| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476195
Identifier: 186476195
GI number: 186476195
Start: 1616440
End: 1616826
Strand: Direct
Name: 186476195
Synonym: Bphy_1437
Alternate gene names: NA
Gene position: 1616440-1616826 (Clockwise)
Preceding gene: 186476194
Following gene: 186476205
Centisome position: 46.46
GC content: 69.51
Gene sequence:
>387_bases ATGTTCGCCCCTGCCCTGCTGCATTGCGCACATCGACTCGCCCGCACGCTCGCGTTCGCTGCGGGTGTTTCCGCGCTGTC CGGCTGCATGATGGACCCGCCCGGTCCGTCGCCGATTTACAGCCGCTTGCCCGCCGATCAATCCGGCATCGCGGCGACGG CGCAACCGCTGACGCCGGAAGAACGCGCCCGCTACGACGAAATCGACAGACAGGTGATGGCCGAGCAGAACCAGGCGATG GCCGCCGACGCCGCAGCCCAGGCTTATTCGCGCTACGCGGCGCCGCCCGTCTCTGTCTTCGGCAGCTACTCCAGCGGCGG CTGGGGACACGGCTGGAGCACGGGCGTCGGTTACGGCTACGCGCCGGGGTGGGGTTGGGGCTGGTGA
Upstream 100 bases:
>100_bases TCTCGCTTTGGCGCAACGGCGACGCGGTATCATCGGTTAGTGACACTGGGCGCGCGCAATGCCGCCCGATTGTTTAGGTA TCCGACCGATGGAGTTCGAC
Downstream 100 bases:
>100_bases TGCGCATGATGGCGCGAGTCGCGAAAGCAACTCGCCAAAACAAAAGGCGCGGTTCGCATGAACCGCGCCTTGTTCGTAAG GCCGTCGCGCCGGCTTCGCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MFAPALLHCAHRLARTLAFAAGVSALSGCMMDPPGPSPIYSRLPADQSGIAATAQPLTPEERARYDEIDRQVMAEQNQAM AADAAAQAYSRYAAPPVSVFGSYSSGGWGHGWSTGVGYGYAPGWGWGW
Sequences:
>Translated_128_residues MFAPALLHCAHRLARTLAFAAGVSALSGCMMDPPGPSPIYSRLPADQSGIAATAQPLTPEERARYDEIDRQVMAEQNQAM AADAAAQAYSRYAAPPVSVFGSYSSGGWGHGWSTGVGYGYAPGWGWGW >Mature_128_residues MFAPALLHCAHRLARTLAFAAGVSALSGCMMDPPGPSPIYSRLPADQSGIAATAQPLTPEERARYDEIDRQVMAEQNQAM AADAAAQAYSRYAAPPVSVFGSYSSGGWGHGWSTGVGYGYAPGWGWGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13494; Mature: 13494
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAPALLHCAHRLARTLAFAAGVSALSGCMMDPPGPSPIYSRLPADQSGIAATAQPLTPE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHH ERARYDEIDRQVMAEQNQAMAADAAAQAYSRYAAPPVSVFGSYSSGGWGHGWSTGVGYGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCC APGWGWGW CCCCCCCC >Mature Secondary Structure MFAPALLHCAHRLARTLAFAAGVSALSGCMMDPPGPSPIYSRLPADQSGIAATAQPLTPE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHH ERARYDEIDRQVMAEQNQAMAADAAAQAYSRYAAPPVSVFGSYSSGGWGHGWSTGVGYGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCC APGWGWGW CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA