| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476300
Identifier: 186476300
GI number: 186476300
Start: 1743274
End: 1743753
Strand: Direct
Name: 186476300
Synonym: Bphy_1542
Alternate gene names: NA
Gene position: 1743274-1743753 (Clockwise)
Preceding gene: 186476295
Following gene: 186476301
Centisome position: 50.11
GC content: 64.79
Gene sequence:
>480_bases ATGTCCCCTCAAGACTTTCAGCGTCTGATTGCCGGCGTAACGGCACAACTGGACGGCCACCCGCTCGATGGATCGCTCGG CGCCTGGCTGAATGCGACCTGGCCGGCCGGCAGCGCGATGTATGACGCACTGGCCGACGCATGCCGTACGGGTGTCGCCG AAGGCTGGCTGTGCAATCGCGAGCATGGCGGGCTCCGCTTCGGTCGCATCATTAAGCCCTCCCCCGACACGCATGGTTTT TCCGTTGACGTCGTCGACATGCAGGACATGGCCGGTCCGTATCATCTGCACCCGCACGGAGAAATTGACCTGATCATGCC GCTCTCGGACGGCGCGACCTTCGACGGGCATCCCGCCGGCTGGTGCGTCTACGGTCCCGGCAGCGCGCATCGGCCGACGG TTGCGCAGGGTCGGGCGCTCGTGCTGTATCTGCTGCCGCAAGGTGCAATCGAATTCACACGGGACGCGACCACTGTGTGA
Upstream 100 bases:
>100_bases CATGAACTAAGGTGCGTGCCGGCCGGCAATATCTATCTTGCAGGAAGCCAAGGCAACGGAACGCTGTCGCGCCGACGCGC CGGGCCGACAGGAGGCAAGC
Downstream 100 bases:
>100_bases CGTCACGGCGCGTATCGCTCTCATCCTGCATTTCCGTTCCACGCAGACCGCCACTTCGCCGGAGGACACATGCAAGCCTT GCCGGAATCGCCGCCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSPQDFQRLIAGVTAQLDGHPLDGSLGAWLNATWPAGSAMYDALADACRTGVAEGWLCNREHGGLRFGRIIKPSPDTHGF SVDVVDMQDMAGPYHLHPHGEIDLIMPLSDGATFDGHPAGWCVYGPGSAHRPTVAQGRALVLYLLPQGAIEFTRDATTV
Sequences:
>Translated_159_residues MSPQDFQRLIAGVTAQLDGHPLDGSLGAWLNATWPAGSAMYDALADACRTGVAEGWLCNREHGGLRFGRIIKPSPDTHGF SVDVVDMQDMAGPYHLHPHGEIDLIMPLSDGATFDGHPAGWCVYGPGSAHRPTVAQGRALVLYLLPQGAIEFTRDATTV >Mature_158_residues SPQDFQRLIAGVTAQLDGHPLDGSLGAWLNATWPAGSAMYDALADACRTGVAEGWLCNREHGGLRFGRIIKPSPDTHGFS VDVVDMQDMAGPYHLHPHGEIDLIMPLSDGATFDGHPAGWCVYGPGSAHRPTVAQGRALVLYLLPQGAIEFTRDATTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16975; Mature: 16844
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQDFQRLIAGVTAQLDGHPLDGSLGAWLNATWPAGSAMYDALADACRTGVAEGWLCNR CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEC EHGGLRFGRIIKPSPDTHGFSVDVVDMQDMAGPYHLHPHGEIDLIMPLSDGATFDGHPAG CCCCEEECEEECCCCCCCCEEEEEEEHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCC WCVYGPGSAHRPTVAQGRALVLYLLPQGAIEFTRDATTV EEEECCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCC >Mature Secondary Structure SPQDFQRLIAGVTAQLDGHPLDGSLGAWLNATWPAGSAMYDALADACRTGVAEGWLCNR CHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEC EHGGLRFGRIIKPSPDTHGFSVDVVDMQDMAGPYHLHPHGEIDLIMPLSDGATFDGHPAG CCCCEEECEEECCCCCCCCEEEEEEEHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCC WCVYGPGSAHRPTVAQGRALVLYLLPQGAIEFTRDATTV EEEECCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA