Click here to switch to the map view.

The map label for this gene is kfoC [H]

Identifier: 186475984

GI number: 186475984

Start: 1372697

End: 1373674

Strand: Direct

Name: kfoC [H]

Synonym: Bphy_1225

Alternate gene names: 186475984

Gene position: 1372697-1373674 (Clockwise)

Preceding gene: 186475983

Following gene: 186475989

Centisome position: 39.45

GC content: 61.66

Gene sequence:

>978_bases
ATGACGACATCCTGCAAGGTTTCTATTTGCGTGCCGACATACAACCGGCCTGAACTGCTTGTGGAATGTCTGGACTCGTG
TCTGGCGCAGACACATGCGAACATCGAAATACTGATCGGCGACGATTCGAGCGATACGCGCACACAGCAGCTGATCGCCG
CGCGCTACGCGCACGATGCGCGCATCCGGTACGTGAAGAACGGGCCATCGCTGGGTCAGGCGCGCAACGTCGCGAGTCTT
TTCGCACGCGCGACGGGTGACAAGATCGCGCTAATTCACGACGACGATTACTTCACGAGCGATGGCATCGAGACTCTGCT
CGCGCTGTGGCATCGGCATCCGCAGCTCGAGGTCGCGTTCGCCGACCAGTACGAAGTCGATGCACACGGCAATTTCGACG
CGACGACGAGCGCGGCCGTGAATGCGGCCTTCCATCGCAACACGGCGGCGCAAGGTCTGCAGAGGCAGCCGGGGCGCACG
GGACTCGTGCAGATGTTCCCAAATAACGGCTGGATGGCGAATGCGGATCTCGTCAAACGCATCAGCTATCGCGATGACGT
CGGTACGTGCTGCGACTACGTATTCGGCGCCGAGCTGTGCCTCGCCGCATCGCAGGTGTATTACCTGCATCGCTACGTAT
CGTACTACCGCAAGACCGACGTCTCGGTTTCGGGCCGCACGCGCGGCTCCGCATGCTCTGCTTCGTTGACGGCCTTCGAG
TTCGTGTCGCGGCTGACGCTCGATGCGTCGCTCGAACCTGCTCGCCGCCTCGCGTTGCGCAGGCTCGCGCCAAACGTCGT
CTCGCTGTATGCGAAGAACGATGCGCCGCTTGCAGCGCTGCGTGTGGCGTTCGTGCACCTGTACGCGTATGCGTACGGAC
TCGATGCGCGGCTCTACTATCATCTGTCGCTGATCGCACGCGCATGCATTCCGATGAAGTGGCGAGGACTGCCGCCATCT
GCCACGCGCTTTCCCTGA

Upstream 100 bases:

>100_bases
CTGGTTATTTTTCCGCGTCCTTCATCTACCTTGCCTCCAGGCGGCGGAACATCTCGTCACAGACATGCTCGCCGCCTCTG
ATATGGAGGGAGCGGAGACA

Downstream 100 bases:

>100_bases
GTGCGCACGCGCGAGCGTCAGGCGAAAAAAAGCGGCTCTATGGAAGAGCCGCTTCCGGTACTTCATGATCGCGCGTCAGG
CGCGACGCCTCACGGTTCGT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: CS; Chondroitin polymerase; Glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase; UDP-GalNAc transferase; N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase; UDP-GlcUA transferase [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTTSCKVSICVPTYNRPELLVECLDSCLAQTHANIEILIGDDSSDTRTQQLIAARYAHDARIRYVKNGPSLGQARNVASL
FARATGDKIALIHDDDYFTSDGIETLLALWHRHPQLEVAFADQYEVDAHGNFDATTSAAVNAAFHRNTAAQGLQRQPGRT
GLVQMFPNNGWMANADLVKRISYRDDVGTCCDYVFGAELCLAASQVYYLHRYVSYYRKTDVSVSGRTRGSACSASLTAFE
FVSRLTLDASLEPARRLALRRLAPNVVSLYAKNDAPLAALRVAFVHLYAYAYGLDARLYYHLSLIARACIPMKWRGLPPS
ATRFP

Sequences:

>Translated_325_residues
MTTSCKVSICVPTYNRPELLVECLDSCLAQTHANIEILIGDDSSDTRTQQLIAARYAHDARIRYVKNGPSLGQARNVASL
FARATGDKIALIHDDDYFTSDGIETLLALWHRHPQLEVAFADQYEVDAHGNFDATTSAAVNAAFHRNTAAQGLQRQPGRT
GLVQMFPNNGWMANADLVKRISYRDDVGTCCDYVFGAELCLAASQVYYLHRYVSYYRKTDVSVSGRTRGSACSASLTAFE
FVSRLTLDASLEPARRLALRRLAPNVVSLYAKNDAPLAALRVAFVHLYAYAYGLDARLYYHLSLIARACIPMKWRGLPPS
ATRFP
>Mature_324_residues
TTSCKVSICVPTYNRPELLVECLDSCLAQTHANIEILIGDDSSDTRTQQLIAARYAHDARIRYVKNGPSLGQARNVASLF
ARATGDKIALIHDDDYFTSDGIETLLALWHRHPQLEVAFADQYEVDAHGNFDATTSAAVNAAFHRNTAAQGLQRQPGRTG
LVQMFPNNGWMANADLVKRISYRDDVGTCCDYVFGAELCLAASQVYYLHRYVSYYRKTDVSVSGRTRGSACSASLTAFEF
VSRLTLDASLEPARRLALRRLAPNVVSLYAKNDAPLAALRVAFVHLYAYAYGLDARLYYHLSLIARACIPMKWRGLPPSA
TRFP

Specific function: Catalyzes the polymerization of chondroitin, a polysaccharide composed of a repeating disaccharide of N- acetylgalactosamine (GalNAc) and glucuronic acid (GlcUA) units. Each unit has the composition in beta-(1->4)-GlcUA-beta-(1->3)- GalNAc [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. CS/HAS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.4.1.175; =2.4.1.226 [H]

Molecular weight: Translated: 36040; Mature: 35909

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSCKVSICVPTYNRPELLVECLDSCLAQTHANIEILIGDDSSDTRTQQLIAARYAHDA
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
RIRYVKNGPSLGQARNVASLFARATGDKIALIHDDDYFTSDGIETLLALWHRHPQLEVAF
EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
ADQYEVDAHGNFDATTSAAVNAAFHRNTAAQGLQRQPGRTGLVQMFPNNGWMANADLVKR
CCCEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCEECHHHHHH
ISYRDDVGTCCDYVFGAELCLAASQVYYLHRYVSYYRKTDVSVSGRTRGSACSASLTAFE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHH
FVSRLTLDASLEPARRLALRRLAPNVVSLYAKNDAPLAALRVAFVHLYAYAYGLDARLYY
HHHHHHCCCCCCHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHH
HLSLIARACIPMKWRGLPPSATRFP
HHHHHHHHHCCCEECCCCCCCCCCC
>Mature Secondary Structure 
TTSCKVSICVPTYNRPELLVECLDSCLAQTHANIEILIGDDSSDTRTQQLIAARYAHDA
CCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
RIRYVKNGPSLGQARNVASLFARATGDKIALIHDDDYFTSDGIETLLALWHRHPQLEVAF
EEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEE
ADQYEVDAHGNFDATTSAAVNAAFHRNTAAQGLQRQPGRTGLVQMFPNNGWMANADLVKR
CCCEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCEECHHHHHH
ISYRDDVGTCCDYVFGAELCLAASQVYYLHRYVSYYRKTDVSVSGRTRGSACSASLTAFE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHH
FVSRLTLDASLEPARRLALRRLAPNVVSLYAKNDAPLAALRVAFVHLYAYAYGLDARLYY
HHHHHHCCCCCCHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHH
HLSLIARACIPMKWRGLPPSATRFP
HHHHHHHHHCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11943778 [H]