| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475972
Identifier: 186475972
GI number: 186475972
Start: 1364055
End: 1364822
Strand: Direct
Name: 186475972
Synonym: Bphy_1212
Alternate gene names: NA
Gene position: 1364055-1364822 (Clockwise)
Preceding gene: 186475971
Following gene: 186475973
Centisome position: 39.21
GC content: 61.72
Gene sequence:
>768_bases ATGAAGAAGCCCGCGTCTGCCCCTGTTGCGTCCGATACGCTCGTGGCCATCGGGTCCGAATTGCCGCTGCGTGCGCCAGA CCTCGCATCCGTGACGCTCGCGATGTCGATCGCGCTCGTTGCATGGCTCGCATTCGCCGCGCAGACGGACATCACCGTGC TTCGCATGCTGTCGCGAGGCTACGGCGTGCTCGGCGGCATCGAACGGCTGACCAGTTATCTAACCAACCTGACCATCTTC ACGTGCGCAGTGTGCTTCACATGTGTGGGGTTCTTCGCGCGCGGTAAGATGCCCATCGTGCGCTTCTTCCGCCAGCCAAC CGTCGTGACGGCCGTCACCTGCTACATCGTGTTCGTCGGCTTCGCGTATAACCTGCTGTTGCGGCATCTGTGGACGCCGT CGGGCTGGCGCATGGTGCTGAACGAAAGTCTGCATACGCTCGTCCCACTGCTCGACGCGCTTTACTGGCTGCTGTTCGTG CCGCGCTTTCATCTGACGCTGCGTCATCTGCTGTGGTGGCTCGTCTACCCGCTCGGCTATCTCGCGCTGACAATGGCGCG CGGTGCCGTGTCGGACTTCTATCCGTATCCTTTCATCGATGTCGGTGAACTCGGCTATGGACGCGTGTTCATCAACGCAA GCCTGCTCGTGCTGGCGTTTCTGCTGCTGGCGGCCGTGTTCGCGGCGATCAATCACCGACGGCCGATGCCATCCGTCGTC TCCCCATCTCGCTTGCAAGAGACCGATCATGACAACAACCCGGCGTGA
Upstream 100 bases:
>100_bases CCGGCACGCTGCGGGCCGGCTTCTTTTTTCCTGTCGCCCACGCCACTCCATGCCCGGTGTAGCGCCTGCACGGGCTGCTT CACGCGTATAGAATCGACGC
Downstream 100 bases:
>100_bases GTTCATCGTAGCGGGGCTCGGTTCCGCAGTCGGCCTGTGCGCGATACTCGCGGCAACGCTCGACGCGCGCGCCGATGACA AGCTCAGCGAAACCGACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKKPASAPVASDTLVAIGSELPLRAPDLASVTLAMSIALVAWLAFAAQTDITVLRMLSRGYGVLGGIERLTSYLTNLTIF TCAVCFTCVGFFARGKMPIVRFFRQPTVVTAVTCYIVFVGFAYNLLLRHLWTPSGWRMVLNESLHTLVPLLDALYWLLFV PRFHLTLRHLLWWLVYPLGYLALTMARGAVSDFYPYPFIDVGELGYGRVFINASLLVLAFLLLAAVFAAINHRRPMPSVV SPSRLQETDHDNNPA
Sequences:
>Translated_255_residues MKKPASAPVASDTLVAIGSELPLRAPDLASVTLAMSIALVAWLAFAAQTDITVLRMLSRGYGVLGGIERLTSYLTNLTIF TCAVCFTCVGFFARGKMPIVRFFRQPTVVTAVTCYIVFVGFAYNLLLRHLWTPSGWRMVLNESLHTLVPLLDALYWLLFV PRFHLTLRHLLWWLVYPLGYLALTMARGAVSDFYPYPFIDVGELGYGRVFINASLLVLAFLLLAAVFAAINHRRPMPSVV SPSRLQETDHDNNPA >Mature_255_residues MKKPASAPVASDTLVAIGSELPLRAPDLASVTLAMSIALVAWLAFAAQTDITVLRMLSRGYGVLGGIERLTSYLTNLTIF TCAVCFTCVGFFARGKMPIVRFFRQPTVVTAVTCYIVFVGFAYNLLLRHLWTPSGWRMVLNESLHTLVPLLDALYWLLFV PRFHLTLRHLLWWLVYPLGYLALTMARGAVSDFYPYPFIDVGELGYGRVFINASLLVLAFLLLAAVFAAINHRRPMPSVV SPSRLQETDHDNNPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28368; Mature: 28368
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPASAPVASDTLVAIGSELPLRAPDLASVTLAMSIALVAWLAFAAQTDITVLRMLSRG CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YGVLGGIERLTSYLTNLTIFTCAVCFTCVGFFARGKMPIVRFFRQPTVVTAVTCYIVFVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH FAYNLLLRHLWTPSGWRMVLNESLHTLVPLLDALYWLLFVPRFHLTLRHLLWWLVYPLGY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALTMARGAVSDFYPYPFIDVGELGYGRVFINASLLVLAFLLLAAVFAAINHRRPMPSVV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SPSRLQETDHDNNPA CCHHHHHCCCCCCCC >Mature Secondary Structure MKKPASAPVASDTLVAIGSELPLRAPDLASVTLAMSIALVAWLAFAAQTDITVLRMLSRG CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC YGVLGGIERLTSYLTNLTIFTCAVCFTCVGFFARGKMPIVRFFRQPTVVTAVTCYIVFVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH FAYNLLLRHLWTPSGWRMVLNESLHTLVPLLDALYWLLFVPRFHLTLRHLLWWLVYPLGY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALTMARGAVSDFYPYPFIDVGELGYGRVFINASLLVLAFLLLAAVFAAINHRRPMPSVV HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SPSRLQETDHDNNPA CCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA