Click here to switch to the map view.

The map label for this gene is yisS [H]

Identifier: 186476352

GI number: 186476352

Start: 1809484

End: 1810506

Strand: Reverse

Name: yisS [H]

Synonym: Bphy_1594

Alternate gene names: 186476352

Gene position: 1810506-1809484 (Counterclockwise)

Preceding gene: 186476353

Following gene: 186476351

Centisome position: 52.04

GC content: 65.69

Gene sequence:

>1023_bases
ATGCGCGGCGGCCCATTGCGGGTGGGTATCGTCGGTCTCGGCCGCCTTGGCAAGCGGCATGCGGAGAATCTCGCGTACCG
CGTGTCGGGCGCGGCGCTCGTGGCTGCGTGCAGTCCCATCGAGGAGGAGCGCGAGTGGGCGCGCAATGCGCTGCCGGCGC
CGCGCGTGTATGACGACTATCGCGCGTTGCTCGACGACCGCGACGTGGATGCCGTGTGGCTCGTCACGCCGTCCGCGCTG
CACGCGCAGCAGATCGTCGATGCGCTGAACGCAGGCAAACATGTGTTCTGCGAGAAGCCGCTGTCGCTCGATCTCGCCGA
GTGCGAGCGTGTGATTGCCGAGGCCGGGCGCCATCCGCAGTTGCAGGCGACGATCGGCTTCATGCGCCGTTTCGATCCCA
GCTATCGCGACGCATTCGAGAAGATCGAGACGGGCGTGATCGGCAGGCCGTTCCTGGTGCGGTCGCAGACTTGCGATCAG
AACGATCCCGAGGGCTTTTTCGTGCGCTTTGCACCGACGTCGGGCGGCATTTTTCTGGACTGCACGGTGCACGACATTGA
CCTCGCGCGCTGGCTGCTCGGCATGCCAAAGGCGAAGCGCGTGTATGCGACGGGAGTGGTTGCATTGCATGAGGGTCTGC
GCGAATTCGGCGATGTCGACAACGGCGTGGCGATTTGCGAGTTCGAAGGCGGGCGCATGGCGATGTTTTACGCGTCGCGT
ACGCTGGCGCACGGCAACGATACGGGCAGCGAGGTGATCGGCACGGCGGGCTCGCTGTACATCGGCCGCAATGCGCGTCT
CAATCGGGTCGAAATCGCGGACGCGACGGGCATCCGCAACGAATGCACGCCGACGTTCTTCGACCGGTTCGAGGATGCGT
TTCTGCATGAAGCGCGGGCCTTCGTCGCGGCGGTGAGGGAAGGAAAGCAGAGCGGCGCGACGTTGGCGGATGCGATGGAG
GCGACGCGGATCGGTTCTGCGCTGCGCGAGTCGCTGTCGAGCGGGCGGGCAGTCGATGTGTGA

Upstream 100 bases:

>100_bases
GCACGACGGTCGCCGACGGCCTGAAGGCGCTCGAACTCGCCGAAGCCGCGACGCGTTCGTGGCGCGAGGGCCGCGCGGTC
AAACTCAACGAGGCATGTTG

Downstream 100 bases:

>100_bases
TGTATGGAGGCGCGTCCGGGTTTTCGCGGCCTGGGCGCGTTCGGGGCGCTTACGTTAAAATTTTGCCTTCTGCCTGGCGC
TGAGTGCGCCGCTTCGGAAG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MRGGPLRVGIVGLGRLGKRHAENLAYRVSGAALVAACSPIEEEREWARNALPAPRVYDDYRALLDDRDVDAVWLVTPSAL
HAQQIVDALNAGKHVFCEKPLSLDLAECERVIAEAGRHPQLQATIGFMRRFDPSYRDAFEKIETGVIGRPFLVRSQTCDQ
NDPEGFFVRFAPTSGGIFLDCTVHDIDLARWLLGMPKAKRVYATGVVALHEGLREFGDVDNGVAICEFEGGRMAMFYASR
TLAHGNDTGSEVIGTAGSLYIGRNARLNRVEIADATGIRNECTPTFFDRFEDAFLHEARAFVAAVREGKQSGATLADAME
ATRIGSALRESLSSGRAVDV

Sequences:

>Translated_340_residues
MRGGPLRVGIVGLGRLGKRHAENLAYRVSGAALVAACSPIEEEREWARNALPAPRVYDDYRALLDDRDVDAVWLVTPSAL
HAQQIVDALNAGKHVFCEKPLSLDLAECERVIAEAGRHPQLQATIGFMRRFDPSYRDAFEKIETGVIGRPFLVRSQTCDQ
NDPEGFFVRFAPTSGGIFLDCTVHDIDLARWLLGMPKAKRVYATGVVALHEGLREFGDVDNGVAICEFEGGRMAMFYASR
TLAHGNDTGSEVIGTAGSLYIGRNARLNRVEIADATGIRNECTPTFFDRFEDAFLHEARAFVAAVREGKQSGATLADAME
ATRIGSALRESLSSGRAVDV
>Mature_340_residues
MRGGPLRVGIVGLGRLGKRHAENLAYRVSGAALVAACSPIEEEREWARNALPAPRVYDDYRALLDDRDVDAVWLVTPSAL
HAQQIVDALNAGKHVFCEKPLSLDLAECERVIAEAGRHPQLQATIGFMRRFDPSYRDAFEKIETGVIGRPFLVRSQTCDQ
NDPEGFFVRFAPTSGGIFLDCTVHDIDLARWLLGMPKAKRVYATGVVALHEGLREFGDVDNGVAICEFEGGRMAMFYASR
TLAHGNDTGSEVIGTAGSLYIGRNARLNRVEIADATGIRNECTPTFFDRFEDAFLHEARAFVAAVREGKQSGATLADAME
ATRIGSALRESLSSGRAVDV

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=225, Percent_Identity=27.5555555555556, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787307, Length=195, Percent_Identity=29.7435897435897, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581117, Length=292, Percent_Identity=25, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37143; Mature: 37143

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGPLRVGIVGLGRLGKRHAENLAYRVSGAALVAACSPIEEEREWARNALPAPRVYDDY
CCCCCEEEEEEECCHHHHHHHHHHEEEECCCEEEECCCCHHHHHHHHHHCCCCCCHHHHH
RALLDDRDVDAVWLVTPSALHAQQIVDALNAGKHVFCEKPLSLDLAECERVIAEAGRHPQ
HHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCC
LQATIGFMRRFDPSYRDAFEKIETGVIGRPFLVRSQTCDQNDPEGFFVRFAPTSGGIFLD
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEE
CTVHDIDLARWLLGMPKAKRVYATGVVALHEGLREFGDVDNGVAICEFEGGRMAMFYASR
EEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEHH
TLAHGNDTGSEVIGTAGSLYIGRNARLNRVEIADATGIRNECTPTFFDRFEDAFLHEARA
HHCCCCCCCHHHHCCCCCEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
FVAAVREGKQSGATLADAMEATRIGSALRESLSSGRAVDV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRGGPLRVGIVGLGRLGKRHAENLAYRVSGAALVAACSPIEEEREWARNALPAPRVYDDY
CCCCCEEEEEEECCHHHHHHHHHHEEEECCCEEEECCCCHHHHHHHHHHCCCCCCHHHHH
RALLDDRDVDAVWLVTPSALHAQQIVDALNAGKHVFCEKPLSLDLAECERVIAEAGRHPQ
HHHHCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCC
LQATIGFMRRFDPSYRDAFEKIETGVIGRPFLVRSQTCDQNDPEGFFVRFAPTSGGIFLD
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEE
CTVHDIDLARWLLGMPKAKRVYATGVVALHEGLREFGDVDNGVAICEFEGGRMAMFYASR
EEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEHH
TLAHGNDTGSEVIGTAGSLYIGRNARLNRVEIADATGIRNECTPTFFDRFEDAFLHEARA
HHCCCCCCCHHHHCCCCCEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
FVAAVREGKQSGATLADAMEATRIGSALRESLSSGRAVDV
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]