| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476124
Identifier: 186476124
GI number: 186476124
Start: 1533536
End: 1533805
Strand: Direct
Name: 186476124
Synonym: Bphy_1366
Alternate gene names: NA
Gene position: 1533536-1533805 (Clockwise)
Preceding gene: 186476119
Following gene: 186476125
Centisome position: 44.08
GC content: 60.74
Gene sequence:
>270_bases ATGAGCGACGTGAATGGTCTCTTCGTCCAGGCACAGGACGACGTGAAGCAACTGCGGGAGCGTCCGGGCAATCTCACGCT GCTGCGCCTGTACGCGCTCTTCAAACAGGCCACCGATGGCGACGTGCACGGCGACAAGCCGGGGTTCACCGATATCGTCG GCAAGTACAAGTACGATGCGTGGGCCGCGCTGCAAGGCACGGCTCCCGACATAGCGAAGCAGCAATACGTCGAACTGGTC GAAGCGCTAAAAAACGGTACGGCTGCCTGA
Upstream 100 bases:
>100_bases GCTCAGCGTTTGGAAGGATCGCTCGAGCTTCGTGCGACCGCGCGCCGCATCCTGCTTGTTATGATCGACGCCCTATCCCG AATCAAGCATGGAGGATCCG
Downstream 100 bases:
>100_bases TCGGTTATCGGTAGCCGCGAGTGGGAACCAAGGGTTTCGAGGCCAGCACCTCTGCATTCTTCTCACAAATCGGCCAGTTT CACTGGGAAGGTTCTTAACG
Product: acyl-CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSDVNGLFVQAQDDVKQLRERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDAWAALQGTAPDIAKQQYVELV EALKNGTAA
Sequences:
>Translated_89_residues MSDVNGLFVQAQDDVKQLRERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDAWAALQGTAPDIAKQQYVELV EALKNGTAA >Mature_88_residues SDVNGLFVQAQDDVKQLRERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDAWAALQGTAPDIAKQQYVELVE ALKNGTAA
Specific function: Unknown
COG id: COG4281
COG function: function code I; Acyl-CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI120433590, Length=77, Percent_Identity=40.2597402597403, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI120433593, Length=77, Percent_Identity=40.2597402597403, Blast_Score=71, Evalue=2e-13, Organism=Homo sapiens, GI260274832, Length=71, Percent_Identity=45.0704225352113, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI45643119, Length=71, Percent_Identity=45.0704225352113, Blast_Score=68, Evalue=1e-12, Organism=Homo sapiens, GI260275230, Length=71, Percent_Identity=45.0704225352113, Blast_Score=68, Evalue=1e-12, Organism=Homo sapiens, GI295842534, Length=70, Percent_Identity=41.4285714285714, Blast_Score=66, Evalue=5e-12, Organism=Homo sapiens, GI295842514, Length=70, Percent_Identity=41.4285714285714, Blast_Score=66, Evalue=6e-12, Organism=Homo sapiens, GI295849266, Length=70, Percent_Identity=41.4285714285714, Blast_Score=65, Evalue=9e-12, Organism=Homo sapiens, GI295849279, Length=70, Percent_Identity=41.4285714285714, Blast_Score=65, Evalue=9e-12, Organism=Homo sapiens, GI10140853, Length=70, Percent_Identity=41.4285714285714, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17535521, Length=76, Percent_Identity=51.3157894736842, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17506027, Length=76, Percent_Identity=51.3157894736842, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321474, Length=80, Percent_Identity=40, Blast_Score=65, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582714, Length=76, Percent_Identity=48.6842105263158, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24659809, Length=80, Percent_Identity=43.75, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24659814, Length=80, Percent_Identity=43.75, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI21357027, Length=74, Percent_Identity=43.2432432432432, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9769; Mature: 9638
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVNGLFVQAQDDVKQLRERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDA CCCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCC WAALQGTAPDIAKQQYVELVEALKNGTAA HHCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDVNGLFVQAQDDVKQLRERPGNLTLLRLYALFKQATDGDVHGDKPGFTDIVGKYKYDA CCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCC WAALQGTAPDIAKQQYVELVEALKNGTAA HHCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA