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The map label for this gene is yhjK [C]

Identifier: 186475958

GI number: 186475958

Start: 1338799

End: 1339863

Strand: Reverse

Name: yhjK [C]

Synonym: Bphy_1193

Alternate gene names: 186475958

Gene position: 1339863-1338799 (Counterclockwise)

Preceding gene: 186475960

Following gene: 186475957

Centisome position: 38.51

GC content: 62.44

Gene sequence:

>1065_bases
ATGGAACGCTCATGTGCGGCGCCGACGTTTCGTGCGCGAAACGTTGTTGCGTTTTCTTCTCAGGCGAGCGCGGCGGGCGC
GGCCCCACAGGACGAGGCAGCATGCAGCTCACAGCGTGATCCGGCGCGTGCCGGAAGGTCATGGTATGAAACGTGCGTCC
ATTGGGAAAAGCCATCCAATACACAACCAGGATCGTCCCACACGATGGATGCTCGCCACGCTACCGCCGCACCTCGAGAG
CATAACGCCTGTGCGATAACGGGCTCGAATGACAACGCACATCTGCCGCGCCCGATGAGCGCGCTCGAACGGCGTGTCAG
CGAAGGGTTGCGCGGCGACGAATTTCCCCTCGCGTTTCAGGGTATTTACGATGTGAAGACGGGCAAGCTTGCGCGCGTCG
AAGCATTGATCCGCTGGATGCATCCGGACTACGGCATGCTGTTGCCAGATGCTTTTCTCGTCGCGCTCGACCACACCCTC
GTCGCATCGCAATTGACATACCACGTGATCGACGGTGCGTGCAGGACGATTGCAAACGCGCAGCGCACCGGTCAACACGT
GTGTCCCATTGCAGTCAACGTGCCGCCGCGCGTCGTTGCCGACGGACATTTTCCGGCAACCGTCATGCAGATCGCGCGCA
CGCATGACGTCGCGCCCGATCTGCTTGAACTTGAACTCGTCGAGACGGAAGACGCGACGCGCCTGCTGGCTGCACCGCCG
CTGACAAGACCGCTTCGTCAAGCGGGGATTCGCCTCGCGGTCGACGACTTCGGCACCGGCTATTCGTCGCTCGCGCTGCT
GAGTACGATCGATGTGGACACCGTGAAGGTCGCACGCGAGATGCTCGATGGGGTGCCTGACTGTCCGCGCGCATCGGCCG
TGGCGTCGAGCGTGTTGACGCTGCTCGAACGACTCGATGTCGCGGTGGTCGTGGAGGGTGTCGAAACGAGGGCGCTCGCG
CGTTGGCTCGCGCAATGGCCCAAGGTGCTCGCGCAAGGCTTCTTCTATGGGCGCCCGACTTTCGTTTACGCCGACGTCCC
CGTTGACGAACGATACGTCGCGTAA

Upstream 100 bases:

>100_bases
AGTGAGCTTCGTGATTCGCGCATGAAGCACTTTTGACAGTCCACCCACCGCGCGGTCAAGCGGGGCGACGCGCGCCGGAG
CGCGCGCAGGACCGCGGGCT

Downstream 100 bases:

>100_bases
GACTTGGGCAGGGCCGCTTTGCCTGCGGCGATCGCGCCGATGCGTCGCCGGGTGACGCGAGCGGGCATGTTCGCACACAT
CCGCAACGACCGCTCATCAA

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MERSCAAPTFRARNVVAFSSQASAAGAAPQDEAACSSQRDPARAGRSWYETCVHWEKPSNTQPGSSHTMDARHATAAPRE
HNACAITGSNDNAHLPRPMSALERRVSEGLRGDEFPLAFQGIYDVKTGKLARVEALIRWMHPDYGMLLPDAFLVALDHTL
VASQLTYHVIDGACRTIANAQRTGQHVCPIAVNVPPRVVADGHFPATVMQIARTHDVAPDLLELELVETEDATRLLAAPP
LTRPLRQAGIRLAVDDFGTGYSSLALLSTIDVDTVKVAREMLDGVPDCPRASAVASSVLTLLERLDVAVVVEGVETRALA
RWLAQWPKVLAQGFFYGRPTFVYADVPVDERYVA

Sequences:

>Translated_354_residues
MERSCAAPTFRARNVVAFSSQASAAGAAPQDEAACSSQRDPARAGRSWYETCVHWEKPSNTQPGSSHTMDARHATAAPRE
HNACAITGSNDNAHLPRPMSALERRVSEGLRGDEFPLAFQGIYDVKTGKLARVEALIRWMHPDYGMLLPDAFLVALDHTL
VASQLTYHVIDGACRTIANAQRTGQHVCPIAVNVPPRVVADGHFPATVMQIARTHDVAPDLLELELVETEDATRLLAAPP
LTRPLRQAGIRLAVDDFGTGYSSLALLSTIDVDTVKVAREMLDGVPDCPRASAVASSVLTLLERLDVAVVVEGVETRALA
RWLAQWPKVLAQGFFYGRPTFVYADVPVDERYVA
>Mature_354_residues
MERSCAAPTFRARNVVAFSSQASAAGAAPQDEAACSSQRDPARAGRSWYETCVHWEKPSNTQPGSSHTMDARHATAAPRE
HNACAITGSNDNAHLPRPMSALERRVSEGLRGDEFPLAFQGIYDVKTGKLARVEALIRWMHPDYGMLLPDAFLVALDHTL
VASQLTYHVIDGACRTIANAQRTGQHVCPIAVNVPPRVVADGHFPATVMQIARTHDVAPDLLELELVETEDATRLLAAPP
LTRPLRQAGIRLAVDDFGTGYSSLALLSTIDVDTVKVAREMLDGVPDCPRASAVASSVLTLLERLDVAVVVEGVETRALA
RWLAQWPKVLAQGFFYGRPTFVYADVPVDERYVA

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=253, Percent_Identity=29.2490118577075, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1788502, Length=241, Percent_Identity=28.2157676348548, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI87081743, Length=244, Percent_Identity=28.6885245901639, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1790496, Length=238, Percent_Identity=26.0504201680672, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI87081921, Length=234, Percent_Identity=26.4957264957265, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87081980, Length=247, Percent_Identity=28.7449392712551, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787055, Length=239, Percent_Identity=27.1966527196653, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787541, Length=238, Percent_Identity=24.3697478991597, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI87081845, Length=252, Percent_Identity=26.5873015873016, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786507, Length=256, Percent_Identity=25, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788849, Length=241, Percent_Identity=25.3112033195021, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082096, Length=202, Percent_Identity=22.2772277227723, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 38440; Mature: 38440

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSCAAPTFRARNVVAFSSQASAAGAAPQDEAACSSQRDPARAGRSWYETCVHWEKPSN
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
TQPGSSHTMDARHATAAPREHNACAITGSNDNAHLPRPMSALERRVSEGLRGDEFPLAFQ
CCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEC
GIYDVKTGKLARVEALIRWMHPDYGMLLPDAFLVALDHTLVASQLTYHVIDGACRTIANA
CEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTGQHVCPIAVNVPPRVVADGHFPATVMQIARTHDVAPDLLELELVETEDATRLLAAPP
HHCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHEECCCC
LTRPLRQAGIRLAVDDFGTGYSSLALLSTIDVDTVKVAREMLDGVPDCPRASAVASSVLT
CCHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LLERLDVAVVVEGVETRALARWLAQWPKVLAQGFFYGRPTFVYADVPVDERYVA
HHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MERSCAAPTFRARNVVAFSSQASAAGAAPQDEAACSSQRDPARAGRSWYETCVHWEKPSN
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
TQPGSSHTMDARHATAAPREHNACAITGSNDNAHLPRPMSALERRVSEGLRGDEFPLAFQ
CCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEC
GIYDVKTGKLARVEALIRWMHPDYGMLLPDAFLVALDHTLVASQLTYHVIDGACRTIANA
CEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTGQHVCPIAVNVPPRVVADGHFPATVMQIARTHDVAPDLLELELVETEDATRLLAAPP
HHCCCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHEECCCC
LTRPLRQAGIRLAVDDFGTGYSSLALLSTIDVDTVKVAREMLDGVPDCPRASAVASSVLT
CCHHHHHCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LLERLDVAVVVEGVETRALARWLAQWPKVLAQGFFYGRPTFVYADVPVDERYVA
HHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]