| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is crt [H]
Identifier: 186476410
GI number: 186476410
Start: 1870245
End: 1871375
Strand: Reverse
Name: crt [H]
Synonym: Bphy_1652
Alternate gene names: 186476410
Gene position: 1871375-1870245 (Counterclockwise)
Preceding gene: 186476411
Following gene: 186476407
Centisome position: 53.79
GC content: 65.69
Gene sequence:
>1131_bases ATGTCGACATCCGAACCGCGCCTCGCCTCCGACGAACTCATCGCCTATGTCGCCAACGGCATCGGTTTCATCGAGCTGAA CCGGCCGAAGGCGCTCAATGCGCTGTCGCTGGACATGATGCGCGCGATGCAGGCGGCGCTCGACCAATGGCGCGACGAGC CCGGCGTGCTTGCCGTCGTCGTGCGCAGCACGAGCGAACGTGCGTTCTGTGCGGGCGGCGACATCCGCTATCTGTACGAC GCGTTTCGGCGCGGCGACGGTGATGCCGTGGACACGTTCTTCATCGACGAGTACCGGCTCGATCACGCGATCTTCACATA CACGAAACCGTATATCGCGTTGATGAACGGCATCGTGATGGGCGGCGGCATGGGTATTTCGCAAGGCGCGCACCGGACGG GTGGTTTGCGCGTCGTGACGTCGTCGACACGTATGGCGATGCCGGAAACGCGCATCGGTTTGTTTCCCGATGTCGGCGCC GGATGGTTTCTCGCGCGAACGCCGGGTGCGATCGGCCGCTATCTGGCGGTGACGGGCACGACGATCGGCGCCGCCGATGC ACTTTACGCGGGTCTCGCCGACGCGTATCTGCCCGACGAAGTCATCCCCGCGCTGATCGATCGCCTGAAGTCGCAGACGT TCGAGCAGGGCGCGGAAGTGGTGGCGTGCGTGCGGCAGGAAGCGGACGCGCATCGGGTCACGCCGTTGCCCGACGTCTCG CCGCTCGCCGATGCCCGCATGCTGATCGACAAACACTTCGCGCGGGCGGACGTCGCGCAGATCATCCGTTCACTCGACCT CGAAGGTGATTGCGCCTATGCCGACTGGGCGGAGCAGGCGGGCGCGATGCTGCGCGAGCGTTCGCCGCTGTCGATGGCGG TATCGCTGGAAGTGGTGACGCGCGCCGAAGGCACAATGGCCGAGTGCCTGCGCCGCGATCTCGATCTGACGCGTTCGTCG TTCGAACGCGGCGACGCGCCGGAAGGCATCCGCGCGCGCATCATCGACAAGGACAACCAGCCGCACTGGCGCTTTGCGCG AATCGAAGACGTGAAGCGCGCGGACGTCGACGCGATGTTCGACAGCCCGTGGCCCGCGAACGAACATCCGCTGCGGGATC TGCAAGGCTGA
Upstream 100 bases:
>100_bases AACGCGGGCCACCCGTTGCGCTGCCGGTTTTACTGAACAAGTCGATGACGCGTGTTACCGTTGGCGTCGCATCTCCATCG AACCGCTTCACACCCACGCC
Downstream 100 bases:
>100_bases CGCGAAGAAGCGGGAAAACGCCGTAACGAAGCTGAAAAGAAGCGCAGAGGCAGCAGATGCGGGTGGGGCGCTCAGTTCTC GCTCGCCATGAAGGCGCGCA
Product: 3-hydroxyisobutyryl-CoA hydrolase
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MSTSEPRLASDELIAYVANGIGFIELNRPKALNALSLDMMRAMQAALDQWRDEPGVLAVVVRSTSERAFCAGGDIRYLYD AFRRGDGDAVDTFFIDEYRLDHAIFTYTKPYIALMNGIVMGGGMGISQGAHRTGGLRVVTSSTRMAMPETRIGLFPDVGA GWFLARTPGAIGRYLAVTGTTIGAADALYAGLADAYLPDEVIPALIDRLKSQTFEQGAEVVACVRQEADAHRVTPLPDVS PLADARMLIDKHFARADVAQIIRSLDLEGDCAYADWAEQAGAMLRERSPLSMAVSLEVVTRAEGTMAECLRRDLDLTRSS FERGDAPEGIRARIIDKDNQPHWRFARIEDVKRADVDAMFDSPWPANEHPLRDLQG
Sequences:
>Translated_376_residues MSTSEPRLASDELIAYVANGIGFIELNRPKALNALSLDMMRAMQAALDQWRDEPGVLAVVVRSTSERAFCAGGDIRYLYD AFRRGDGDAVDTFFIDEYRLDHAIFTYTKPYIALMNGIVMGGGMGISQGAHRTGGLRVVTSSTRMAMPETRIGLFPDVGA GWFLARTPGAIGRYLAVTGTTIGAADALYAGLADAYLPDEVIPALIDRLKSQTFEQGAEVVACVRQEADAHRVTPLPDVS PLADARMLIDKHFARADVAQIIRSLDLEGDCAYADWAEQAGAMLRERSPLSMAVSLEVVTRAEGTMAECLRRDLDLTRSS FERGDAPEGIRARIIDKDNQPHWRFARIEDVKRADVDAMFDSPWPANEHPLRDLQG >Mature_375_residues STSEPRLASDELIAYVANGIGFIELNRPKALNALSLDMMRAMQAALDQWRDEPGVLAVVVRSTSERAFCAGGDIRYLYDA FRRGDGDAVDTFFIDEYRLDHAIFTYTKPYIALMNGIVMGGGMGISQGAHRTGGLRVVTSSTRMAMPETRIGLFPDVGAG WFLARTPGAIGRYLAVTGTTIGAADALYAGLADAYLPDEVIPALIDRLKSQTFEQGAEVVACVRQEADAHRVTPLPDVSP LADARMLIDKHFARADVAQIIRSLDLEGDCAYADWAEQAGAMLRERSPLSMAVSLEVVTRAEGTMAECLRRDLDLTRSSF ERGDAPEGIRARIIDKDNQPHWRFARIEDVKRADVDAMFDSPWPANEHPLRDLQG
Specific function: Catalyzes The Reversible Dehydration Of L-Carnitinyl-CoA To Crotobetainyl-CoA. [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=359, Percent_Identity=34.8189415041783, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI37594469, Length=316, Percent_Identity=34.4936708860759, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI194097323, Length=229, Percent_Identity=30.5676855895196, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI221142681, Length=173, Percent_Identity=30.0578034682081, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25144157, Length=375, Percent_Identity=35.7333333333333, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI25144160, Length=375, Percent_Identity=35.7333333333333, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17554946, Length=207, Percent_Identity=29.4685990338164, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17540714, Length=177, Percent_Identity=25.9887005649718, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=344, Percent_Identity=31.6860465116279, Blast_Score=144, Evalue=2e-35, Organism=Drosophila melanogaster, GI28571730, Length=355, Percent_Identity=36.056338028169, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI28571729, Length=355, Percent_Identity=36.056338028169, Blast_Score=207, Evalue=8e-54, Organism=Drosophila melanogaster, GI20129971, Length=190, Percent_Identity=30, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24653477, Length=190, Percent_Identity=30, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24653139, Length=179, Percent_Identity=32.4022346368715, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 41255; Mature: 41124
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSEPRLASDELIAYVANGIGFIELNRPKALNALSLDMMRAMQAALDQWRDEPGVLAVV CCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE VRSTSERAFCAGGDIRYLYDAFRRGDGDAVDTFFIDEYRLDHAIFTYTKPYIALMNGIVM EECCCCCEEECCCCHHHHHHHHHCCCCCEEEEEEEHHHHHCHHHEECCCHHHHHHHHHHC GGGMGISQGAHRTGGLRVVTSSTRMAMPETRIGLFPDVGAGWFLARTPGAIGRYLAVTGT CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCEEEEECC TIGAADALYAGLADAYLPDEVIPALIDRLKSQTFEQGAEVVACVRQEADAHRVTPLPDVS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PLADARMLIDKHFARADVAQIIRSLDLEGDCAYADWAEQAGAMLRERSPLSMAVSLEVVT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEC RAEGTMAECLRRDLDLTRSSFERGDAPEGIRARIIDKDNQPHWRFARIEDVKRADVDAMF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCHHHHC DSPWPANEHPLRDLQG CCCCCCCCCCCHHCCC >Mature Secondary Structure STSEPRLASDELIAYVANGIGFIELNRPKALNALSLDMMRAMQAALDQWRDEPGVLAVV CCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE VRSTSERAFCAGGDIRYLYDAFRRGDGDAVDTFFIDEYRLDHAIFTYTKPYIALMNGIVM EECCCCCEEECCCCHHHHHHHHHCCCCCEEEEEEEHHHHHCHHHEECCCHHHHHHHHHHC GGGMGISQGAHRTGGLRVVTSSTRMAMPETRIGLFPDVGAGWFLARTPGAIGRYLAVTGT CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHCEEEEECC TIGAADALYAGLADAYLPDEVIPALIDRLKSQTFEQGAEVVACVRQEADAHRVTPLPDVS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PLADARMLIDKHFARADVAQIIRSLDLEGDCAYADWAEQAGAMLRERSPLSMAVSLEVVT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEC RAEGTMAECLRRDLDLTRSSFERGDAPEGIRARIIDKDNQPHWRFARIEDVKRADVDAMF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCHHHHC DSPWPANEHPLRDLQG CCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]