| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475956
Identifier: 186475956
GI number: 186475956
Start: 1337899
End: 1338270
Strand: Reverse
Name: 186475956
Synonym: Bphy_1191
Alternate gene names: NA
Gene position: 1338270-1337899 (Counterclockwise)
Preceding gene: 186475957
Following gene: 186475955
Centisome position: 38.47
GC content: 64.25
Gene sequence:
>372_bases ATGACCACTGAATTTCACCACGGCTCGTGCCATTGCGGCGCCGTCAGGTTCGAAGTCGAGACGCCCGTCACGCCGGCCGG GCGCTGCAACTGCAGCCTGTGCCGGCGCAAGGGCGCGCTGATGTCGCCGTTCTTTGCCGCCGGCGCGCTGCGCATCCTCG CCGGCCAGGACGACCTGACGCTCTACCAGTTCAACACGCGCGTTGCGAAGCATTACTTCTGCAAGCACTGCGGCATCTAT CCGTTTCATCAGACACGCAAGGATCCGAATCTGTGGCGCGTGAATATCGGCTGCCTCGACGGCGTGGACCCGTATGCGCT CGAGGCGTCGGTGGCGGACGGCAAGAGCCTGTCCGTGGTCGATGACGCGTAA
Upstream 100 bases:
>100_bases CGCGCGCCATTTTGTATCGCTGTACGCGGCAGATACATTGGGACACAAAGCGCGGGCGGCGCTCGCGTATAAATGAGGTC ATCGCATACAGGAGCATGCC
Downstream 100 bases:
>100_bases GATAAGCGAACCCCCGGCAGCCGAAGGAGCCTTGTGTGGATAAAACGGATCACGTTCTGATCGTCGACGACGACCGCGAC ATTCGTGAGCTGGTCGGCAC
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Plasmid PRiA4b ORF-3 Family Protein; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Inner Membrane Protein; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTTEFHHGSCHCGAVRFEVETPVTPAGRCNCSLCRRKGALMSPFFAAGALRILAGQDDLTLYQFNTRVAKHYFCKHCGIY PFHQTRKDPNLWRVNIGCLDGVDPYALEASVADGKSLSVVDDA
Sequences:
>Translated_123_residues MTTEFHHGSCHCGAVRFEVETPVTPAGRCNCSLCRRKGALMSPFFAAGALRILAGQDDLTLYQFNTRVAKHYFCKHCGIY PFHQTRKDPNLWRVNIGCLDGVDPYALEASVADGKSLSVVDDA >Mature_122_residues TTEFHHGSCHCGAVRFEVETPVTPAGRCNCSLCRRKGALMSPFFAAGALRILAGQDDLTLYQFNTRVAKHYFCKHCGIYP FHQTRKDPNLWRVNIGCLDGVDPYALEASVADGKSLSVVDDA
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56118234, Length=98, Percent_Identity=40.8163265306122, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25149380, Length=119, Percent_Identity=33.6134453781513, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25149382, Length=91, Percent_Identity=39.5604395604396, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13566; Mature: 13434
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEFHHGSCHCGAVRFEVETPVTPAGRCNCSLCRRKGALMSPFFAAGALRILAGQDDLT CCCCCCCCCEECEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHCCEEEEEECCCCEE LYQFNTRVAKHYFCKHCGIYPFHQTRKDPNLWRVNIGCLDGVDPYALEASVADGKSLSVV EEEECCHHHHHHHHHHCCCCCCHHCCCCCCEEEEEECEECCCCCCEEEEECCCCCEEEEE DDA ECC >Mature Secondary Structure TTEFHHGSCHCGAVRFEVETPVTPAGRCNCSLCRRKGALMSPFFAAGALRILAGQDDLT CCCCCCCCEECEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHCCEEEEEECCCCEE LYQFNTRVAKHYFCKHCGIYPFHQTRKDPNLWRVNIGCLDGVDPYALEASVADGKSLSVV EEEECCHHHHHHHHHHCCCCCCHHCCCCCCEEEEEECEECCCCCCEEEEECCCCCEEEEE DDA ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA