| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is nudC [C]
Identifier: 186476419
GI number: 186476419
Start: 1876447
End: 1876992
Strand: Direct
Name: nudC [C]
Synonym: Bphy_1661
Alternate gene names: 186476419
Gene position: 1876447-1876992 (Clockwise)
Preceding gene: 186476416
Following gene: 186476420
Centisome position: 53.93
GC content: 63.0
Gene sequence:
>546_bases ATGAAATTCTGTTCCGTCTGCGGCCACGCAGTGGGCCTGAGCATTCCGCCCGGCGACAATCGGGAGCGCTTCGTCTGCGC AAGCTGTGGCACCGTGCACTATCAGAATCCGCGCAACGTGGTTGGCACCGTGCCCGTCTGGGACGACAAGGTGCTGTTGT GCCGCCGCGCGATCGAACCGCGCTACGGCTACTGGACCCTGCCCGCAGGCTTCATGGAAATGGGCGAAACGACATCGGAA GCCGCCGCGCGTGAAACGCTGGAGGAAGCCGGCGCGCGTGTCGAGGTGCAGAACCTGTACACGCTGCTGAACGTGCCGCA CGTGCATCAGGTGCATCTGTTCTATCTCGCGCGGCTGCTCGATCTCGATGTCGAAGCGGGTGAAGAGAGCCTCGAAGTGC GCCTCTTCGAAGAACACGAAATTCCGTGGGGCGACATCGCGTTCCCGACCGTCGCGCAAACCCTGCGCTTCTTCTTCACC GATCGCACGTCGGGCAACTACGGCCTGCACACGGGCGATATCTTCCGCTCGCTGCGCGACGGTTGA
Upstream 100 bases:
>100_bases GGAACGCGGCCTCGCGGATTCACAACCGTGCACCTGCGCGCGTCGTTGTCGATGCGCAGCCCGGTGATACACTCCCATCA CCGTTCTCCGTCCCCTCTCT
Downstream 100 bases:
>100_bases CGACAACAGCGGCCGCATGGTTCCCTGGCTAGGCCCCGACGATCCCTTTCCGCCCGTCGAACGCGCGCTGTCCGCGGCGA GCGGCGCGCCCGGCCTGCTC
Product: NUDIX hydrolase
Products: AMP; NMNH. [C]
Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; MutT/NUDIX Family Protein; Hydrolase NUDIX Family; Mutator MutT Protein; NUDIX/MutT Family Protein; Nudix Hydrolase MutT Family; NUDIX Family Hydrolase; NUDIX Family NudH Subfamily Hydrolase; Related Nudix Hydrolase; Nudix/Mutt Family Protein; Hydrolase NUDIX Family Protein
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKFCSVCGHAVGLSIPPGDNRERFVCASCGTVHYQNPRNVVGTVPVWDDKVLLCRRAIEPRYGYWTLPAGFMEMGETTSE AAARETLEEAGARVEVQNLYTLLNVPHVHQVHLFYLARLLDLDVEAGEESLEVRLFEEHEIPWGDIAFPTVAQTLRFFFT DRTSGNYGLHTGDIFRSLRDG
Sequences:
>Translated_181_residues MKFCSVCGHAVGLSIPPGDNRERFVCASCGTVHYQNPRNVVGTVPVWDDKVLLCRRAIEPRYGYWTLPAGFMEMGETTSE AAARETLEEAGARVEVQNLYTLLNVPHVHQVHLFYLARLLDLDVEAGEESLEVRLFEEHEIPWGDIAFPTVAQTLRFFFT DRTSGNYGLHTGDIFRSLRDG >Mature_181_residues MKFCSVCGHAVGLSIPPGDNRERFVCASCGTVHYQNPRNVVGTVPVWDDKVLLCRRAIEPRYGYWTLPAGFMEMGETTSE AAARETLEEAGARVEVQNLYTLLNVPHVHQVHLFYLARLLDLDVEAGEESLEVRLFEEHEIPWGDIAFPTVAQTLRFFFT DRTSGNYGLHTGDIFRSLRDG
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 20403; Mature: 20403
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFCSVCGHAVGLSIPPGDNRERFVCASCGTVHYQNPRNVVGTVPVWDDKVLLCRRAIEP CCHHHHCCHHHCCCCCCCCCCCEEEEECCCEEEECCCCCCEEECCCCCCHHHHHHHHCCC RYGYWTLPAGFMEMGETTSEAAARETLEEAGARVEVQNLYTLLNVPHVHQVHLFYLARLL CCCEEECCHHHHHHCCCHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCHHHHHHHHHHHHH DLDVEAGEESLEVRLFEEHEIPWGDIAFPTVAQTLRFFFTDRTSGNYGLHTGDIFRSLRD HCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC G C >Mature Secondary Structure MKFCSVCGHAVGLSIPPGDNRERFVCASCGTVHYQNPRNVVGTVPVWDDKVLLCRRAIEP CCHHHHCCHHHCCCCCCCCCCCEEEEECCCEEEECCCCCCEEECCCCCCHHHHHHHHCCC RYGYWTLPAGFMEMGETTSEAAARETLEEAGARVEVQNLYTLLNVPHVHQVHLFYLARLL CCCEEECCHHHHHHCCCHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCHHHHHHHHHHHHH DLDVEAGEESLEVRLFEEHEIPWGDIAFPTVAQTLRFFFTDRTSGNYGLHTGDIFRSLRD HCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; H2O [C]
Specific reaction: NADH + H2O = AMP + NMNH. [C]
General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA