
EEECCCHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH
YSRSFRLWYKFLFFFIGRRHKLIVTVSEFSRQELVHYGVASADKIVVVHNGCDHVLQIRP
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEC
DEGQLAALKLVPGRYVLALANTQKHKNVAILLKAFARPELQDVTLVLFGGASKASFENLG
CCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCC
HVVPPNVRFAGWVTDPELVGLMANAGALAFPSLTEGFGLPPLEAMALGCPVVAAPFGALP
CCCCCCCEEEEECCCHHHHHHHHCCCCEECCCHHCCCCCCCHHHHHHCCCHHHCCCCCHH
EVCGEAALYADPFDPGQWSLKLRTVLDDKTMRESMISAGRRQAGLFTWKRAAQKLFDAVK
HHHCCCEEECCCCCCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AATPA
HCCCC
>Mature Secondary Structure
MYKTIAFNGKFFGAEVTGVHRVAEQLIAATDALIAEHSAHGAEYALVIRNSVKVPPYRNI
CCEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCE
LCVRESPLVRRMHRIAWEQAYLPLARRKDFILNLCNLGPLLHHDCATLIHDAQVYSAPES
EEECCCHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHH
YSRSFRLWYKFLFFFIGRRHKLIVTVSEFSRQELVHYGVASADKIVVVHNGCDHVLQIRP
HHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEC
DEGQLAALKLVPGRYVLALANTQKHKNVAILLKAFARPELQDVTLVLFGGASKASFENLG
CCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCC
HVVPPNVRFAGWVTDPELVGLMANAGALAFPSLTEGFGLPPLEAMALGCPVVAAPFGALP
CCCCCCCEEEEECCCHHHHHHHHCCCCEECCCHHCCCCCCCHHHHHHCCCHHHCCCCCHH
EVCGEAALYADPFDPGQWSLKLRTVLDDKTMRESMISAGRRQAGLFTWKRAAQKLFDAVK
HHHCCCEEECCCCCCCCEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AATPA
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]