| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476267
Identifier: 186476267
GI number: 186476267
Start: 1703797
End: 1704342
Strand: Reverse
Name: 186476267
Synonym: Bphy_1509
Alternate gene names: NA
Gene position: 1704342-1703797 (Counterclockwise)
Preceding gene: 186476268
Following gene: 186476266
Centisome position: 48.99
GC content: 59.34
Gene sequence:
>546_bases ATGTCGAAGTTATCGAAAGGCGAGTTCGTGATGGATCTCGAACGCATCCGTGAACGGGCCCGCAAGGATATGGGCGAAGG TCCCGTCACGTCGACCTACGGCGCAGATCGCGACACCGTGCTCAAGCTGCTCAACGGCGCGCTCGCCACCGAGCTGGTGT GCACGCTGCGCTACAAGCGCCACTACTTCATGGCGAAAGGCATCAATTCCGAAGCCGTCGCACAAGAGTTTCTCGAGCAC GCAAACGAAGAGCAGCAGCACGCCGATACGCTCGCTGCGCGCATCGTGCAGCTGGGCGGCGAACCCGATTTCGCGCCGAA CAGTCTGACGGCGCGTTCGCATTCCGAATACAAGGAAGGCAACGGGCTAACCGACATGATTCGCGAGAACCTGATCGCGG AGCGCATCGCAATCGATACGTACCGCGAAATCATCCGTTATCTCGGTGATGGCGATGTGACGACGCGGCGTATCTTCGAA GAGATTCTGGCCGTCGAGGAAGAACACGCGGACGACATGGCCGATCTGTTGACGGGCCGCGAATAA
Upstream 100 bases:
>100_bases ATAGCGCAGTCACCACGCCGAGGCGCGCGCCGATACGCCGCGCGGCATAGCCGGCTGCAGCGTGCGCATTTCCCACACTA CCGGTACAAGGAGTCAGTCA
Downstream 100 bases:
>100_bases GCGGCTGATTGATGCCTGGCGCGAACGCTGCGAGCGGCATGCATGTGTGCCGCTGCACGTTCGGCCGTCAGCGCGTTCCT GCTTTTTCACTGCGTTGAGC
Product: Ferritin Dps family protein
Products: NA
Alternate protein names: Bacterioferritin; Ferritin And Dps; Ferritin-Like Domain Subfamily; Bacterioferritin-Like Domain-Containing Protein; Rubrerythrin Family Protein; RubrerythrinFerritin And Dps
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSKLSKGEFVMDLERIRERARKDMGEGPVTSTYGADRDTVLKLLNGALATELVCTLRYKRHYFMAKGINSEAVAQEFLEH ANEEQQHADTLAARIVQLGGEPDFAPNSLTARSHSEYKEGNGLTDMIRENLIAERIAIDTYREIIRYLGDGDVTTRRIFE EILAVEEEHADDMADLLTGRE
Sequences:
>Translated_181_residues MSKLSKGEFVMDLERIRERARKDMGEGPVTSTYGADRDTVLKLLNGALATELVCTLRYKRHYFMAKGINSEAVAQEFLEH ANEEQQHADTLAARIVQLGGEPDFAPNSLTARSHSEYKEGNGLTDMIRENLIAERIAIDTYREIIRYLGDGDVTTRRIFE EILAVEEEHADDMADLLTGRE >Mature_180_residues SKLSKGEFVMDLERIRERARKDMGEGPVTSTYGADRDTVLKLLNGALATELVCTLRYKRHYFMAKGINSEAVAQEFLEHA NEEQQHADTLAARIVQLGGEPDFAPNSLTARSHSEYKEGNGLTDMIRENLIAERIAIDTYREIIRYLGDGDVTTRRIFEE ILAVEEEHADDMADLLTGRE
Specific function: Unknown
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20449; Mature: 20318
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSKGEFVMDLERIRERARKDMGEGPVTSTYGADRDTVLKLLNGALATELVCTLRYKR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HYFMAKGINSEAVAQEFLEHANEEQQHADTLAARIVQLGGEPDFAPNSLTARSHSEYKEG HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC NGLTDMIRENLIAERIAIDTYREIIRYLGDGDVTTRRIFEEILAVEEEHADDMADLLTGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC E C >Mature Secondary Structure SKLSKGEFVMDLERIRERARKDMGEGPVTSTYGADRDTVLKLLNGALATELVCTLRYKR CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HYFMAKGINSEAVAQEFLEHANEEQQHADTLAARIVQLGGEPDFAPNSLTARSHSEYKEG HHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC NGLTDMIRENLIAERIAIDTYREIIRYLGDGDVTTRRIFEEILAVEEEHADDMADLLTGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA