| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476191
Identifier: 186476191
GI number: 186476191
Start: 1612748
End: 1613656
Strand: Reverse
Name: 186476191
Synonym: Bphy_1433
Alternate gene names: NA
Gene position: 1613656-1612748 (Counterclockwise)
Preceding gene: 186476192
Following gene: 186476190
Centisome position: 46.38
GC content: 66.45
Gene sequence:
>909_bases ATGCTCCGAAACATGGATCGTCCTCTCACGCCTTCCATTTCCGAATTTCTCACCGTGCGCGGCGTACGACTTCATGTGCG CCGCTGGGGCCGTCCGGATGCGCCGACGCTCTTTATGTTGCACGGCTGGATGGACGTCGCCGCGTCGTTTCAATTCGTCG TCGACGCGCTCGCGGGTGACTGGCAGGTGATCGCGCCCGACGCGCGCGGCTTTGGGCTGTCCGACTGGCCCGTCGCGCAA CGCGGCGGCGGTCATTACTGGTTCCAGGAGTATCTGGCCGACCTCGACGCGCTGCTCGATCACTACGCGCCGGCAGGCGA AGTGAACCTCGTGGGTCACAGCATGGGCGCGAACGTCGTGTGCCTGTACGCGGGCGTGCGCCCGGAGCGCGTGCGGCGGG TGGTCGATCTGGAAGGCTTCGGGCTCGCGCCAGCGAAGGCGGCACATCTGCCGCGCCGTATGGCGTCATGGCTCGACGAG CTGCGCGAGCCGCCGACGCTGCGTCCCTACGCGTCGCTCGACGACGTTGCTGCACGTCTCATCAGGACCAACGCCCGGCT TGCGCCGCAGCGCGCCCGTTTTCTCGCGCAGCACTGGTCGAAGCCGGACGGGACGGGCGGGTATGTGTTGCTTGCCGATC CGGCGCACAAGATCCGCGGGCCGCTGTTGTATCGGCTCGACGAAATCATGGCCGTCTGGGCCAATGTGCGGGCCGGCGTG CTGCATGTCGAAGCCACCGCGTCGCCGACGCTTGCGGCGCTGGCCGGAAATATTCCGCTCGACGAATTCAAGGCGCGGTT TCAGGCGTTCGCCGACTGGCGCGAGGAATTTATCGAGGATGCGGGACACATGGTTCATCACGATCAGCCGGAGCAGGTCG CGGCGCTTATCGAGGCGTTCTGCGCCTAG
Upstream 100 bases:
>100_bases GGCCTTGAAACGCAGCAGCGCGCGGACGGCTGACGCGCGGCGTGGGGTTGTCGTCAGCGGCGGCGCGACTATCTCGATAT AATCGAACGATCATTCTTTT
Downstream 100 bases:
>100_bases TATCTGTCGCGGATTTGCGCCGCCGAATCCTCTGCGTACGCTTACTGCGTTGCAGTAAAATGGGCTGAATCCGCTATCAA GAACATGATGAACGCCGACC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Superfamily Hydrolase; Esterase; Lipase A; Hydrolases Or Acyltransferases; Hydrolase Or Acytransferase; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Lipase LipA; Beta-Ketoacyl Synthase; Hydrolase Or Acetyltransferase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MLRNMDRPLTPSISEFLTVRGVRLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVAQ RGGGHYWFQEYLADLDALLDHYAPAGEVNLVGHSMGANVVCLYAGVRPERVRRVVDLEGFGLAPAKAAHLPRRMASWLDE LREPPTLRPYASLDDVAARLIRTNARLAPQRARFLAQHWSKPDGTGGYVLLADPAHKIRGPLLYRLDEIMAVWANVRAGV LHVEATASPTLAALAGNIPLDEFKARFQAFADWREEFIEDAGHMVHHDQPEQVAALIEAFCA
Sequences:
>Translated_302_residues MLRNMDRPLTPSISEFLTVRGVRLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVAQ RGGGHYWFQEYLADLDALLDHYAPAGEVNLVGHSMGANVVCLYAGVRPERVRRVVDLEGFGLAPAKAAHLPRRMASWLDE LREPPTLRPYASLDDVAARLIRTNARLAPQRARFLAQHWSKPDGTGGYVLLADPAHKIRGPLLYRLDEIMAVWANVRAGV LHVEATASPTLAALAGNIPLDEFKARFQAFADWREEFIEDAGHMVHHDQPEQVAALIEAFCA >Mature_302_residues MLRNMDRPLTPSISEFLTVRGVRLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVAQ RGGGHYWFQEYLADLDALLDHYAPAGEVNLVGHSMGANVVCLYAGVRPERVRRVVDLEGFGLAPAKAAHLPRRMASWLDE LREPPTLRPYASLDDVAARLIRTNARLAPQRARFLAQHWSKPDGTGGYVLLADPAHKIRGPLLYRLDEIMAVWANVRAGV LHVEATASPTLAALAGNIPLDEFKARFQAFADWREEFIEDAGHMVHHDQPEQVAALIEAFCA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33622; Mature: 33622
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRNMDRPLTPSISEFLTVRGVRLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGD CCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCC WQVIAPDARGFGLSDWPVAQRGGGHYWFQEYLADLDALLDHYAPAGEVNLVGHSMGANVV CEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEE CLYAGVRPERVRRVVDLEGFGLAPAKAAHLPRRMASWLDELREPPTLRPYASLDDVAARL EEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IRTNARLAPQRARFLAQHWSKPDGTGGYVLLADPAHKIRGPLLYRLDEIMAVWANVRAGV HHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCE LHVEATASPTLAALAGNIPLDEFKARFQAFADWREEFIEDAGHMVHHDQPEQVAALIEAF EEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CA CC >Mature Secondary Structure MLRNMDRPLTPSISEFLTVRGVRLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGD CCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCC WQVIAPDARGFGLSDWPVAQRGGGHYWFQEYLADLDALLDHYAPAGEVNLVGHSMGANVV CEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEE CLYAGVRPERVRRVVDLEGFGLAPAKAAHLPRRMASWLDELREPPTLRPYASLDDVAARL EEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH IRTNARLAPQRARFLAQHWSKPDGTGGYVLLADPAHKIRGPLLYRLDEIMAVWANVRAGV HHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCE LHVEATASPTLAALAGNIPLDEFKARFQAFADWREEFIEDAGHMVHHDQPEQVAALIEAF EEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH CA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA