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The map label for this gene is 186475951

Identifier: 186475951

GI number: 186475951

Start: 1333297

End: 1333749

Strand: Reverse

Name: 186475951

Synonym: Bphy_1186

Alternate gene names: NA

Gene position: 1333749-1333297 (Counterclockwise)

Preceding gene: 186475952

Following gene: 186475947

Centisome position: 38.34

GC content: 63.8

Gene sequence:

>453_bases
ATGCGTCGTTTATCAGTCAGACGGTCGCCGATTCACGGCAAAGGTGTGTTCGCGCTATGCAGCCTCGCCGCGGGCGAACG
CATCATCGAATACAAAGGCGAGGTGACGTCGTGGCGACGCGCCGCGCGGCGCATCGAACGAGGCAGCGAGTACGGGCATA
CGTTCGTGTTCGGCCTGTCGGATGGACGGGTGATCGACGGCAGCGTCGGCGGCAATAGCGCGCGCTGGCTCAATCATGCG
TGCAAGGCCAATTGCGAGGCAGTCGAAATCGACGGGCGCGTATTCATCGAAGCCGCTGTCGATATCCAGGTCGGCGAAGA
ACTGTTCATCTCGTACGGACTGTCCGTCGAGGATCCGCAGGACGAGGAAACGCGACGCCAATACGTGTGCCGTTGCGGAT
CGCCTGCGTGCCGCGGCACGATGCTCGCCGCCGCGGACGAGGCGCGCGGCTGA

Upstream 100 bases:

>100_bases
GATCAGGATTCACACAAGAGGATCAACATACACACATCGATAACAGCCCATTTTTTTCGCGCTCTATACTGAGTCGATCC
ATCCTCTTCGAAAGCAGGCT

Downstream 100 bases:

>100_bases
GGGAGGGGCGCATTCGTGCGAGGCGTTGCGGGTGCGCGACTGCGCGGTCGGCAAAGGGCGGTTGCCCGCCTGTGATACAG
TGCGCGCAGCGTTCCAGAGA

Product: nuclear protein SET

Products: NA

Alternate protein names: SET Domain-Containing Protein; SET Domain Protein; Set Domain Protein; Histone-Lysine N-Methyltransferase; HistoNe-Lysine N-Methyltransferase H3 Lysine-4 Specific; Setd1a Protein; Nuclear Protein Set; Zinc Finger Protein

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRRLSVRRSPIHGKGVFALCSLAAGERIIEYKGEVTSWRRAARRIERGSEYGHTFVFGLSDGRVIDGSVGGNSARWLNHA
CKANCEAVEIDGRVFIEAAVDIQVGEELFISYGLSVEDPQDEETRRQYVCRCGSPACRGTMLAAADEARG

Sequences:

>Translated_150_residues
MRRLSVRRSPIHGKGVFALCSLAAGERIIEYKGEVTSWRRAARRIERGSEYGHTFVFGLSDGRVIDGSVGGNSARWLNHA
CKANCEAVEIDGRVFIEAAVDIQVGEELFISYGLSVEDPQDEETRRQYVCRCGSPACRGTMLAAADEARG
>Mature_150_residues
MRRLSVRRSPIHGKGVFALCSLAAGERIIEYKGEVTSWRRAARRIERGSEYGHTFVFGLSDGRVIDGSVGGNSARWLNHA
CKANCEAVEIDGRVFIEAAVDIQVGEELFISYGLSVEDPQDEETRRQYVCRCGSPACRGTMLAAADEARG

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56550039, Length=140, Percent_Identity=35.7142857142857, Blast_Score=89, Evalue=1e-18,
Organism=Homo sapiens, GI210032580, Length=141, Percent_Identity=34.7517730496454, Blast_Score=76, Evalue=1e-14,
Organism=Homo sapiens, GI55741677, Length=148, Percent_Identity=31.7567567567568, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI7662046, Length=141, Percent_Identity=34.0425531914894, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI110349788, Length=148, Percent_Identity=32.4324324324324, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI19923586, Length=142, Percent_Identity=32.3943661971831, Blast_Score=70, Evalue=6e-13,
Organism=Homo sapiens, GI27477095, Length=142, Percent_Identity=32.3943661971831, Blast_Score=70, Evalue=8e-13,
Organism=Homo sapiens, GI91718902, Length=140, Percent_Identity=32.1428571428571, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI19913358, Length=133, Percent_Identity=33.8345864661654, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI19913350, Length=133, Percent_Identity=33.8345864661654, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI19913348, Length=133, Percent_Identity=33.8345864661654, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI109633019, Length=133, Percent_Identity=33.8345864661654, Blast_Score=68, Evalue=3e-12,
Organism=Homo sapiens, GI19923202, Length=121, Percent_Identity=37.1900826446281, Blast_Score=67, Evalue=5e-12,
Organism=Homo sapiens, GI21361095, Length=121, Percent_Identity=36.3636363636364, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI23510384, Length=121, Percent_Identity=36.3636363636364, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17552320, Length=141, Percent_Identity=34.7517730496454, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17552318, Length=141, Percent_Identity=34.7517730496454, Blast_Score=81, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17552316, Length=141, Percent_Identity=34.7517730496454, Blast_Score=80, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193210440, Length=143, Percent_Identity=31.4685314685315, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71993684, Length=135, Percent_Identity=31.8518518518519, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6321911, Length=138, Percent_Identity=39.1304347826087, Blast_Score=86, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24639197, Length=139, Percent_Identity=35.9712230215827, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28571451, Length=139, Percent_Identity=35.9712230215827, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI62472551, Length=140, Percent_Identity=35, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17136558, Length=140, Percent_Identity=35, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19550181, Length=140, Percent_Identity=35, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19550184, Length=140, Percent_Identity=35, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17136556, Length=140, Percent_Identity=35, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17737643, Length=136, Percent_Identity=34.5588235294118, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16482; Mature: 16482

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: PS50280 SET ; PS50868 POST_SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLSVRRSPIHGKGVFALCSLAAGERIIEYKGEVTSWRRAARRIERGSEYGHTFVFGLS
CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECC
DGRVIDGSVGGNSARWLNHACKANCEAVEIDGRVFIEAAVDIQVGEELFISYGLSVEDPQ
CCEEEECCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEEEEEECCHHEEEEECCCCCCCC
DEETRRQYVCRCGSPACRGTMLAAADEARG
CHHHHHHHHHCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MRRLSVRRSPIHGKGVFALCSLAAGERIIEYKGEVTSWRRAARRIERGSEYGHTFVFGLS
CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECC
DGRVIDGSVGGNSARWLNHACKANCEAVEIDGRVFIEAAVDIQVGEELFISYGLSVEDPQ
CCEEEECCCCCCCHHHHHHHHHCCCCEEEECCEEEEEEEEEEECCHHEEEEECCCCCCCC
DEETRRQYVCRCGSPACRGTMLAAADEARG
CHHHHHHHHHCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA