| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is lutP [H]
Identifier: 186476279
GI number: 186476279
Start: 1715909
End: 1717507
Strand: Direct
Name: lutP [H]
Synonym: Bphy_1521
Alternate gene names: 186476279
Gene position: 1715909-1717507 (Clockwise)
Preceding gene: 186476278
Following gene: 186476280
Centisome position: 49.32
GC content: 62.29
Gene sequence:
>1599_bases ATGTTTCACCAGTTATTGACGCCCATCGGCAACTCGCTGTTGCCGTCGTTCATCGTTGCCGCCTTGCCTATCATCGTCGT GCTCGTGCTGCTTGGGTGGGCGCGGCGCCCGGCATGGCAGGCCTCGCTCGCGGGTCTTGCAGTCGGCCTGCTGATCGCGA TTTTCGGCTGGCACTTCCCCATTGGTCTCGCGCTCAATTCCGTCGCTGCCGGCGCCGTGTTCGCGTGCTGGCCCGTGATG TGGATCGTCGTGACGGCGATCCTGCTCTACAACATCGCGCAGTATTCGGGACGCTTCGCGGCCTTCCGCATGTGGATGAT CGACAATCTGCCGAACGACCGGCGCATCGTATTGGTCGTAATCGGCTTTTCGTTCGGCGCGCTGTTCGAAGGCATCTCCG GCTTCGGCACGCCGATCGCGATCACCAGTTCTCTGCTGATCCTGCTCGGTTTCCCCGCTCTCGAAGCGCTGACCTTCACG CTGATCTTCAACACGGCGCCCGTCGCGTTTGGGGCGCTCGGCGTGCCTATCACGGTGCTCGGCGCAGTCACGCACCTGCC CACCGATGCCCTCGCCAAGATGGTCGGCCGGCAGTTGCCGTTCTTCGCGCTGATGCTGCCGTTCTACGTGATCGGCGTAT ACGCGGGCTTTCGCAATATGCTGCGTGTGTGGCCCGTGCTGCTCGTGTCGGGCGGCAGCTTCGCGCTCACACAGTTCGTC ACGTCCAACTTCATCAACTACAGCCTGACGGACGTGCTGTCGTCGCTGGTGTCGCTGATCCTGACCATCGCCTTCCTGCG CGTCTGGCGCCCCGCCGTCGATCCCGCGTTCGCGATCAACGTCGATCGCGTGAACGAGACGCGCGGCAAGATCACGGGCA CGCAGGGCTGGTATCCGTGGCTGATCGTGTCCGCCGTCGTGATCGTCTGGACGATTGCGAAGATCTTCATGATCGGCGAC GTGAAGGTGCCGTGGCCGGGTCTCGACAAAGCCGTCTACATCACGCTGTACAACACACCGTACGGCGCGATCTGGGACTT CCAGCCGCTCGCGACAGGCACGGCGATCCTCGTAGCGGCGATTATCACGGCACTCGTCGTGAAGCTGTCAGTAGCCGACT TCGGGCGCGCGATCGTCGATACCTGGGTGCAGACGCGCATCGCCATTCTCACGGTGGCCACCATTGTCGGCCTCGCGTAC CTGATGAATTACTCAGGGATGAATTACACGCTGGGGCTCGGCGTGGCGTCCGTCGGGGCGCTCTTTCCGCTGGTGTCGGC GTTCCTCGGCTGGGTGGCCGTATTCCTGTCGGGGAGCGACACGTCGGGTAACGCACTGTTCGGCAATCTGCAGGTGGTGG CCGCCAATCAGCTGAACCTGAACCCCGTGCTGATGGCCGCGACGAACTCGTCGGGCGGCGTAATGGGCAAGATGATCTCA CCGCAGAACATCTCGACGGGCGTCGCGACAACCGATCTCAAAGGCAAGGAAGGCTATGTGTTCGCGAAGACCTTCAAGCA TTCGATCCTGCTGACCGTCCTGCTCGGCATTCTCGTGTGGCTGCAGCAGAACGTGCTGCAATGGATGATTCCGCATTGA
Upstream 100 bases:
>100_bases TCCGCTGCGCGGCGGCCACAGCCTTCATCCGTCCAGCCCTGCCGCTTCGCCGCGTAGGCGCAGTCTTCGCGTCGAATCGA ACAACAACGAAGGAGACGTG
Downstream 100 bases:
>100_bases CGAGCACTGCCGAAGCGGGCGCGATCCACGCACGCCCGCTTCGCTGTACGTACGTGCGCGCGACGCGCATGCGCGATAAA CCGCATCCCCGCCGGCCGGT
Product: L-lactate transport
Products: lactate [Cytoplasm]; Proton [Cytoplasm]; glycolate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MFHQLLTPIGNSLLPSFIVAALPIIVVLVLLGWARRPAWQASLAGLAVGLLIAIFGWHFPIGLALNSVAAGAVFACWPVM WIVVTAILLYNIAQYSGRFAAFRMWMIDNLPNDRRIVLVVIGFSFGALFEGISGFGTPIAITSSLLILLGFPALEALTFT LIFNTAPVAFGALGVPITVLGAVTHLPTDALAKMVGRQLPFFALMLPFYVIGVYAGFRNMLRVWPVLLVSGGSFALTQFV TSNFINYSLTDVLSSLVSLILTIAFLRVWRPAVDPAFAINVDRVNETRGKITGTQGWYPWLIVSAVVIVWTIAKIFMIGD VKVPWPGLDKAVYITLYNTPYGAIWDFQPLATGTAILVAAIITALVVKLSVADFGRAIVDTWVQTRIAILTVATIVGLAY LMNYSGMNYTLGLGVASVGALFPLVSAFLGWVAVFLSGSDTSGNALFGNLQVVAANQLNLNPVLMAATNSSGGVMGKMIS PQNISTGVATTDLKGKEGYVFAKTFKHSILLTVLLGILVWLQQNVLQWMIPH
Sequences:
>Translated_532_residues MFHQLLTPIGNSLLPSFIVAALPIIVVLVLLGWARRPAWQASLAGLAVGLLIAIFGWHFPIGLALNSVAAGAVFACWPVM WIVVTAILLYNIAQYSGRFAAFRMWMIDNLPNDRRIVLVVIGFSFGALFEGISGFGTPIAITSSLLILLGFPALEALTFT LIFNTAPVAFGALGVPITVLGAVTHLPTDALAKMVGRQLPFFALMLPFYVIGVYAGFRNMLRVWPVLLVSGGSFALTQFV TSNFINYSLTDVLSSLVSLILTIAFLRVWRPAVDPAFAINVDRVNETRGKITGTQGWYPWLIVSAVVIVWTIAKIFMIGD VKVPWPGLDKAVYITLYNTPYGAIWDFQPLATGTAILVAAIITALVVKLSVADFGRAIVDTWVQTRIAILTVATIVGLAY LMNYSGMNYTLGLGVASVGALFPLVSAFLGWVAVFLSGSDTSGNALFGNLQVVAANQLNLNPVLMAATNSSGGVMGKMIS PQNISTGVATTDLKGKEGYVFAKTFKHSILLTVLLGILVWLQQNVLQWMIPH >Mature_532_residues MFHQLLTPIGNSLLPSFIVAALPIIVVLVLLGWARRPAWQASLAGLAVGLLIAIFGWHFPIGLALNSVAAGAVFACWPVM WIVVTAILLYNIAQYSGRFAAFRMWMIDNLPNDRRIVLVVIGFSFGALFEGISGFGTPIAITSSLLILLGFPALEALTFT LIFNTAPVAFGALGVPITVLGAVTHLPTDALAKMVGRQLPFFALMLPFYVIGVYAGFRNMLRVWPVLLVSGGSFALTQFV TSNFINYSLTDVLSSLVSLILTIAFLRVWRPAVDPAFAINVDRVNETRGKITGTQGWYPWLIVSAVVIVWTIAKIFMIGD VKVPWPGLDKAVYITLYNTPYGAIWDFQPLATGTAILVAAIITALVVKLSVADFGRAIVDTWVQTRIAILTVATIVGLAY LMNYSGMNYTLGLGVASVGALFPLVSAFLGWVAVFLSGSDTSGNALFGNLQVVAANQLNLNPVLMAATNSSGGVMGKMIS PQNISTGVATTDLKGKEGYVFAKTFKHSILLTVLLGILVWLQQNVLQWMIPH
Specific function: Is the principal permease for the uptake of L-lactate in B.subtilis [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1789347, Length=558, Percent_Identity=40.3225806451613, Blast_Score=352, Evalue=5e-98, Organism=Escherichia coli, GI1790031, Length=551, Percent_Identity=38.8384754990926, Blast_Score=340, Evalue=1e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 57240; Mature: 57240
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHQLLTPIGNSLLPSFIVAALPIIVVLVLLGWARRPAWQASLAGLAVGLLIAIFGWHFP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH IGLALNSVAAGAVFACWPVMWIVVTAILLYNIAQYSGRFAAFRMWMIDNLPNDRRIVLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEE IGFSFGALFEGISGFGTPIAITSSLLILLGFPALEALTFTLIFNTAPVAFGALGVPITVL ECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHH GAVTHLPTDALAKMVGRQLPFFALMLPFYVIGVYAGFRNMLRVWPVLLVSGGSFALTQFV HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TSNFINYSLTDVLSSLVSLILTIAFLRVWRPAVDPAFAINVDRVNETRGKITGTQGWYPW HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCHHH LIVSAVVIVWTIAKIFMIGDVKVPWPGLDKAVYITLYNTPYGAIWDFQPLATGTAILVAA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHH IITALVVKLSVADFGRAIVDTWVQTRIAILTVATIVGLAYLMNYSGMNYTLGLGVASVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH LFPLVSAFLGWVAVFLSGSDTSGNALFGNLQVVAANQLNLNPVLMAATNSSGGVMGKMIS HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCEEEECCC PQNISTGVATTDLKGKEGYVFAKTFKHSILLTVLLGILVWLQQNVLQWMIPH CCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFHQLLTPIGNSLLPSFIVAALPIIVVLVLLGWARRPAWQASLAGLAVGLLIAIFGWHFP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH IGLALNSVAAGAVFACWPVMWIVVTAILLYNIAQYSGRFAAFRMWMIDNLPNDRRIVLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEE IGFSFGALFEGISGFGTPIAITSSLLILLGFPALEALTFTLIFNTAPVAFGALGVPITVL ECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCHHHHH GAVTHLPTDALAKMVGRQLPFFALMLPFYVIGVYAGFRNMLRVWPVLLVSGGSFALTQFV HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TSNFINYSLTDVLSSLVSLILTIAFLRVWRPAVDPAFAINVDRVNETRGKITGTQGWYPW HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCHHH LIVSAVVIVWTIAKIFMIGDVKVPWPGLDKAVYITLYNTPYGAIWDFQPLATGTAILVAA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHH IITALVVKLSVADFGRAIVDTWVQTRIAILTVATIVGLAYLMNYSGMNYTLGLGVASVGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH LFPLVSAFLGWVAVFLSGSDTSGNALFGNLQVVAANQLNLNPVLMAATNSSGGVMGKMIS HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCEEEECCC PQNISTGVATTDLKGKEGYVFAKTFKHSILLTVLLGILVWLQQNVLQWMIPH CCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: lactate [Periplasm]; Proton [Periplasm]; glycolate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] Proton [Periplasm] + glycolate [Periplasm] = Proton [Cytoplasm] + glycolate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 8969506 [H]