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The map label for this gene is yfeT [C]

Identifier: 186476354

GI number: 186476354

Start: 1811518

End: 1812399

Strand: Reverse

Name: yfeT [C]

Synonym: Bphy_1596

Alternate gene names: 186476354

Gene position: 1812399-1811518 (Counterclockwise)

Preceding gene: 186476362

Following gene: 186476353

Centisome position: 52.09

GC content: 61.56

Gene sequence:

>882_bases
ATGCAGGAAGACAGCACAGAAGAGTTGCCCAGCGTCGAAGAATTGATGCAACGCATCGCGGAAAGCTACGAATCGTTGCC
GCGTCAGTTGAAGAGCGTCGCGACATACCTCGAGCAGCACCGTTCCAGCGTGATGGTCGATCGCACCAGCGACATCGCGA
TGAGTTGCGGCGTGCATCCGTCGGCGGTGGTGCGCTTTGCGCAGCGTTTCGGCTTCTCGGGCTTCTCCGATCTGCAGGCC
GTGTTTCGTCAGGCATACACGACCCAGGGTGGCTCGGCGCAAAGCTATCAGCAGCGCATCCGCAAGCTGATCGACGAGAA
GCCGGGGCGCCTGTCGGGCGGCAGCGTTGCGCGCGAGTTCGTGGCGGCGTGCCGCGACGGTCTGGACGAGCTGGAAGGCT
CGCTCGACGACGCGCAGTTCGAGACCGCCGTAAAGATGCTGCAGCAGGCGGACAACATTTATGTAGTCGGCGTGCGGCGC
TCGTTTCCCGTTGCGAGCTACATCGTCTACGCGTTGCAGCACACGCCGAAGCGCGTACATCTCGTGTCGGGCTTCGGCGG
GATGTATCGCGAGCAGATCCGTAGCGTGAAGAAGGGCGACGTCGTGATCGCGATCAGCTTCGCGCCGTATGGCAAGGAAA
CGCAGTACTGCCTGCGCGTCGCGCATCACCACCAGGCGAAGACCCTTGTCATTACGGACAGCCAGCTGTCGCCACTCGCG
CGCTACGCGAGCACGCAACTGTATGTGAAAGAGGGCAGCGCGTTTGCGTTCCGCTCGCTGACCAGCACGATCTGCCTGTG
CCAGGCGCTGTTCATCGCGCTCGCGTACAAGCTGGAATTGAACGTAGAAGAGTCGACAGACACTGGAGGATACGATGACT
GA

Upstream 100 bases:

>100_bases
CTCGGCAACGTCGGGACGGGGCTTTCGCGTTCCCGTGCGCTCCGCGGAGCGCCTTGCGAGGCGCGCTTTTGCGCTGCAAA
AAAAGATAGAGGTCAGGACC

Downstream 100 bases:

>100_bases
AGTGGCAGGCAAGACGATCGATGCAGCCGTGTTCGGCGCAGGGCGCATCGGCAAGATTCATGCGGCCAACCTCGCACGGC
AGCCGGGCGTGCGGCTCAAG

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQEDSTEELPSVEELMQRIAESYESLPRQLKSVATYLEQHRSSVMVDRTSDIAMSCGVHPSAVVRFAQRFGFSGFSDLQA
VFRQAYTTQGGSAQSYQQRIRKLIDEKPGRLSGGSVAREFVAACRDGLDELEGSLDDAQFETAVKMLQQADNIYVVGVRR
SFPVASYIVYALQHTPKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQAKTLVITDSQLSPLA
RYASTQLYVKEGSAFAFRSLTSTICLCQALFIALAYKLELNVEESTDTGGYDD

Sequences:

>Translated_293_residues
MQEDSTEELPSVEELMQRIAESYESLPRQLKSVATYLEQHRSSVMVDRTSDIAMSCGVHPSAVVRFAQRFGFSGFSDLQA
VFRQAYTTQGGSAQSYQQRIRKLIDEKPGRLSGGSVAREFVAACRDGLDELEGSLDDAQFETAVKMLQQADNIYVVGVRR
SFPVASYIVYALQHTPKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQAKTLVITDSQLSPLA
RYASTQLYVKEGSAFAFRSLTSTICLCQALFIALAYKLELNVEESTDTGGYDD
>Mature_293_residues
MQEDSTEELPSVEELMQRIAESYESLPRQLKSVATYLEQHRSSVMVDRTSDIAMSCGVHPSAVVRFAQRFGFSGFSDLQA
VFRQAYTTQGGSAQSYQQRIRKLIDEKPGRLSGGSVAREFVAACRDGLDELEGSLDDAQFETAVKMLQQADNIYVVGVRR
SFPVASYIVYALQHTPKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQAKTLVITDSQLSPLA
RYASTQLYVKEGSAFAFRSLTSTICLCQALFIALAYKLELNVEESTDTGGYDD

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 32598; Mature: 32598

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEDSTEELPSVEELMQRIAESYESLPRQLKSVATYLEQHRSSVMVDRTSDIAMSCGVHP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCCH
SAVVRFAQRFGFSGFSDLQAVFRQAYTTQGGSAQSYQQRIRKLIDEKPGRLSGGSVAREF
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VAACRDGLDELEGSLDDAQFETAVKMLQQADNIYVVGVRRSFPVASYIVYALQHTPKRVH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEE
LVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQAKTLVITDSQLSPLA
EECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHH
RYASTQLYVKEGSAFAFRSLTSTICLCQALFIALAYKLELNVEESTDTGGYDD
HHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECEECCCCCCCCCC
>Mature Secondary Structure
MQEDSTEELPSVEELMQRIAESYESLPRQLKSVATYLEQHRSSVMVDRTSDIAMSCGVHP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCCCH
SAVVRFAQRFGFSGFSDLQAVFRQAYTTQGGSAQSYQQRIRKLIDEKPGRLSGGSVAREF
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
VAACRDGLDELEGSLDDAQFETAVKMLQQADNIYVVGVRRSFPVASYIVYALQHTPKRVH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCEEE
LVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQAKTLVITDSQLSPLA
EECCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHH
RYASTQLYVKEGSAFAFRSLTSTICLCQALFIALAYKLELNVEESTDTGGYDD
HHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]