| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is guaB [H]
Identifier: 186476072
GI number: 186476072
Start: 1472732
End: 1474192
Strand: Reverse
Name: guaB [H]
Synonym: Bphy_1314
Alternate gene names: 186476072
Gene position: 1474192-1472732 (Counterclockwise)
Preceding gene: 186476074
Following gene: 186476071
Centisome position: 42.37
GC content: 64.75
Gene sequence:
>1461_bases ATGCGTCTGATCCAAAAAGCACTCACGTTCGATGACGTGCTCCTCGTCCCGGCTTTCTCCGACGTTCTGCCGCGCGACAC CAGCCTCAAAACCCGGCTGACCCGCAACATCTCCCTCAATATGCCGCTCGTGTCCGCCGCCATGGACACCGTCACGGAGG CTCGCCTTGCCATCGCGATGGCGCAGATGGGTGGCGTCGGCATCATCCACAAGAATCTCACGCCGGCCGAGCAGGCTCGC GAAGTCGCGAAGGTCAAGCGTTTCGAATCGGGCGTCGTGCGCGATCCGATCACCGTTCCGCCGCAAATGAAGGTGAGCGA CGTGATCGCACTGTCGCGCCAGCATGGCATTTCGGGCTTCCCCGTGGTGGAAGGGGCGCAGCTGATCGGCATCGTCACGA ACCGCGACCTGCGTTTCGAAACGCGTCTGGACGAGCCCGTGCGCACGATCATGACGCCGCGCGAACGCCTCGTTACGGTG AAGGAAGGTACGCCGCTCGCCGAAGCGAAGGCGCTGATGCACAGCCACCGCCTCGAGCGCGTGCTGGTCGTCAACGACGC GTTCGAACTGCGCGGCCTGATGACGGTGAAGGACATCACCAAGCAGACGGAGCATCCGGACGCCTGTAAGGACGAGCATG GCAAGCTGCGCGCAGGCGCCGCGGTCGGCGTCGGCCCGGACAACGAGGAGCGCGTGTCGCTGCTGGTGCAGGCGGGCGTG GACGTAATCGTCGTCGATACGGCGCACGGCCACAGCAAGGGTGTGCTGGAGCGCGTCCAGTGGGTCAAGAAGAGCTTCCC GCACGTCGAGGTGATCGGCGGCAACATCGCCACGGCCGATGCGGCCAAGGCGCTCGTTGAATACGGCGCGGATGGCGTGA AGGTCGGTATCGGCCCCGGTTCGATCTGTACGACGCGTATTGTGGCTGGCGTGGGCGTGCCGCAAATCTCGGCGATCGCC AACGTGTCGGCCGCGCTCAAGGGCACGGGCATCCCCGTGATCGCGGACGGCGGCGTGCGCTTCTCTGGCGACGTCAGCAA GGCGCTGGCCGCGGGCGCCAATGCGGTGATGATGGGTAGCATGTTCGCTGGCACGGAAGAAGCGCCAGGCGACGTGTTTC TCTATCAAGGCCGCCAGTACAAGTCGTACCGCGGCATGGGTTCCGTCGGCGCGATGAAGGACGGCGCGGCTGACCGCTAC TTCCAGGACAATTCCGCGAACATCGACAAGCTCGTGCCGGAAGGCATCGAAGGCCGCGTCGCGTACAAGGGCTCGGTTGG CGCGATCCTGTTCCAGTTGATCGGCGGCGTGCGCGCGTCAATGGGCTACTGCGGCTGCCGCACGATCGACGAACTGCACG AGAAGGCCTCGTTCGTCGAAATCACCGCGGCGGGCATGCGCGAATCCCACGTGCACGATGTGCAGATCACGAAGGAAGCC CCTAACTACCACGTGGACTAA
Upstream 100 bases:
>100_bases GACGCGAAAGAACATTGAAGAATTTCGCTAACTGACTGTTCGCGCAGTGAAAACCGGGAGGTATCGCGTATAATTCGCTT TTGCGCCTATAGGATTTGCC
Downstream 100 bases:
>100_bases TTGCCGATGAAGCCGCTGCTGCGTGCCGTACTGATCATCGATGCCTTGTTGTTGCTGGCATTCGGGCTGCTACTCCTGCT CACGCCGTGGAAGTCGCTGT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNISLNMPLVSAAMDTVTEARLAIAMAQMGGVGIIHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPQMKVSDVIALSRQHGISGFPVVEGAQLIGIVTNRDLRFETRLDEPVRTIMTPRERLVTV KEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVSLLVQAGV DVIVVDTAHGHSKGVLERVQWVKKSFPHVEVIGGNIATADAAKALVEYGADGVKVGIGPGSICTTRIVAGVGVPQISAIA NVSAALKGTGIPVIADGGVRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVGAILFQLIGGVRASMGYCGCRTIDELHEKASFVEITAAGMRESHVHDVQITKEA PNYHVD
Sequences:
>Translated_486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNISLNMPLVSAAMDTVTEARLAIAMAQMGGVGIIHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPQMKVSDVIALSRQHGISGFPVVEGAQLIGIVTNRDLRFETRLDEPVRTIMTPRERLVTV KEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVSLLVQAGV DVIVVDTAHGHSKGVLERVQWVKKSFPHVEVIGGNIATADAAKALVEYGADGVKVGIGPGSICTTRIVAGVGVPQISAIA NVSAALKGTGIPVIADGGVRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVGAILFQLIGGVRASMGYCGCRTIDELHEKASFVEITAAGMRESHVHDVQITKEA PNYHVD >Mature_486_residues MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNISLNMPLVSAAMDTVTEARLAIAMAQMGGVGIIHKNLTPAEQAR EVAKVKRFESGVVRDPITVPPQMKVSDVIALSRQHGISGFPVVEGAQLIGIVTNRDLRFETRLDEPVRTIMTPRERLVTV KEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVSLLVQAGV DVIVVDTAHGHSKGVLERVQWVKKSFPHVEVIGGNIATADAAKALVEYGADGVKVGIGPGSICTTRIVAGVGVPQISAIA NVSAALKGTGIPVIADGGVRFSGDVSKALAAGANAVMMGSMFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRY FQDNSANIDKLVPEGIEGRVAYKGSVGAILFQLIGGVRASMGYCGCRTIDELHEKASFVEITAAGMRESHVHDVQITKEA PNYHVD
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=454, Percent_Identity=42.9515418502203, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI156616279, Length=454, Percent_Identity=42.9515418502203, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=454, Percent_Identity=42.9515418502203, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI34328930, Length=454, Percent_Identity=42.9515418502203, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI217035152, Length=450, Percent_Identity=42.8888888888889, Blast_Score=359, Evalue=3e-99, Organism=Homo sapiens, GI217035148, Length=454, Percent_Identity=42.0704845814978, Blast_Score=354, Evalue=9e-98, Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=39.6265560165975, Blast_Score=349, Evalue=3e-96, Organism=Homo sapiens, GI217035150, Length=454, Percent_Identity=39.4273127753304, Blast_Score=322, Evalue=5e-88, Organism=Homo sapiens, GI156104880, Length=262, Percent_Identity=35.1145038167939, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI50541954, Length=245, Percent_Identity=36.734693877551, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI50541952, Length=245, Percent_Identity=36.734693877551, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI50541948, Length=245, Percent_Identity=36.734693877551, Blast_Score=157, Evalue=3e-38, Organism=Homo sapiens, GI50541956, Length=245, Percent_Identity=36.734693877551, Blast_Score=157, Evalue=3e-38, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=61.8069815195072, Blast_Score=569, Evalue=1e-163, Organism=Escherichia coli, GI1786293, Length=230, Percent_Identity=33.4782608695652, Blast_Score=137, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71994385, Length=475, Percent_Identity=38.3157894736842, Blast_Score=304, Evalue=9e-83, Organism=Caenorhabditis elegans, GI71994389, Length=424, Percent_Identity=39.3867924528302, Blast_Score=288, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17560440, Length=239, Percent_Identity=35.1464435146443, Blast_Score=157, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6322012, Length=488, Percent_Identity=38.7295081967213, Blast_Score=352, Evalue=7e-98, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=39.2561983471074, Blast_Score=349, Evalue=6e-97, Organism=Saccharomyces cerevisiae, GI6323464, Length=484, Percent_Identity=39.0495867768595, Blast_Score=340, Evalue=3e-94, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=38.3040935672515, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6319353, Length=142, Percent_Identity=35.9154929577465, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI24641071, Length=485, Percent_Identity=40.4123711340206, Blast_Score=354, Evalue=9e-98, Organism=Drosophila melanogaster, GI24641073, Length=485, Percent_Identity=40.4123711340206, Blast_Score=354, Evalue=9e-98, Organism=Drosophila melanogaster, GI28571163, Length=443, Percent_Identity=41.0835214446953, Blast_Score=320, Evalue=2e-87,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51827; Mature: 51827
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNISLNMPLVSAAMDTVTEARLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHH AQMGGVGIIHKNLTPAEQAREVAKVKRFESGVVRDPITVPPQMKVSDVIALSRQHGISGF HHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC PVVEGAQLIGIVTNRDLRFETRLDEPVRTIMTPRERLVTVKEGTPLAEAKALMHSHRLER CEECCCEEEEEEECCCEEEECCCCHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCE VLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVSLLVQAGV EEEEECHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECEEECCCCCCHHHHHHHEECCC DVIVVDTAHGHSKGVLERVQWVKKSFPHVEVIGGNIATADAAKALVEYGADGVKVGIGPG CEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHHHCCCCEEEECCCC SICTTRIVAGVGVPQISAIANVSAALKGTGIPVIADGGVRFSGDVSKALAAGANAVMMGS CHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCHHHHHHCCCCEEEECH MFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRYFQDNSANIDKLVPEGIEGRV HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE AYKGSVGAILFQLIGGVRASMGYCGCRTIDELHEKASFVEITAAGMRESHVHDVQITKEA EECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEECC PNYHVD CCCCCC >Mature Secondary Structure MRLIQKALTFDDVLLVPAFSDVLPRDTSLKTRLTRNISLNMPLVSAAMDTVTEARLAIAM CCHHHHHCCCCCEEEECCHHHHCCCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHH AQMGGVGIIHKNLTPAEQAREVAKVKRFESGVVRDPITVPPQMKVSDVIALSRQHGISGF HHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC PVVEGAQLIGIVTNRDLRFETRLDEPVRTIMTPRERLVTVKEGTPLAEAKALMHSHRLER CEECCCEEEEEEECCCEEEECCCCHHHHHHHCCHHHEEEEECCCCHHHHHHHHHHHHCCE VLVVNDAFELRGLMTVKDITKQTEHPDACKDEHGKLRAGAAVGVGPDNEERVSLLVQAGV EEEEECHHHHHCCHHHHHHHHHCCCCCCCCCCCCCEEECEEECCCCCCHHHHHHHEECCC DVIVVDTAHGHSKGVLERVQWVKKSFPHVEVIGGNIATADAAKALVEYGADGVKVGIGPG CEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHHHCCCCEEEECCCC SICTTRIVAGVGVPQISAIANVSAALKGTGIPVIADGGVRFSGDVSKALAAGANAVMMGS CHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCHHHHHHCCCCEEEECH MFAGTEEAPGDVFLYQGRQYKSYRGMGSVGAMKDGAADRYFQDNSANIDKLVPEGIEGRV HHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEE AYKGSVGAILFQLIGGVRASMGYCGCRTIDELHEKASFVEITAAGMRESHVHDVQITKEA EECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEECC PNYHVD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA