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The map label for this gene is glnD [H]

Identifier: 186476098

GI number: 186476098

Start: 1499680

End: 1502259

Strand: Direct

Name: glnD [H]

Synonym: Bphy_1340

Alternate gene names: 186476098

Gene position: 1499680-1502259 (Clockwise)

Preceding gene: 186476097

Following gene: 186476099

Centisome position: 43.1

GC content: 63.68

Gene sequence:

>2580_bases
ATGAGTAGCGTTCACGCTGTCGCCCATTCCGATGCCACGTCTCTCAAGGCGGATTACAAGGTGGCCAAGACCCCGCTGCT
CGACCGCTTCAAGACCGCGTCCAACGTCGACACGCTGATGCGCTCGCTCGCGCGCATCACCGACGACGCGCTGCGCGGCG
CCTGGACGGCCTGCGACCTCCCCGCCTCGCTGGCGCTGCTGGCCGTGGGCGGCTATGGGCGCGGCGAGCTGGCGCCCCAC
TCCGACATCGACATTCTCGTGCTGCTGCCCGACGAGCCGATGCCGCATCTCAATGCGCGTATCGAGCGCTTCATCGGCCT
CGCATGGGACCTGGGGCTGGAACTGGGCAGCAGCGTGCGTACGGTGTCGCAATGCATCGAAGAAGCGGCGAACGACGTCA
CGGTGCAAACCTCGCTGCTGGAGGCGCGGCGCATCGTCGGCAGCACGACGCTGTTCGAGAGTTTTTCGCTGCGTTATCGC
GACGCGCTCGATCCGCGCGCATTCTTCCAGGCAAAAGTACTGGAAATGCGCCAGCGGCATGCGAAATTCCAGGACACACC
CTACGCGCTCGAACCGAACATCAAGGAAAGCCCGGGCGGGTTGCGCGATCTTCAGCTGATTCTCTGGATCACACAGGCGG
CCGGCTTCGGCAGCAGCTGGCGCGAACTCGACGCACGTGGCCTGATCACCGACCGCGAAGCGCGCGAGCTGCGCCGCAAC
GAAGGCTTTCTGAAGACGCTGCGGGCGCGTCTACACGTGCTGGCGGGACGTCGCCAGGACATTCTTGTGTTCGACGTGCA
GACGCCGCTTGCCGAGAGCTTCGGCTTCAAGGCAACATCCACGCGCCGCGCCAGCGAGCAGTTGATGCGCCGTTACTACT
GGGCCGCGAAAGCCGTCACGCAACTGTCGACCATTCTGATCCAGAACATCGAAGCTCAGCTTTTTCCGAGCACGAGCGGC
ATCACGCGCGTTCTGTCAGATCGCTTCGTCGAGAAACAGGGCATGCTGGAAATCGCCAGCGACGATGTGTTCGAGCGCGA
ACCGAACGCGATCCTCGAGGCCTTCCTGCTGTACGAAGAAACGCCCGGCGTCAAAGGTCTGTCGGCGCGCACCCTGCGCG
CGTTGTACAACGCGCGCGACAAGATGAATCACCACTGGCGGCGCGACCCCGAAAATCGCCGCCTGTTCATGGAAATCCTC
AAGCAGCCGCAGGGCATCACGCATGCGATGCGTCTGATGAACCAGACCAGCGTGCTCGGGCGCTATCTGCTGAACTTCCG
CCGCATCGTCGGACAGATGCAGCACGATCTGTATCACGTCTACACGGTCGATCAACATATTCTGATGGTGCTTCGGAATA
TGCGCCGCTTTGCGGTCGCCGAGCATGCGCACGAATATCCGTTCTGCAGCCAGCTGATCGCGAATTTCGAGCGGCCATAC
GTGCTCTACGTGGCTGCGCTGTTCCACGACATCGCGAAGGGTCGCGGTGGCGATCATTCGACGCTCGGCATGGCCGACGC
GCGCCGTTTCTGCCGCGATCACGACATGTCGCCCGACGACACGGCACTGGTCGTCTGGCTTGTCCAGCATCACCTGACCA
TGAGCCAGGTCGCGCAGAAGCAGGACACGAGCGACCCGGAGGTGATCAAGCGTTTCGCCGACCTGGTCGGCACCGAGCGG
CATCTCACCGGGCTATACCTGCTGACGGTCGCGGACATTCGCGGCACCAGCCCGAAAGTCTGGAACACGTGGAAAGGCAA
ACTGCTCGAAGACCTGTACCGCGCGACGCTCGCCGTGCTCGGCGGCGCGCGTCCCGATGCGCACTCGGAACTGAAGCAGC
GCCAGGAAGAAGCCCTTGCGCTGCTGCGGCTCGAAACGGTGCCCGAAAACGCGCACCGTGCGCTGTGGGACAAGCTCGAC
GTCGGCTATTTCCTGCGCCATGACGCCGCCGACATCGCGTGGCAGACGCGCGTGCTGCATCGCCACGTCGAGACCGGGAC
GCCGATCGTACGCGCTCGCCCGTCACCTATCGGCGAAGCGCTGCAGGTGCTGGTCTACGTGAAGGATCGCCCCGACCTCT
TCGCGGGCATCTGCGCATATTTCGACCGCAATTCGCTGTCCGTGCTCGATGCACGTGTGAGCACGACCAAACACGGTTAC
GCGCTCGACAACTTCCTCGTGCAGCATACGGAGCGTGACGTCCACTATCGCGACATCGCCAACCTTGTCGAACAGGAATT
GGCGGAACGCCTGAGAGCGGAAGGCACGCTGTTGCCGGAGCCGTCGAAAGGCCGTTTGTCGCGTCTGTCGCGCACGTTTC
CCGTGACGCCGCGCGTCGACCTGAGGGCCGACGAGCGCGGCCAGTATTACATCCTGTCCGTGTCGGCCAACGACCGGCCG
GGCCTTCTTTATTCGATCGCGCGCGTGCTGGCCGAGCACCGGGTCGGCGTCCATGCGGCGCGGATCAATACGCTCGGCGA
ACGCGTCGAGGACGTGTTCCTGCTCGACGGACACGGCCTCTCGGACAACCGACGACAAATCCAGGTTGAAACGGAGCTGC
TGCGCGCGATCGCAGTGTGA

Upstream 100 bases:

>100_bases
ACGGGCTACGAAGTGCTGACCGTGTCGGAAGGCACGCCCGCGCGTCCGCAAATCGTCGCCGCCGCCACGGCCTGATCACT
TTCGCCGCCACCCGCCGCCT

Downstream 100 bases:

>100_bases
GATTTCATGCGAGTCAAACTGACAGCCAAGCATCCGCGGCCGGCTTCGTCCGAACGCGCCCCTGTGCGTTCGGGCAGCAC
GACTGCCCGCAAGCCGACTC

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]

Number of amino acids: Translated: 859; Mature: 858

Protein sequence:

>859_residues
MSSVHAVAHSDATSLKADYKVAKTPLLDRFKTASNVDTLMRSLARITDDALRGAWTACDLPASLALLAVGGYGRGELAPH
SDIDILVLLPDEPMPHLNARIERFIGLAWDLGLELGSSVRTVSQCIEEAANDVTVQTSLLEARRIVGSTTLFESFSLRYR
DALDPRAFFQAKVLEMRQRHAKFQDTPYALEPNIKESPGGLRDLQLILWITQAAGFGSSWRELDARGLITDREARELRRN
EGFLKTLRARLHVLAGRRQDILVFDVQTPLAESFGFKATSTRRASEQLMRRYYWAAKAVTQLSTILIQNIEAQLFPSTSG
ITRVLSDRFVEKQGMLEIASDDVFEREPNAILEAFLLYEETPGVKGLSARTLRALYNARDKMNHHWRRDPENRRLFMEIL
KQPQGITHAMRLMNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNMRRFAVAEHAHEYPFCSQLIANFERPY
VLYVAALFHDIAKGRGGDHSTLGMADARRFCRDHDMSPDDTALVVWLVQHHLTMSQVAQKQDTSDPEVIKRFADLVGTER
HLTGLYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVLGGARPDAHSELKQRQEEALALLRLETVPENAHRALWDKLD
VGYFLRHDAADIAWQTRVLHRHVETGTPIVRARPSPIGEALQVLVYVKDRPDLFAGICAYFDRNSLSVLDARVSTTKHGY
ALDNFLVQHTERDVHYRDIANLVEQELAERLRAEGTLLPEPSKGRLSRLSRTFPVTPRVDLRADERGQYYILSVSANDRP
GLLYSIARVLAEHRVGVHAARINTLGERVEDVFLLDGHGLSDNRRQIQVETELLRAIAV

Sequences:

>Translated_859_residues
MSSVHAVAHSDATSLKADYKVAKTPLLDRFKTASNVDTLMRSLARITDDALRGAWTACDLPASLALLAVGGYGRGELAPH
SDIDILVLLPDEPMPHLNARIERFIGLAWDLGLELGSSVRTVSQCIEEAANDVTVQTSLLEARRIVGSTTLFESFSLRYR
DALDPRAFFQAKVLEMRQRHAKFQDTPYALEPNIKESPGGLRDLQLILWITQAAGFGSSWRELDARGLITDREARELRRN
EGFLKTLRARLHVLAGRRQDILVFDVQTPLAESFGFKATSTRRASEQLMRRYYWAAKAVTQLSTILIQNIEAQLFPSTSG
ITRVLSDRFVEKQGMLEIASDDVFEREPNAILEAFLLYEETPGVKGLSARTLRALYNARDKMNHHWRRDPENRRLFMEIL
KQPQGITHAMRLMNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNMRRFAVAEHAHEYPFCSQLIANFERPY
VLYVAALFHDIAKGRGGDHSTLGMADARRFCRDHDMSPDDTALVVWLVQHHLTMSQVAQKQDTSDPEVIKRFADLVGTER
HLTGLYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVLGGARPDAHSELKQRQEEALALLRLETVPENAHRALWDKLD
VGYFLRHDAADIAWQTRVLHRHVETGTPIVRARPSPIGEALQVLVYVKDRPDLFAGICAYFDRNSLSVLDARVSTTKHGY
ALDNFLVQHTERDVHYRDIANLVEQELAERLRAEGTLLPEPSKGRLSRLSRTFPVTPRVDLRADERGQYYILSVSANDRP
GLLYSIARVLAEHRVGVHAARINTLGERVEDVFLLDGHGLSDNRRQIQVETELLRAIAV
>Mature_858_residues
SSVHAVAHSDATSLKADYKVAKTPLLDRFKTASNVDTLMRSLARITDDALRGAWTACDLPASLALLAVGGYGRGELAPHS
DIDILVLLPDEPMPHLNARIERFIGLAWDLGLELGSSVRTVSQCIEEAANDVTVQTSLLEARRIVGSTTLFESFSLRYRD
ALDPRAFFQAKVLEMRQRHAKFQDTPYALEPNIKESPGGLRDLQLILWITQAAGFGSSWRELDARGLITDREARELRRNE
GFLKTLRARLHVLAGRRQDILVFDVQTPLAESFGFKATSTRRASEQLMRRYYWAAKAVTQLSTILIQNIEAQLFPSTSGI
TRVLSDRFVEKQGMLEIASDDVFEREPNAILEAFLLYEETPGVKGLSARTLRALYNARDKMNHHWRRDPENRRLFMEILK
QPQGITHAMRLMNQTSVLGRYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNMRRFAVAEHAHEYPFCSQLIANFERPYV
LYVAALFHDIAKGRGGDHSTLGMADARRFCRDHDMSPDDTALVVWLVQHHLTMSQVAQKQDTSDPEVIKRFADLVGTERH
LTGLYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVLGGARPDAHSELKQRQEEALALLRLETVPENAHRALWDKLDV
GYFLRHDAADIAWQTRVLHRHVETGTPIVRARPSPIGEALQVLVYVKDRPDLFAGICAYFDRNSLSVLDARVSTTKHGYA
LDNFLVQHTERDVHYRDIANLVEQELAERLRAEGTLLPEPSKGRLSRLSRTFPVTPRVDLRADERGQYYILSVSANDRPG
LLYSIARVLAEHRVGVHAARINTLGERVEDVFLLDGHGLSDNRRQIQVETELLRAIAV

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family [H]

Homologues:

Organism=Escherichia coli, GI1786363, Length=834, Percent_Identity=35.6115107913669, Blast_Score=503, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546 [H]

Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]

EC number: =2.7.7.59 [H]

Molecular weight: Translated: 97416; Mature: 97284

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVHAVAHSDATSLKADYKVAKTPLLDRFKTASNVDTLMRSLARITDDALRGAWTACDL
CCCCHHHHCCCCHHHHCCHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCC
PASLALLAVGGYGRGELAPHSDIDILVLLPDEPMPHLNARIERFIGLAWDLGLELGSSVR
CHHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHH
TVSQCIEEAANDVTVQTSLLEARRIVGSTTLFESFSLRYRDALDPRAFFQAKVLEMRQRH
HHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AKFQDTPYALEPNIKESPGGLRDLQLILWITQAAGFGSSWRELDARGLITDREARELRRN
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHC
EGFLKTLRARLHVLAGRRQDILVFDVQTPLAESFGFKATSTRRASEQLMRRYYWAAKAVT
CHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QLSTILIQNIEAQLFPSTSGITRVLSDRFVEKQGMLEIASDDVFEREPNAILEAFLLYEE
HHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCEECCCCHHCCCHHHHHHHHHHHHC
TPGVKGLSARTLRALYNARDKMNHHWRRDPENRRLFMEILKQPQGITHAMRLMNQTSVLG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNMRRFAVAEHAHEYPFCSQLIANFERPY
HHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH
VLYVAALFHDIAKGRGGDHSTLGMADARRFCRDHDMSPDDTALVVWLVQHHLTMSQVAQK
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QDTSDPEVIKRFADLVGTERHLTGLYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVL
CCCCCHHHHHHHHHHHCCCHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GGARPDAHSELKQRQEEALALLRLETVPENAHRALWDKLDVGYFLRHDAADIAWQTRVLH
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
RHVETGTPIVRARPSPIGEALQVLVYVKDRPDLFAGICAYFDRNSLSVLDARVSTTKHGY
HHHHCCCCEEEECCCCHHHHHEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
ALDNFLVQHTERDVHYRDIANLVEQELAERLRAEGTLLPEPSKGRLSRLSRTFPVTPRVD
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCC
LRADERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFLLDGHGL
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCC
SDNRRQIQVETELLRAIAV
CCCCCEEEHHHHHHHHHCC
>Mature Secondary Structure 
SSVHAVAHSDATSLKADYKVAKTPLLDRFKTASNVDTLMRSLARITDDALRGAWTACDL
CCCHHHHCCCCHHHHCCHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCC
PASLALLAVGGYGRGELAPHSDIDILVLLPDEPMPHLNARIERFIGLAWDLGLELGSSVR
CHHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHH
TVSQCIEEAANDVTVQTSLLEARRIVGSTTLFESFSLRYRDALDPRAFFQAKVLEMRQRH
HHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AKFQDTPYALEPNIKESPGGLRDLQLILWITQAAGFGSSWRELDARGLITDREARELRRN
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHC
EGFLKTLRARLHVLAGRRQDILVFDVQTPLAESFGFKATSTRRASEQLMRRYYWAAKAVT
CHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QLSTILIQNIEAQLFPSTSGITRVLSDRFVEKQGMLEIASDDVFEREPNAILEAFLLYEE
HHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHCCCCEECCCCHHCCCHHHHHHHHHHHHC
TPGVKGLSARTLRALYNARDKMNHHWRRDPENRRLFMEILKQPQGITHAMRLMNQTSVLG
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
RYLLNFRRIVGQMQHDLYHVYTVDQHILMVLRNMRRFAVAEHAHEYPFCSQLIANFERPY
HHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCH
VLYVAALFHDIAKGRGGDHSTLGMADARRFCRDHDMSPDDTALVVWLVQHHLTMSQVAQK
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QDTSDPEVIKRFADLVGTERHLTGLYLLTVADIRGTSPKVWNTWKGKLLEDLYRATLAVL
CCCCCHHHHHHHHHHHCCCHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
GGARPDAHSELKQRQEEALALLRLETVPENAHRALWDKLDVGYFLRHDAADIAWQTRVLH
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
RHVETGTPIVRARPSPIGEALQVLVYVKDRPDLFAGICAYFDRNSLSVLDARVSTTKHGY
HHHHCCCCEEEECCCCHHHHHEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
ALDNFLVQHTERDVHYRDIANLVEQELAERLRAEGTLLPEPSKGRLSRLSRTFPVTPRVD
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCC
LRADERGQYYILSVSANDRPGLLYSIARVLAEHRVGVHAARINTLGERVEDVFLLDGHGL
CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCCC
SDNRRQIQVETELLRAIAV
CCCCCEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA