| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475901
Identifier: 186475901
GI number: 186475901
Start: 1278294
End: 1278740
Strand: Reverse
Name: 186475901
Synonym: Bphy_1136
Alternate gene names: NA
Gene position: 1278740-1278294 (Counterclockwise)
Preceding gene: 186475907
Following gene: 186475897
Centisome position: 36.75
GC content: 65.32
Gene sequence:
>447_bases ATGTACGACCGGATCCTTGTCGCGCTCGACGATAGCGCCAGCGCAGAGATGGCGCTGCGCGAGGCGGTCAGGCTCGCGAA ACAGTCCAGAGGCGTGGTGTATGCGCTGTCCGTGGTGGACCGTGGCCGATGGCCGGGGGAGGTGAGCGCACGGTTGGAGT TCGAACGGGAGCTCCCTGCCGCGCCAAACGTTGCCACTCGCATGTTCGACGTGGCAACCGAACTGTTCCAGGAGTCGGGC GTCACCGGGAAGACGCGGGCGATCGATGCATATGGCGAAAGCGTGTCGGAGGTAGTGGCACGCGCGGCCGAAGAATGCGA TGCCGATATTATCGTGATCGGTACGCATGGAAGGCGCGGCGCGCAGCGGTTCTTGCTCGGCAGCGTCGCAGAGTCGCTCG TGCGCTCGACGCAGCGGCCAGTTCTGCTACTCCGGCACGACGGCTAG
Upstream 100 bases:
>100_bases TCGGTTGACCTGAGTCAACCGGCGAGCGGGGCGCCGTCACACACTGCCATTCATGCAACTTTCGCTGCCGTTCGAGGTAG CCCACGTCTGGAGATGCACC
Downstream 100 bases:
>100_bases GCGCACGCCAACGAGCGTGCCCGGTCGCGACGCGGCGTCTTGCCCGTGCGATTGCTGCTCGCACGCGATTCATCCCGCGC TCTTTCCGAAGCGGCAATTT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Family Protein; Universal Stress Protein Family; Universal Stress Protein Uspa-Like Protein; Stress Response Protein; Universal Stress Protein UspA Family; Uspa Domain Protein; Transcriptional Regulator; Universal Stress; Universal Stress Protein Usp; Universelle Stress Protein; Universal Stress-Related Protein; Universal Stress Protein Uspa Family; UpsA Domain-Containing Protein; Universal Stress Protein Family Protein; Osmosensitive K+ Channel His Kinase Sensor
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPAAPNVATRMFDVATELFQESG VTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRGAQRFLLGSVAESLVRSTQRPVLLLRHDG
Sequences:
>Translated_148_residues MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPAAPNVATRMFDVATELFQESG VTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRGAQRFLLGSVAESLVRSTQRPVLLLRHDG >Mature_148_residues MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPAAPNVATRMFDVATELFQESG VTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRGAQRFLLGSVAESLVRSTQRPVLLLRHDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16144; Mature: 16144
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPA CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCHHEEEECCCCCC APNVATRMFDVATELFQESGVTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRG CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH AQRFLLGSVAESLVRSTQRPVLLLRHDG HHHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure MYDRILVALDDSASAEMALREAVRLAKQSRGVVYALSVVDRGRWPGEVSARLEFERELPA CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCCHHEEEECCCCCC APNVATRMFDVATELFQESGVTGKTRAIDAYGESVSEVVARAAEECDADIIVIGTHGRRG CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCH AQRFLLGSVAESLVRSTQRPVLLLRHDG HHHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA