| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476054
Identifier: 186476054
GI number: 186476054
Start: 1454234
End: 1455424
Strand: Direct
Name: 186476054
Synonym: Bphy_1295
Alternate gene names: NA
Gene position: 1454234-1455424 (Clockwise)
Preceding gene: 186476053
Following gene: 186476065
Centisome position: 41.8
GC content: 59.7
Gene sequence:
>1191_bases ATGGAAGGCTTCGTTACCGACTGGCTGAATCTCGCGATTCGCTGGTTTCACGTTATCGCCGCAATCGCATGGATCGGCGA GTCGTTCTATTTCGTCGCGCTCGACAACAGCCTGAAACCGCCGACGGACCCTAACCAGCGCCGGCGCGGCGTGTTCGGCG AACTGTGGCATGTGCATGGCGGCGGCTTCTACAACATGCAGAAGTACACCGTCGCCCCGCCCGAAATGCCCGACGACCTG CACTGGTCGAAATGGCCGTCTTACACGACGTGGCTCTCGGGCTTCGGTCTATTCACGGTGCTGTATCTGTTCGCGCCGAA CACATACCTGATCGACAAGAACGTGCTCGACATGGGCCCTGTTGTTGCGATCTTCTCGGCGCTCGGTTTTCTTGCCGCAG GCTGGATCGTGTACGACTCGCTGTGCCGACTGCTCGGCAACAATGACAAGGTTCTCGGTATCTGCGTCGGTCTCTATGTG CTGATTGCCGCGTACCTCGCGTGCCACATCTTCGCGGGCCGCGCGGCCTATCTGATCATGGGCGCGATGCTGGCGACCAT CATGTCGGCGAACGTGTTCTTCGTGATCATTCCGGGTCAGCGCAAGATGGTCGACGCGATGCTCAAGGGCGACACGCCGA ACCCGATCTATGGCAAGCGCGGCAAGCAGCGCTCCGTGCACAACACGTATTTCACGCTGCCCGTGGTGTTCGCAATGCTG TCGAATCACTATGCGATGACGTACACGCATCCATACAACTGGGCGGTGCTCGTTGTCATCATGCTGGCAGGCGCGCTGAT CCGCCAGTTCTTCGTGATGCGTCACCGCGGACAGGTATTGTGGTACCTGCCGCTTGGCGGCGTTGCACTGATGTTCGGCG CGCTCTTCTGGACGATGCCCCGGCCTGTCGTGCCAGTTGCCGAGGCTGCCAACGCTCCTGTCGTGAAGGTTGGCGATATC GTGCCTGTATTGCAGCAGCGCTGCGTGGCTTGTCACTCTGCGCATCCGACGATGATGGGCAGCGCACCCGCTGGCGTGCT GCTCGATACGCCTGAAGAGATCTCGACGAACGCACAGCGTATCTACCAGCAGGCCGTGACGCTAAAGTCGATGCCGCTTG GCAATGTCACACATATGACTGATGACGAGCGTCTGAAGATCGCTGCCTGGTTCCATGGCGGAGCGCATTAA
Upstream 100 bases:
>100_bases GCATCGATCCGATAGCGGACCTGCACCGGCGTAATACACCCGAATGCCGCGCAACACTCGAGATGCTGCGCGAACAACGA ATCAGAAGTGGAGGAGTTTC
Downstream 100 bases:
>100_bases GGCCTGCTTTCCATGGCGTGAGGTCGGTTCTTCACGGTCGGGCTGTTCGCGAATGCGGCGGCCCGTTTTTTTCTGTCTAC GACGCAGTCGCGACTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Cytochrome C Subfamily; Cytochrome C Region
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL HWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGPVVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYV LIAAYLACHIFAGRAAYLIMGAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMPRPVVPVAEAANAPVVKVGDI VPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQRIYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH
Sequences:
>Translated_396_residues MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL HWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGPVVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYV LIAAYLACHIFAGRAAYLIMGAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMPRPVVPVAEAANAPVVKVGDI VPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQRIYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH >Mature_396_residues MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHGGGFYNMQKYTVAPPEMPDDL HWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGPVVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYV LIAAYLACHIFAGRAAYLIMGAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMPRPVVPVAEAANAPVVKVGDI VPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQRIYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH
Specific function: Unknown
COG id: COG3748
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44059; Mature: 44059
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHHEEECC GGFYNMQKYTVAPPEMPDDLHWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGP CCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH VVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYVLIAAYLACHIFAGRAAYLIM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMP CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCC RPVVPVAEAANAPVVKVGDIVPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQR CCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHH IYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MEGFVTDWLNLAIRWFHVIAAIAWIGESFYFVALDNSLKPPTDPNQRRRGVFGELWHVHG CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCCHHHHHEEECC GGFYNMQKYTVAPPEMPDDLHWSKWPSYTTWLSGFGLFTVLYLFAPNTYLIDKNVLDMGP CCEEECCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH VVAIFSALGFLAAGWIVYDSLCRLLGNNDKVLGICVGLYVLIAAYLACHIFAGRAAYLIM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAMLATIMSANVFFVIIPGQRKMVDAMLKGDTPNPIYGKRGKQRSVHNTYFTLPVVFAML HHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH SNHYAMTYTHPYNWAVLVVIMLAGALIRQFFVMRHRGQVLWYLPLGGVALMFGALFWTMP CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCC RPVVPVAEAANAPVVKVGDIVPVLQQRCVACHSAHPTMMGSAPAGVLLDTPEEISTNAQR CCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHH IYQQAVTLKSMPLGNVTHMTDDERLKIAAWFHGGAH HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA