Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475895

Identifier: 186475895

GI number: 186475895

Start: 1273866

End: 1274480

Strand: Direct

Name: 186475895

Synonym: Bphy_1130

Alternate gene names: NA

Gene position: 1273866-1274480 (Clockwise)

Preceding gene: 186475883

Following gene: 186475898

Centisome position: 36.61

GC content: 63.9

Gene sequence:

>615_bases
ATGATGAAAGCCTTGCTGATCATTCCCATCCTGTTTGCGCTGCATGCATTGGCCGGCTGCGGAATCGCCCCGTCGCTCCA
CGCGGATGAGCAGGTGAAGGCAGCCTTCTCCGATGTCATCACGCGCTACGACGAACGCCTCGGACTGGCCGATGAGGCCA
TCGCCCTCGCCCGCCACTATCTGCCCGCACAGGCATCGACATTCAAGGACATCGCCGACGCCCGTTCCGCCATCGAAGCC
TTGCATGCGACACCCGCTCTCGTCGACGAGCGTGCGTTGTTCGAGCGCTTCGATGTCGCGCAACGTCAGATGACAGAGGC
GATCTCGCAACTTCTCGTCGTGTGCGAATCCGTGCGCGGGCTCGACACGGCACCCCGCTTGCGGACGCTGCAGATGCGGC
TTGCGTCGTCGGCGGCGCGCATCGCGGCTGCGCGAGCGCGCTACGACGAAGCGGCGCTCCAATACAACGCATCACTGCAT
CGCTTTCCGTTCGATCTGGCTGCAGCCCTTCATGCCGATCAGGACAAACCCACTTTCTCCACCCAGGACCGCTCGCCTGT
TCACCGGCATCCGCGCACGGACTTCGGTACGCTGCGCGGCTCGCTGCGTGTCTGA

Upstream 100 bases:

>100_bases
GCGGTCCTCCGAAAACGTGCGGCGATTGACAGCGATCAATCCGTTATGTGCGAGGGCGTCTACGCTCGATCCGATAGCCC
GGACATGGAGCACGATCGAC

Downstream 100 bases:

>100_bases
CGGGCAAGCGAACGGCCATGCCGCTCTGTTTTCCGGCGCGGCGGACGGAACCCGTTGTTTAGACTCGATCTCGTCCGCTG
TCAGCGTACGCAACACTGCC

Product: LemA family protein

Products: NA

Alternate protein names: Lipoprotein; Signal Peptide; LemA Protein; Extracellular Antigen Protein Lysteria LemA Protein; Extracellular Antigen Protein Lysteria LemA; LemA Conserved Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHYLPAQASTFKDIADARSAIEA
LHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRGLDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLH
RFPFDLAAALHADQDKPTFSTQDRSPVHRHPRTDFGTLRGSLRV

Sequences:

>Translated_204_residues
MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHYLPAQASTFKDIADARSAIEA
LHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRGLDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLH
RFPFDLAAALHADQDKPTFSTQDRSPVHRHPRTDFGTLRGSLRV
>Mature_204_residues
MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHYLPAQASTFKDIADARSAIEA
LHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRGLDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLH
RFPFDLAAALHADQDKPTFSTQDRSPVHRHPRTDFGTLRGSLRV

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22442; Mature: 22442

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHY
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LPAQASTFKDIADARSAIEALHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRG
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLHRFPFDLAAALHADQDKPTFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCCCCCCC
TQDRSPVHRHPRTDFGTLRGSLRV
CCCCCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MMKALLIIPILFALHALAGCGIAPSLHADEQVKAAFSDVITRYDERLGLADEAIALARHY
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LPAQASTFKDIADARSAIEALHATPALVDERALFERFDVAQRQMTEAISQLLVVCESVRG
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDTAPRLRTLQMRLASSAARIAAARARYDEAALQYNASLHRFPFDLAAALHADQDKPTFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHCCCCCCCCC
TQDRSPVHRHPRTDFGTLRGSLRV
CCCCCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA