| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is lplT [H]
Identifier: 186476156
GI number: 186476156
Start: 1570419
End: 1571717
Strand: Direct
Name: lplT [H]
Synonym: Bphy_1398
Alternate gene names: 186476156
Gene position: 1570419-1571717 (Clockwise)
Preceding gene: 186476155
Following gene: 186476157
Centisome position: 45.14
GC content: 63.66
Gene sequence:
>1299_bases ATGAAGAAAGGTTTCTACACGATCATCGCCGCACAGTTCGTGTCGTCGCTCGCCGATAACGCGCTGCTGATCGCGGCCAT CGCGCTGCTCACCGAAATCCGCTCGCCCGCGTGGATGACGCCGCTACTGCAAATCTTCTTCACGATTTCGTACGTCCTGC TCGCGCCCTTCGTGGGCGCATTCGCCGATGCGCTGCAAAAGCGCCACGTGATGTTCGTCTCGAATGCGTTGAAGGCAGGT GGCTGCCTGATGATGATCGGCGGTGTGCATCCGATGATCGCATATGGGGTGGTCGGCTTCGGCGCGGCCGCATACTCCCC CGCGAAGTACGGCATTCTGACCGAACTGTTGCCCGCCGAACGGCTCGTCGCCGCGAACGCGTGGCTCGAATCGGCAACCG TGCTGTCGACCATCGTCGGCACGATGCTGGGCGGCGCGCTGATCAGCACCTATGCGTCGCATCTGGTTCAGCATATGCAG TGGCCGCTGATCCATTCCGCCGCCGAGCTTGCAATGCTCGCGGTCATGATCACCTACGCGATCGCCGCGGCGCTCAACGT CGGCATCCCCGACACCGGGGCGCGCTATCCGAACCGGCTGGTCGAGCCCGGCGCGCTCGTCGGCGAGTTCGTGCGCTGTT TCAACGTGCTGTGGGCCGACCGCCTCGCGCAGATTGCGCTGTGGGTCACGACGCTGATGTGGGGCGGTGCCGTCACGCTG CAACTGCTCGTGCTCAAATGGGCGGATGTGAACCTCGGGTTGTCGCTTTCGAAGGCAGCCGTCATACAGGGCGTCGCCGG CCTGGGCATTGCGATCGGCGCGGCGGCGGCCGCTGCGTGGATTCCGCTGCGCGCTTCGCTCAAGGTGCTGCCCGTCGGTC TGATCACGGGCGGTGTCGCTATCGCGATGGCCTTCTACAGCAAGAGCTTGTTTCCTCCCGGCGCCGGTCTGCGCGTGGGC GAACTGTTTGCACCTGCTTATCTGATCTTCGCGTATCCGTTGATGGTCTTGCTCGGCGCGCTGTCGGGATTTTTCATCGT GCCGATGAACGCGATTCTCCAGCACCGCGGCGCGACGCTTCTCACGGCGGGCCACTCGATCGCCGTCCAGAACTTCAACC AGAACCTGGCCGTCCTGCTGATGCTCGGCGCCTACGCGATCCTGCTGACGGCGAAAATGCCCGTGCAGTGGATCATCGCC GTGTTCGGTCTGTTCATTACCGGAATGATGTGGCTTGCGCAACGGCGCAGCGCCGCGAACGCGCACATGGTGGACATGCG CGCGCTCATCGAGGAATGA
Upstream 100 bases:
>100_bases CGCTTTTTTCTTTATGAGCCACCACGTGCAACGGGTCTGCCGCACGCCGCAAAGCGTGCGTCAAAGGCAAAATTGCGGAC GCTGTGTTCCAATCGGGTCC
Downstream 100 bases:
>100_bases GCGCGCGCGCAGCTCGAGCAACGGAACATCGCGACGGCAGGCTGGCCATCCGGCCAGGTTCGCTCGACGCGTCGCCGGGT TAAACTCACGCCCTGAACAG
Product: lysophospholipid transporter LplT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MKKGFYTIIAAQFVSSLADNALLIAAIALLTEIRSPAWMTPLLQIFFTISYVLLAPFVGAFADALQKRHVMFVSNALKAG GCLMMIGGVHPMIAYGVVGFGAAAYSPAKYGILTELLPAERLVAANAWLESATVLSTIVGTMLGGALISTYASHLVQHMQ WPLIHSAAELAMLAVMITYAIAAALNVGIPDTGARYPNRLVEPGALVGEFVRCFNVLWADRLAQIALWVTTLMWGGAVTL QLLVLKWADVNLGLSLSKAAVIQGVAGLGIAIGAAAAAAWIPLRASLKVLPVGLITGGVAIAMAFYSKSLFPPGAGLRVG ELFAPAYLIFAYPLMVLLGALSGFFIVPMNAILQHRGATLLTAGHSIAVQNFNQNLAVLLMLGAYAILLTAKMPVQWIIA VFGLFITGMMWLAQRRSAANAHMVDMRALIEE
Sequences:
>Translated_432_residues MKKGFYTIIAAQFVSSLADNALLIAAIALLTEIRSPAWMTPLLQIFFTISYVLLAPFVGAFADALQKRHVMFVSNALKAG GCLMMIGGVHPMIAYGVVGFGAAAYSPAKYGILTELLPAERLVAANAWLESATVLSTIVGTMLGGALISTYASHLVQHMQ WPLIHSAAELAMLAVMITYAIAAALNVGIPDTGARYPNRLVEPGALVGEFVRCFNVLWADRLAQIALWVTTLMWGGAVTL QLLVLKWADVNLGLSLSKAAVIQGVAGLGIAIGAAAAAAWIPLRASLKVLPVGLITGGVAIAMAFYSKSLFPPGAGLRVG ELFAPAYLIFAYPLMVLLGALSGFFIVPMNAILQHRGATLLTAGHSIAVQNFNQNLAVLLMLGAYAILLTAKMPVQWIIA VFGLFITGMMWLAQRRSAANAHMVDMRALIEE >Mature_432_residues MKKGFYTIIAAQFVSSLADNALLIAAIALLTEIRSPAWMTPLLQIFFTISYVLLAPFVGAFADALQKRHVMFVSNALKAG GCLMMIGGVHPMIAYGVVGFGAAAYSPAKYGILTELLPAERLVAANAWLESATVLSTIVGTMLGGALISTYASHLVQHMQ WPLIHSAAELAMLAVMITYAIAAALNVGIPDTGARYPNRLVEPGALVGEFVRCFNVLWADRLAQIALWVTTLMWGGAVTL QLLVLKWADVNLGLSLSKAAVIQGVAGLGIAIGAAAAAAWIPLRASLKVLPVGLITGGVAIAMAFYSKSLFPPGAGLRVG ELFAPAYLIFAYPLMVLLGALSGFFIVPMNAILQHRGATLLTAGHSIAVQNFNQNLAVLLMLGAYAILLTAKMPVQWIIA VFGLFITGMMWLAQRRSAANAHMVDMRALIEE
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=420, Percent_Identity=35.7142857142857, Blast_Score=211, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45805; Mature: 45805
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGFYTIIAAQFVSSLADNALLIAAIALLTEIRSPAWMTPLLQIFFTISYVLLAPFVGA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FADALQKRHVMFVSNALKAGGCLMMIGGVHPMIAYGVVGFGAAAYSPAKYGILTELLPAE HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCHHHCCCHHHHHHHHHCCHH RLVAANAWLESATVLSTIVGTMLGGALISTYASHLVQHMQWPLIHSAAELAMLAVMITYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH IAAALNVGIPDTGARYPNRLVEPGALVGEFVRCFNVLWADRLAQIALWVTTLMWGGAVTL HHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH QLLVLKWADVNLGLSLSKAAVIQGVAGLGIAIGAAAAAAWIPLRASLKVLPVGLITGGVA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHH IAMAFYSKSLFPPGAGLRVGELFAPAYLIFAYPLMVLLGALSGFFIVPMNAILQHRGATL HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEE LTAGHSIAVQNFNQNLAVLLMLGAYAILLTAKMPVQWIIAVFGLFITGMMWLAQRRSAAN EECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC AHMVDMRALIEE HHHHHHHHHHCC >Mature Secondary Structure MKKGFYTIIAAQFVSSLADNALLIAAIALLTEIRSPAWMTPLLQIFFTISYVLLAPFVGA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH FADALQKRHVMFVSNALKAGGCLMMIGGVHPMIAYGVVGFGAAAYSPAKYGILTELLPAE HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCHHHCCCHHHHHHHHHCCHH RLVAANAWLESATVLSTIVGTMLGGALISTYASHLVQHMQWPLIHSAAELAMLAVMITYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH IAAALNVGIPDTGARYPNRLVEPGALVGEFVRCFNVLWADRLAQIALWVTTLMWGGAVTL HHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH QLLVLKWADVNLGLSLSKAAVIQGVAGLGIAIGAAAAAAWIPLRASLKVLPVGLITGGVA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHH IAMAFYSKSLFPPGAGLRVGELFAPAYLIFAYPLMVLLGALSGFFIVPMNAILQHRGATL HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEE LTAGHSIAVQNFNQNLAVLLMLGAYAILLTAKMPVQWIIAVFGLFITGMMWLAQRRSAAN EECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC AHMVDMRALIEE HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA