Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476244

Identifier: 186476244

GI number: 186476244

Start: 1677345

End: 1678358

Strand: Reverse

Name: 186476244

Synonym: Bphy_1486

Alternate gene names: NA

Gene position: 1678358-1677345 (Counterclockwise)

Preceding gene: 186476246

Following gene: 186476243

Centisome position: 48.24

GC content: 61.64

Gene sequence:

>1014_bases
ATGCGCAAATTTTCCCTTCCCGGCTTGACTGGCACGTTTGCAGCAGGCGCGGCGTTCGTCGCGGCAGCGAGCTTTTTCTC
TCCCGCCGTCCATGCCAACAACGTGATCGTGCTCAATTCCGGCGAAGCGACACTGAGCCTGATCGACGAGGCGACGCACC
AGGTGGTCGACACCGTGCCGACGGGCAAGGAACCGCACCACCTGATGCCCACGCCGGACAATGCCTCGCTGATCGTCGCG
AACTCGGTGTCGAACAGTCTGATGTTCGTCGATCCAAAGACGGGCAAGCCGCAGCGCTGGGTCGAAAACGTCGAAGACCC
GTATCAGATCGGTTTTTCGCCGGATCACAAGTGGCTCGTGACGACGGGGCTGCGCCTCGACCGCCTCGACATCTATCACT
ACGACGGCCATAACATGACGCTCGCGAGTCGCTTGCCGCTCGCTGTGATGCCGAGCCACATCGCGTTCACGAACGACAGC
AAGACGGTGTTCATTACGTTGCAGGTGTCGGGCGAACTCGCTGCCATCGATCTCGCCACGCAGACGGTCAAGTGGAAGAT
GAAGGTCGGCAAGGTGCCAGCCGGCCTGTGGATGACGCCGGGCGACAAATACCTGCTGATCGGCATGACAGGCGCGGATT
ACGTCGCCGTGGTCGACTGGCGCACCCAGAAGATCGTGAAGACGATCACGACGGGCAAGGGCGCGCACAATTTCCGTTCG
CTCGCGGATGGCAAGCATGTCGCCGTGTCGAACCGGGTGGCGAGCACGATCAGCATCATCGACGAAGACACGCTCACCAA
CGTCGGCGATATCACGGGCCTGATGCCGGGACCCGACGACATGGAACTTTCCGCCGACAAACGCTATCTGTGGGTAACGT
TCCGTTTCGCGAAGCACGTGGGCGTCATCGACCTGAGCACGCGCAAGCTGATCCAGACGATCGCTGTCGGCCGCTCGCCG
CACGGCATCTATTTTTTCAACCGCGCGCCCGTCACCGCGCCGAACGGGGCGTAA

Upstream 100 bases:

>100_bases
GCGGCAGCGCGCCGCGAGCCCACATTTTTCCTCGACCGAGGTCAACCGTTGCATCGCGCAAACGTTCTACAATGGCGGTC
ATCCCCTGATGTGAGTCTTC

Downstream 100 bases:

>100_bases
CGCGTAACGCGTGACGCAGCGGCGGCGCGCCTTGCCGGCGCGCCGCACAGTGACGCAGAACATCGACGCATATAGAGCCA
CATGTTCCACCTGATCGCTT

Product: YVTN beta-propeller repeat-containing protein

Products: NA

Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Cell Surface Protein; Beta-Propeller Repeat-Containing Protein; Beta-Propeller Fold Protein; Cytochrome D1 Heme Region; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; Surface Layer Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; YVTN Beta-Propeller Repeat Family Protein; YVTN Family Beta-Propeller Repeat Protein; PGRS-Subfamily Gly-Rich Protein; IPT/TIG Domain Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Signal Peptide; Surface Antigen-Like Protein; Surface Antigen; Cytochrome D1 Heme Subunit; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; Yvtn Beta-Propeller Repeat Family Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Secreted Protein; Lipoprotein; Exported Protein; YVTN Family Beta-Propeller Repeat Family Protein

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRKFSLPGLTGTFAAGAAFVAAASFFSPAVHANNVIVLNSGEATLSLIDEATHQVVDTVPTGKEPHHLMPTPDNASLIVA
NSVSNSLMFVDPKTGKPQRWVENVEDPYQIGFSPDHKWLVTTGLRLDRLDIYHYDGHNMTLASRLPLAVMPSHIAFTNDS
KTVFITLQVSGELAAIDLATQTVKWKMKVGKVPAGLWMTPGDKYLLIGMTGADYVAVVDWRTQKIVKTITTGKGAHNFRS
LADGKHVAVSNRVASTISIIDEDTLTNVGDITGLMPGPDDMELSADKRYLWVTFRFAKHVGVIDLSTRKLIQTIAVGRSP
HGIYFFNRAPVTAPNGA

Sequences:

>Translated_337_residues
MRKFSLPGLTGTFAAGAAFVAAASFFSPAVHANNVIVLNSGEATLSLIDEATHQVVDTVPTGKEPHHLMPTPDNASLIVA
NSVSNSLMFVDPKTGKPQRWVENVEDPYQIGFSPDHKWLVTTGLRLDRLDIYHYDGHNMTLASRLPLAVMPSHIAFTNDS
KTVFITLQVSGELAAIDLATQTVKWKMKVGKVPAGLWMTPGDKYLLIGMTGADYVAVVDWRTQKIVKTITTGKGAHNFRS
LADGKHVAVSNRVASTISIIDEDTLTNVGDITGLMPGPDDMELSADKRYLWVTFRFAKHVGVIDLSTRKLIQTIAVGRSP
HGIYFFNRAPVTAPNGA
>Mature_337_residues
MRKFSLPGLTGTFAAGAAFVAAASFFSPAVHANNVIVLNSGEATLSLIDEATHQVVDTVPTGKEPHHLMPTPDNASLIVA
NSVSNSLMFVDPKTGKPQRWVENVEDPYQIGFSPDHKWLVTTGLRLDRLDIYHYDGHNMTLASRLPLAVMPSHIAFTNDS
KTVFITLQVSGELAAIDLATQTVKWKMKVGKVPAGLWMTPGDKYLLIGMTGADYVAVVDWRTQKIVKTITTGKGAHNFRS
LADGKHVAVSNRVASTISIIDEDTLTNVGDITGLMPGPDDMELSADKRYLWVTFRFAKHVGVIDLSTRKLIQTIAVGRSP
HGIYFFNRAPVTAPNGA

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36591; Mature: 36591

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFSLPGLTGTFAAGAAFVAAASFFSPAVHANNVIVLNSGEATLSLIDEATHQVVDTVP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCC
TGKEPHHLMPTPDNASLIVANSVSNSLMFVDPKTGKPQRWVENVEDPYQIGFSPDHKWLV
CCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHCCCCCEEECCCCCCCEEE
TTGLRLDRLDIYHYDGHNMTLASRLPLAVMPSHIAFTNDSKTVFITLQVSGELAAIDLAT
EECCEEEEEEEEEECCCCEEEHHCCCEEECCCEEEEECCCCEEEEEEEECCCEEEEEEEE
QTVKWKMKVGKVPAGLWMTPGDKYLLIGMTGADYVAVVDWRTQKIVKTITTGKGAHNFRS
EEEEEEEEECCCCCCCEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCHHHHH
LADGKHVAVSNRVASTISIIDEDTLTNVGDITGLMPGPDDMELSADKRYLWVTFRFAKHV
HCCCCEEEECCHHHHEEEEECCCCCCCCCHHCCCCCCCCCCEECCCCEEEEEEEEEHHCC
GVIDLSTRKLIQTIAVGRSPHGIYFFNRAPVTAPNGA
CEEEECHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MRKFSLPGLTGTFAAGAAFVAAASFFSPAVHANNVIVLNSGEATLSLIDEATHQVVDTVP
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCC
TGKEPHHLMPTPDNASLIVANSVSNSLMFVDPKTGKPQRWVENVEDPYQIGFSPDHKWLV
CCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHCCCCCEEECCCCCCCEEE
TTGLRLDRLDIYHYDGHNMTLASRLPLAVMPSHIAFTNDSKTVFITLQVSGELAAIDLAT
EECCEEEEEEEEEECCCCEEEHHCCCEEECCCEEEEECCCCEEEEEEEECCCEEEEEEEE
QTVKWKMKVGKVPAGLWMTPGDKYLLIGMTGADYVAVVDWRTQKIVKTITTGKGAHNFRS
EEEEEEEEECCCCCCCEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCHHHHH
LADGKHVAVSNRVASTISIIDEDTLTNVGDITGLMPGPDDMELSADKRYLWVTFRFAKHV
HCCCCEEEECCHHHHEEEEECCCCCCCCCHHCCCCCCCCCCEECCCCEEEEEEEEEHHCC
GVIDLSTRKLIQTIAVGRSPHGIYFFNRAPVTAPNGA
CEEEECHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA