| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476192
Identifier: 186476192
GI number: 186476192
Start: 1613724
End: 1614578
Strand: Reverse
Name: 186476192
Synonym: Bphy_1434
Alternate gene names: NA
Gene position: 1614578-1613724 (Counterclockwise)
Preceding gene: 186476196
Following gene: 186476191
Centisome position: 46.41
GC content: 67.49
Gene sequence:
>855_bases ATGTCTGCCGCCGATACCATCCGTCCTGTTCCCTTCCATTGCGCCCGTTCCGACGCGCTCGCCGTCTTGGCGGAACGTGT CCCCGCCGTGAAAGCCGCGGGGGCGCGGGCGCTTTATGCGCGGGCGCTCGAAGGCGCGGCAGTCGTGTCGCCGCAGCGCG TGCTGGATGAGCCGTCGGGATTGCCGGGCCGACCGGAGCTGCCGGAACTGGTCGAGCCGCGCAAGCTCGGACGGCGCGGC ATGCAGTCGCCGCAGGGGCGCGCGGTGCTGTTGCATGCGCTTGCGCACATCGAGTTCAACGCCATCAATCTCGCGCTCGA CGCCGCGTGGCGTTTCAGCGGTATGCCCGAAGCGTTTTACATCGACTGGCTGAAAGTCGCGTCGGAGGAAGCGCATCACT TTTTGTTGCTGAGCGCGCGGCTGGCGGAATTTGGCCACGCCTACGGCGATTTCCCGGCTCACGATGGCCTGTGGGACATG TGCGAGCGCACCCGAGGCGACGTGCTCGCGCGCATGGCGCTCGTGCCGCGCACGCTCGAGGCGCGTGGGCTCGACGCGTC GCCGCCGATCCGCGCGCGCTTGCAGCAGGCGGGCGATGACGCGTCGGCGGCAATTCTGGACGTGATCCTGCGTGATGAAA TTGGCCACGTGCTGATCGGCAATCGCTGGTTCCGCTATCTGTGCGACCTGAGGGGCGCCGACGCGCATCAGACTTATCTG CGTCTTTCTGACGAGTATCGCGCGCCGAAGCTGCGCGGACCGTTCAATTTCGAGGCGCGCCGCGACGCCGGATTCGAAGA GGAAGAGTTGGCCGCGCTGGCGGGCCTTGAAACGCAGCAGCGCGCGGACGGCTGA
Upstream 100 bases:
>100_bases ATTGTAAACGGTTGTACCAGAAGTCCGTATGAAGCGCGCGCGTGCGCCGCGCCGTGCCAGAATTGCACGTCGTGTGTTTT TTCGTTGCTTGCGTTTGTCG
Downstream 100 bases:
>100_bases CGCGCGGCGTGGGGTTGTCGTCAGCGGCGGCGCGACTATCTCGATATAATCGAACGATCATTCTTTTATGCTCCGAAACA TGGATCGTCCTCTCACGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSAADTIRPVPFHCARSDALAVLAERVPAVKAAGARALYARALEGAAVVSPQRVLDEPSGLPGRPELPELVEPRKLGRRG MQSPQGRAVLLHALAHIEFNAINLALDAAWRFSGMPEAFYIDWLKVASEEAHHFLLLSARLAEFGHAYGDFPAHDGLWDM CERTRGDVLARMALVPRTLEARGLDASPPIRARLQQAGDDASAAILDVILRDEIGHVLIGNRWFRYLCDLRGADAHQTYL RLSDEYRAPKLRGPFNFEARRDAGFEEEELAALAGLETQQRADG
Sequences:
>Translated_284_residues MSAADTIRPVPFHCARSDALAVLAERVPAVKAAGARALYARALEGAAVVSPQRVLDEPSGLPGRPELPELVEPRKLGRRG MQSPQGRAVLLHALAHIEFNAINLALDAAWRFSGMPEAFYIDWLKVASEEAHHFLLLSARLAEFGHAYGDFPAHDGLWDM CERTRGDVLARMALVPRTLEARGLDASPPIRARLQQAGDDASAAILDVILRDEIGHVLIGNRWFRYLCDLRGADAHQTYL RLSDEYRAPKLRGPFNFEARRDAGFEEEELAALAGLETQQRADG >Mature_283_residues SAADTIRPVPFHCARSDALAVLAERVPAVKAAGARALYARALEGAAVVSPQRVLDEPSGLPGRPELPELVEPRKLGRRGM QSPQGRAVLLHALAHIEFNAINLALDAAWRFSGMPEAFYIDWLKVASEEAHHFLLLSARLAEFGHAYGDFPAHDGLWDMC ERTRGDVLARMALVPRTLEARGLDASPPIRARLQQAGDDASAAILDVILRDEIGHVLIGNRWFRYLCDLRGADAHQTYLR LSDEYRAPKLRGPFNFEARRDAGFEEEELAALAGLETQQRADG
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 31272; Mature: 31141
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAADTIRPVPFHCARSDALAVLAERVPAVKAAGARALYARALEGAAVVSPQRVLDEPSG CCCCCCCCCCCCHHCCHHHHHHHHHHCCHHHHCCHHHHHHHHHCCCHHCCCHHHHCCCCC LPGRPELPELVEPRKLGRRGMQSPQGRAVLLHALAHIEFNAINLALDAAWRFSGMPEAFY CCCCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHCCCCCHHHH IDWLKVASEEAHHFLLLSARLAEFGHAYGDFPAHDGLWDMCERTRGDVLARMALVPRTLE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH ARGLDASPPIRARLQQAGDDASAAILDVILRDEIGHVLIGNRWFRYLCDLRGADAHQTYL HCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCCCHHHHHH RLSDEYRAPKLRGPFNFEARRDAGFEEEELAALAGLETQQRADG HCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCC >Mature Secondary Structure SAADTIRPVPFHCARSDALAVLAERVPAVKAAGARALYARALEGAAVVSPQRVLDEPSG CCCCCCCCCCCHHCCHHHHHHHHHHCCHHHHCCHHHHHHHHHCCCHHCCCHHHHCCCCC LPGRPELPELVEPRKLGRRGMQSPQGRAVLLHALAHIEFNAINLALDAAWRFSGMPEAFY CCCCCCCHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEEHHHHCCCCCHHHH IDWLKVASEEAHHFLLLSARLAEFGHAYGDFPAHDGLWDMCERTRGDVLARMALVPRTLE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHH ARGLDASPPIRARLQQAGDDASAAILDVILRDEIGHVLIGNRWFRYLCDLRGADAHQTYL HCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHCCCCCHHHHHH RLSDEYRAPKLRGPFNFEARRDAGFEEEELAALAGLETQQRADG HCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]