| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is nreB [H]
Identifier: 186475910
GI number: 186475910
Start: 1285407
End: 1286879
Strand: Direct
Name: nreB [H]
Synonym: Bphy_1145
Alternate gene names: 186475910
Gene position: 1285407-1286879 (Clockwise)
Preceding gene: 186475909
Following gene: 186475911
Centisome position: 36.95
GC content: 59.54
Gene sequence:
>1473_bases ATGAATGCGCCCCCCGAAGTCCGGGTCCTGCTCGTTGAGGACAACCCGACGGACGCCCTGCTCATCGAGGAAGCACTGTC CGATGTGCTGGAATTCCAGCACCGCCTGTTCCATACAACCCTTTTGTCCGATGCGCTCGATCGTATTCAATCGATGCAAT TCGATATCGTGCTGCTGGATTTGGGATTGCCGGACGCACAAGGAATCGGCACGTTCAGAACCTTGCACCAGCATGCCGCC GAACTGCCCGTCCTGGTGCTGACGGGACTTGAAGACATGTCGGTGGGGGTGAAGGCTATCCAGGAGGGTGCACAGGACTA TCTGTCGAAGCGGGATATCAACTCATCGGAACTGGGTCGCGCCATACGCTACGCCATGGAGCGTCATCGGATTGCGATGG CGCTCAAGGAAAGCGAGGAACGGTTTCAGCTCGCAGTCAGGGGGGCAAGCGCCGGATTGTGGGACTGGAACCCGCAGACA GGCGCCGTTTATCTGTCGACCCAGTACAAGGAAATCATGGGGTACGAGGGGCATGAACTGCCCAACGACAGCCAGCCGAT TCTCGACTTTATCCATCCCGACGACATCGAACGGGTCAAAACCCACCTCGCCGCGCACCTCGCGCAAAAATGCAGCTATG AGATCGAATACCGGATACGTGTCAAGACGGGGCAGTACCGCTGGATGCACGCACGAGGCCAGGCGCTGTGGAATCAGGCC GGCGAACCCTACCGTATGGTTGGATGGATTATCGACGTCACCGAACGTCGGCTGGCCGACGAAGCACTGCGTGAGTCGCG CGAAGAACTGAAGCGGCTGTCGGCGAACATCCAGCGCGCCCGTGAGGAGGAAAAAGCCCGGATTGCACGTGAACTGCACG ACGATCTCGGTCAACAACTGGCTGCCCTCAAGATCGAATGCGCGAAAAACGGCAACCGCGCCACAGATATCGATGCGCCG AAAGCAGGCGCCGATATGAACAATATCTACGCGCTGATCGATCAACTGGTCGTCTCCGTACGACGCATAGCGACCGACCT GCGTCCCGCCATGCTTGACGATCTTGGACTGCTGCCCGCTATCGAGTGGTTTGTCGAACGGTTCTCGTCGCGATACCCGA TATCCGTCGTCCAGCACATCGACGCGGAGGATATCGACTTCAACCACGACAGCTCCACGGCCGTGTTCCGGATCGTCCAG GAGGCGCTCACCAACGTGGCGCGTCATGCGGGCGCGACCCAGGTCACGCTGGAGATTTCCAGCAGCGGATCGCATTGTAT TGTGCGGGTCGCCGACAACGGGCACGGTTGCCGGAACGATGTTCGACCGTCGCCAAGCTCATTCGGTTTAATCGGCATGC GGGAGCGCGCCGCAGCGTTGAGCGGCGAACTGATCGTCCAGACCGCTCCCGGCCAGGGCTTCGCACTCACCGTTTTGCTG CCACGCTTCGCGGTTGAGAACAAAAGCCCTTAG
Upstream 100 bases:
>100_bases GCTACATAACCAAGCCCGTCGACTTCACGCGGTTCGTCGAGGTTGTACGCAGAATCAGTGACTTCTGGTTCGGCGTGGTG ACTTTGCCCCCCGCCCGATC
Downstream 100 bases:
>100_bases GCCACACGGGGCCGTTGCATCCATTCAAGGCCTCGGCTAATTCTTCAGCACCGGATCGCAGTCGAGCACGCTTTGCACTC AGCGCCCCACGAAGGCGCCC
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: Nitrogen regulation protein B [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MNAPPEVRVLLVEDNPTDALLIEEALSDVLEFQHRLFHTTLLSDALDRIQSMQFDIVLLDLGLPDAQGIGTFRTLHQHAA ELPVLVLTGLEDMSVGVKAIQEGAQDYLSKRDINSSELGRAIRYAMERHRIAMALKESEERFQLAVRGASAGLWDWNPQT GAVYLSTQYKEIMGYEGHELPNDSQPILDFIHPDDIERVKTHLAAHLAQKCSYEIEYRIRVKTGQYRWMHARGQALWNQA GEPYRMVGWIIDVTERRLADEALRESREELKRLSANIQRAREEEKARIARELHDDLGQQLAALKIECAKNGNRATDIDAP KAGADMNNIYALIDQLVVSVRRIATDLRPAMLDDLGLLPAIEWFVERFSSRYPISVVQHIDAEDIDFNHDSSTAVFRIVQ EALTNVARHAGATQVTLEISSSGSHCIVRVADNGHGCRNDVRPSPSSFGLIGMRERAAALSGELIVQTAPGQGFALTVLL PRFAVENKSP
Sequences:
>Translated_490_residues MNAPPEVRVLLVEDNPTDALLIEEALSDVLEFQHRLFHTTLLSDALDRIQSMQFDIVLLDLGLPDAQGIGTFRTLHQHAA ELPVLVLTGLEDMSVGVKAIQEGAQDYLSKRDINSSELGRAIRYAMERHRIAMALKESEERFQLAVRGASAGLWDWNPQT GAVYLSTQYKEIMGYEGHELPNDSQPILDFIHPDDIERVKTHLAAHLAQKCSYEIEYRIRVKTGQYRWMHARGQALWNQA GEPYRMVGWIIDVTERRLADEALRESREELKRLSANIQRAREEEKARIARELHDDLGQQLAALKIECAKNGNRATDIDAP KAGADMNNIYALIDQLVVSVRRIATDLRPAMLDDLGLLPAIEWFVERFSSRYPISVVQHIDAEDIDFNHDSSTAVFRIVQ EALTNVARHAGATQVTLEISSSGSHCIVRVADNGHGCRNDVRPSPSSFGLIGMRERAAALSGELIVQTAPGQGFALTVLL PRFAVENKSP >Mature_490_residues MNAPPEVRVLLVEDNPTDALLIEEALSDVLEFQHRLFHTTLLSDALDRIQSMQFDIVLLDLGLPDAQGIGTFRTLHQHAA ELPVLVLTGLEDMSVGVKAIQEGAQDYLSKRDINSSELGRAIRYAMERHRIAMALKESEERFQLAVRGASAGLWDWNPQT GAVYLSTQYKEIMGYEGHELPNDSQPILDFIHPDDIERVKTHLAAHLAQKCSYEIEYRIRVKTGQYRWMHARGQALWNQA GEPYRMVGWIIDVTERRLADEALRESREELKRLSANIQRAREEEKARIARELHDDLGQQLAALKIECAKNGNRATDIDAP KAGADMNNIYALIDQLVVSVRRIATDLRPAMLDDLGLLPAIEWFVERFSSRYPISVVQHIDAEDIDFNHDSSTAVFRIVQ EALTNVARHAGATQVTLEISSSGSHCIVRVADNGHGCRNDVRPSPSSFGLIGMRERAAALSGELIVQTAPGQGFALTVLL PRFAVENKSP
Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxyg
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787474, Length=200, Percent_Identity=27.5, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI87082311, Length=222, Percent_Identity=31.981981981982, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR011712 - InterPro: IPR005467 - InterPro: IPR017203 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 54818; Mature: 54818
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPPEVRVLLVEDNPTDALLIEEALSDVLEFQHRLFHTTLLSDALDRIQSMQFDIVLLD CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE LGLPDAQGIGTFRTLHQHAAELPVLVLTGLEDMSVGVKAIQEGAQDYLSKRDINSSELGR CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIRYAMERHRIAMALKESEERFQLAVRGASAGLWDWNPQTGAVYLSTQYKEIMGYEGHEL HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCC PNDSQPILDFIHPDDIERVKTHLAAHLAQKCSYEIEYRIRVKTGQYRWMHARGQALWNQA CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEHHHHHHHHHCC GEPYRMVGWIIDVTERRLADEALRESREELKRLSANIQRAREEEKARIARELHDDLGQQL CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALKIECAKNGNRATDIDAPKAGADMNNIYALIDQLVVSVRRIATDLRPAMLDDLGLLPA HHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IEWFVERFSSRYPISVVQHIDAEDIDFNHDSSTAVFRIVQEALTNVARHAGATQVTLEIS HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEE SSGSHCIVRVADNGHGCRNDVRPSPSSFGLIGMRERAAALSGELIVQTAPGQGFALTVLL CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEECCCCCEEEEEEH PRFAVENKSP HHHHCCCCCC >Mature Secondary Structure MNAPPEVRVLLVEDNPTDALLIEEALSDVLEFQHRLFHTTLLSDALDRIQSMQFDIVLLD CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE LGLPDAQGIGTFRTLHQHAAELPVLVLTGLEDMSVGVKAIQEGAQDYLSKRDINSSELGR CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIRYAMERHRIAMALKESEERFQLAVRGASAGLWDWNPQTGAVYLSTQYKEIMGYEGHEL HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCC PNDSQPILDFIHPDDIERVKTHLAAHLAQKCSYEIEYRIRVKTGQYRWMHARGQALWNQA CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCEEEEHHHHHHHHHCC GEPYRMVGWIIDVTERRLADEALRESREELKRLSANIQRAREEEKARIARELHDDLGQQL CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALKIECAKNGNRATDIDAPKAGADMNNIYALIDQLVVSVRRIATDLRPAMLDDLGLLPA HHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IEWFVERFSSRYPISVVQHIDAEDIDFNHDSSTAVFRIVQEALTNVARHAGATQVTLEIS HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEE SSGSHCIVRVADNGHGCRNDVRPSPSSFGLIGMRERAAALSGELIVQTAPGQGFALTVLL CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCCEEEEECCCCCEEEEEEH PRFAVENKSP HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA