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The map label for this gene is 186476376

Identifier: 186476376

GI number: 186476376

Start: 1839561

End: 1839938

Strand: Direct

Name: 186476376

Synonym: Bphy_1618

Alternate gene names: NA

Gene position: 1839561-1839938 (Clockwise)

Preceding gene: 186476375

Following gene: 186476378

Centisome position: 52.87

GC content: 66.4

Gene sequence:

>378_bases
ATGCAAGCATCTGCAATCGACAGAAAACGGCGGCGGCTCTTCACGCTCGCCGCGCTGGGCGCAGTATTGACCGTGGCGGG
CCGCTTCGACGCGCGCGCCGCCGAGCCGCGCGTGATCAAGGTTCACGCGCGCAAGTTCACGTTCACGCCGAATCAGATCA
AGCTCGCGCCCAACGAGAACGTCGTGTTCGAACTGACCGCGCAGGACACGATCATGGGGTTCGCGATCCCGCAATACAAC
GTGCGCGCCGACGTGCCGCCCGGGGCCGTCGTGCGGCTGCCGGCGCAGGCGGGTGCAGCGGGCACCGTCGATTTTCTGTG
CGACATCTTCTGCGGGTCGGGGCACGAGACGATGAACGGGACGATCGTCGTGGGCTGA

Upstream 100 bases:

>100_bases
CGCGGGCTGGGATGGCGGCAGGTGGAAGTCGCGCGGCCGTCGGGCGCGCTCGCGCTCAATGAAATGCCCATCAAGACGTC
ATAACGAGGGGACCACCATC

Downstream 100 bases:

>100_bases
TTCAACCGCTCATGACGCATTCGCCCAATAATCCTTTCGCGCATAGACCTCTTTCAGATAATCGATGAAATAGCGCACTT
TCGCGGGCACATAGCGCTGC

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Family Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MQASAIDRKRRRLFTLAALGAVLTVAGRFDARAAEPRVIKVHARKFTFTPNQIKLAPNENVVFELTAQDTIMGFAIPQYN
VRADVPPGAVVRLPAQAGAAGTVDFLCDIFCGSGHETMNGTIVVG

Sequences:

>Translated_125_residues
MQASAIDRKRRRLFTLAALGAVLTVAGRFDARAAEPRVIKVHARKFTFTPNQIKLAPNENVVFELTAQDTIMGFAIPQYN
VRADVPPGAVVRLPAQAGAAGTVDFLCDIFCGSGHETMNGTIVVG
>Mature_125_residues
MQASAIDRKRRRLFTLAALGAVLTVAGRFDARAAEPRVIKVHARKFTFTPNQIKLAPNENVVFELTAQDTIMGFAIPQYN
VRADVPPGAVVRLPAQAGAAGTVDFLCDIFCGSGHETMNGTIVVG

Specific function: Unknown

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13397; Mature: 13397

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASAIDRKRRRLFTLAALGAVLTVAGRFDARAAEPRVIKVHARKFTFTPNQIKLAPNEN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCCCC
VVFELTAQDTIMGFAIPQYNVRADVPPGAVVRLPAQAGAAGTVDFLCDIFCGSGHETMNG
EEEEEECCCEEEEEECCCCCEEECCCCCCEEEECCCCCCCCCHHHHEEEHCCCCCCCCCC
TIVVG
EEEEC
>Mature Secondary Structure
MQASAIDRKRRRLFTLAALGAVLTVAGRFDARAAEPRVIKVHARKFTFTPNQIKLAPNEN
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCCCC
VVFELTAQDTIMGFAIPQYNVRADVPPGAVVRLPAQAGAAGTVDFLCDIFCGSGHETMNG
EEEEEECCCEEEEEECCCCCEEECCCCCCEEEECCCCCCCCCHHHHEEEHCCCCCCCCCC
TIVVG
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA