| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ppsA [H]
Identifier: 186475864
GI number: 186475864
Start: 1241387
End: 1243831
Strand: Reverse
Name: ppsA [H]
Synonym: Bphy_1099
Alternate gene names: 186475864
Gene position: 1243831-1241387 (Counterclockwise)
Preceding gene: 186475865
Following gene: 186475863
Centisome position: 35.75
GC content: 63.52
Gene sequence:
>2445_bases ATGAGCAGCAATGAAACGGAGGTCCTCTGGTTCGACGTGTTGCGCCGTACGGATGTGCCGTCCGTGGGCGGCAAGAATGC GTCGCTCGGGGAGATGGTCGGTTGCCTCGCCAGCAAGGGCATCCGTGTTCCACCCGGCTTCGCGACGACAGCCGGCGCGT ACTGGCAGTTCATCGACGCGAACGGGCTGCGCGAAAGCATGTCGACGGTGCTCGCGGAATTCCGCGCCAATCGCCGCTCG TTGGCCGATACGGGTGAAACGGTTCGCCGGGCAATCCTTCGGGGCGAATGGCCCGCCAGCACGACGCGCGCCATTTGCGA CGCGTATGCCGAACTCGGACGCCGCGTCGGCGTCGACGATCCGGATGTCGCCGTGCGTTCGAGCGCCACGGCTGAGGATT TACCCGACGCGAGCTTCGCGGGACAGCAGGAGACCTTGCTCGCCATTCATGGCACGCATGCGTTGATGGATGCATGCCGC CGGTGCTATGCCTCGCTATTCACGGATCGTGCCATCAGTTATCGCGAGGCACGAGGCTTCGATCACATGAAGGTTGCACT GTCGGTCGGCGTGCAGCAGATGGTGCGCTCGGATCTGGGTGGCGCGGGCGTCGCGTTTTCGATCGATACCGAAACGGGCT TCGACAAGATCGTATTGATCAGCGCGGCTTGGGGGCTCGGCGAGAACGTCGTGCAAGGCGCCGTCGATCCCGACGAATAT GAAGTATTCAAACCGCTTTTGCAGAACGAAGCGTGGGTGCCGATTGTCGGCAAGAAGCGCGGCAGCAAGCTGAAGAAAAT GGTGTACGCGAAAGGCGGCGCACATCCGACGAAGAACGTGCCGACTTCGAAAGCGGAGCGTGCGGCATTCGTCCTCGCCG ACCGCGACGTGCTCACGATTTCACGCTGGGCGTGCGAAATCGAATCGCACTACGGGCAGCCGATGGACATCGAATGGGCA AAGGACGGATTGACGGGAAACATCTTCATTGTCCAGGCGCGGCCCGAGACCGTCCAGTCGCGGCGTGAGGCGACCGCCGT CAAGACCTTCCGGCTCATATCGGCGGGACGCGAGCTTGTCACGGGCGTGAGCGTCGGCCAGGCTATCGCGGCCGGGAACG TGTGCGTCATCGACAGTCCTGCAGAGCGGGAGCGGTTCGTCGATGGCGCCGTGCTCGTGACGGCCGCGACGGATCCCGAC TGGGTGCCCGTGATGCGGCGCGCTGCAGGTATCGTGACGGACCACGGGGGCCGCACGTCGCACGCGGCGATTGTGAGCCG TGAACTGGGCCTTCCTGCCATCGTCGGCACGGGTCATGCCACGCGGGTGTTGCACGACGAGCAGGAAGTGACGGTGTCGT GCGCGCAAGGCGAAGTCGGGCGCGTGTTCGAAGGCATGGCGGACTACCAGGTCGAGGAGATCGACTTCGCGGCGATCCCG CAAACCCGAACCCAGGTCGTGCTGAATCTCGCGAACCCCGACGCCGCACTGCGCTGGTGGCGCATGCCGGCAGACGGCAT CGGCCTGGCGAGAATGGAGTTCGTGATCAGCAATCACATCAAGATTCATCCGATGGCGCTCGCGTGCTTTGACCAGTTGA AGGATGCCGAAGCGGCCCGGACAATCGCGGCGATGACGGAAGGGTACAGCGACAAGACGGAATACTTCGTCGACCGGCTT GCCTGCGGACTCGGCCGCATAGCGGCCGTGTGTTATCCGCGGCCCGTGGTGGTGCGTTTGAGCGACTTCAAGACGAACGA ATATGCGCACCTGACGGGAGGCAAGGCGTTCGAGCCGCTCGAGGAGAATCCGATGCTCGGCTTTCGCGGCGCATCGCGCT ATTACTCGCCGCGCTACGGTCCGGGCTTTGCACTCGAATGCCGTGCACTGCGCCGCCTGCGAATGGATATGGGCCTGAAC AACGTGATCGTCATGGTGCCGTTTTGCCGGACGCCGGACGAAGCGGATCGCGTCCTCGACGCGATGGCGGCCAATGGCCT CAGGCGCGCAGAGGACGGATTGCAGGTCTACGTGATGTGCGAGATTCCGTCGAACGTCATCCTCGCCGACGCGTTCGCGC AGCGGTTCGATGGGTTCTCGATCGGCAGCAACGATCTGACGCAACTCACGCTGGGCGTCGACCGGGACTCCGCAGAACTG GCATCGCTGTTCGACGAACGCAACGAAGCCGTGCGCTGGATGATCCGCGAAGTCATCGAACGGGCGCATCGAGCCGGTGC GAAAGTCAGCCTATGTGGCGAAGCGCCGAGTGTGCATCCCGAGTATGCAAGCTTTCTGGTGGAATGCGGCATCGACTCCA TCTCGGTGAGTCCCGACAGTTTCATCGCAGTCAAGCAGCACGTCGCGCAAGCGGAACGGGAAGCGGCGCATCGTGCGACG GGCGAGCAGACGCGCGGATCGATACTGTCTCAAACGGTGCGGTAG
Upstream 100 bases:
>100_bases TTTCCGCGCTGGCCAGATGAAGCTTCCGTGGATGTTCGCGGGATACGTCAGCATCTGAGAGAGACGGGAGCACGGGTGAC TCACCAGCGAGGAGCAGCCC
Downstream 100 bases:
>100_bases GGCCTTGTCATGATCGACGTTCTCACAGTCACCCTGAATCCCGCGGTCGATCTATCGACCTCTGTTGAGCGCATCGTGGA TACGCACAAGCTGCGATGCG
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 814; Mature: 813
Protein sequence:
>814_residues MSSNETEVLWFDVLRRTDVPSVGGKNASLGEMVGCLASKGIRVPPGFATTAGAYWQFIDANGLRESMSTVLAEFRANRRS LADTGETVRRAILRGEWPASTTRAICDAYAELGRRVGVDDPDVAVRSSATAEDLPDASFAGQQETLLAIHGTHALMDACR RCYASLFTDRAISYREARGFDHMKVALSVGVQQMVRSDLGGAGVAFSIDTETGFDKIVLISAAWGLGENVVQGAVDPDEY EVFKPLLQNEAWVPIVGKKRGSKLKKMVYAKGGAHPTKNVPTSKAERAAFVLADRDVLTISRWACEIESHYGQPMDIEWA KDGLTGNIFIVQARPETVQSRREATAVKTFRLISAGRELVTGVSVGQAIAAGNVCVIDSPAERERFVDGAVLVTAATDPD WVPVMRRAAGIVTDHGGRTSHAAIVSRELGLPAIVGTGHATRVLHDEQEVTVSCAQGEVGRVFEGMADYQVEEIDFAAIP QTRTQVVLNLANPDAALRWWRMPADGIGLARMEFVISNHIKIHPMALACFDQLKDAEAARTIAAMTEGYSDKTEYFVDRL ACGLGRIAAVCYPRPVVVRLSDFKTNEYAHLTGGKAFEPLEENPMLGFRGASRYYSPRYGPGFALECRALRRLRMDMGLN NVIVMVPFCRTPDEADRVLDAMAANGLRRAEDGLQVYVMCEIPSNVILADAFAQRFDGFSIGSNDLTQLTLGVDRDSAEL ASLFDERNEAVRWMIREVIERAHRAGAKVSLCGEAPSVHPEYASFLVECGIDSISVSPDSFIAVKQHVAQAEREAAHRAT GEQTRGSILSQTVR
Sequences:
>Translated_814_residues MSSNETEVLWFDVLRRTDVPSVGGKNASLGEMVGCLASKGIRVPPGFATTAGAYWQFIDANGLRESMSTVLAEFRANRRS LADTGETVRRAILRGEWPASTTRAICDAYAELGRRVGVDDPDVAVRSSATAEDLPDASFAGQQETLLAIHGTHALMDACR RCYASLFTDRAISYREARGFDHMKVALSVGVQQMVRSDLGGAGVAFSIDTETGFDKIVLISAAWGLGENVVQGAVDPDEY EVFKPLLQNEAWVPIVGKKRGSKLKKMVYAKGGAHPTKNVPTSKAERAAFVLADRDVLTISRWACEIESHYGQPMDIEWA KDGLTGNIFIVQARPETVQSRREATAVKTFRLISAGRELVTGVSVGQAIAAGNVCVIDSPAERERFVDGAVLVTAATDPD WVPVMRRAAGIVTDHGGRTSHAAIVSRELGLPAIVGTGHATRVLHDEQEVTVSCAQGEVGRVFEGMADYQVEEIDFAAIP QTRTQVVLNLANPDAALRWWRMPADGIGLARMEFVISNHIKIHPMALACFDQLKDAEAARTIAAMTEGYSDKTEYFVDRL ACGLGRIAAVCYPRPVVVRLSDFKTNEYAHLTGGKAFEPLEENPMLGFRGASRYYSPRYGPGFALECRALRRLRMDMGLN NVIVMVPFCRTPDEADRVLDAMAANGLRRAEDGLQVYVMCEIPSNVILADAFAQRFDGFSIGSNDLTQLTLGVDRDSAEL ASLFDERNEAVRWMIREVIERAHRAGAKVSLCGEAPSVHPEYASFLVECGIDSISVSPDSFIAVKQHVAQAEREAAHRAT GEQTRGSILSQTVR >Mature_813_residues SSNETEVLWFDVLRRTDVPSVGGKNASLGEMVGCLASKGIRVPPGFATTAGAYWQFIDANGLRESMSTVLAEFRANRRSL ADTGETVRRAILRGEWPASTTRAICDAYAELGRRVGVDDPDVAVRSSATAEDLPDASFAGQQETLLAIHGTHALMDACRR CYASLFTDRAISYREARGFDHMKVALSVGVQQMVRSDLGGAGVAFSIDTETGFDKIVLISAAWGLGENVVQGAVDPDEYE VFKPLLQNEAWVPIVGKKRGSKLKKMVYAKGGAHPTKNVPTSKAERAAFVLADRDVLTISRWACEIESHYGQPMDIEWAK DGLTGNIFIVQARPETVQSRREATAVKTFRLISAGRELVTGVSVGQAIAAGNVCVIDSPAERERFVDGAVLVTAATDPDW VPVMRRAAGIVTDHGGRTSHAAIVSRELGLPAIVGTGHATRVLHDEQEVTVSCAQGEVGRVFEGMADYQVEEIDFAAIPQ TRTQVVLNLANPDAALRWWRMPADGIGLARMEFVISNHIKIHPMALACFDQLKDAEAARTIAAMTEGYSDKTEYFVDRLA CGLGRIAAVCYPRPVVVRLSDFKTNEYAHLTGGKAFEPLEENPMLGFRGASRYYSPRYGPGFALECRALRRLRMDMGLNN VIVMVPFCRTPDEADRVLDAMAANGLRRAEDGLQVYVMCEIPSNVILADAFAQRFDGFSIGSNDLTQLTLGVDRDSAELA SLFDERNEAVRWMIREVIERAHRAGAKVSLCGEAPSVHPEYASFLVECGIDSISVSPDSFIAVKQHVAQAEREAAHRATG EQTRGSILSQTVR
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=803, Percent_Identity=48.692403486924, Blast_Score=754, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=436, Percent_Identity=26.1467889908257, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI1788726, Length=232, Percent_Identity=29.7413793103448, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI48994992, Length=407, Percent_Identity=26.7813267813268, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1789193, Length=420, Percent_Identity=26.1904761904762, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17564524, Length=226, Percent_Identity=27.8761061946903, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 88637; Mature: 88505
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNETEVLWFDVLRRTDVPSVGGKNASLGEMVGCLASKGIRVPPGFATTAGAYWQFIDA CCCCCCEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC NGLRESMSTVLAEFRANRRSLADTGETVRRAILRGEWPASTTRAICDAYAELGRRVGVDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC PDVAVRSSATAEDLPDASFAGQQETLLAIHGTHALMDACRRCYASLFTDRAISYREARGF CCCCEECCCCHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHMKVALSVGVQQMVRSDLGGAGVAFSIDTETGFDKIVLISAAWGLGENVVQGAVDPDEY CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHCCCCCHHH EVFKPLLQNEAWVPIVGKKRGSKLKKMVYAKGGAHPTKNVPTSKAERAAFVLADRDVLTI HHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCEEEEEECCCEEEH SRWACEIESHYGQPMDIEWAKDGLTGNIFIVQARPETVQSRREATAVKTFRLISAGRELV HHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHH TGVSVGQAIAAGNVCVIDSPAERERFVDGAVLVTAATDPDWVPVMRRAAGIVTDHGGRTS HHHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEECCCCCCC HAAIVSRELGLPAIVGTGHATRVLHDEQEVTVSCAQGEVGRVFEGMADYQVEEIDFAAIP HHHHHHHHCCCCEEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCEEHHCCEEECC QTRTQVVLNLANPDAALRWWRMPADGIGLARMEFVISNHIKIHPMALACFDQLKDAEAAR CCCEEEEEEECCCCHHHEEECCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH TIAAMTEGYSDKTEYFVDRLACGLGRIAAVCYPRPVVVRLSDFKTNEYAHLTGGKAFEPL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCC EENPMLGFRGASRYYSPRYGPGFALECRALRRLRMDMGLNNVIVMVPFCRTPDEADRVLD CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH AMAANGLRRAEDGLQVYVMCEIPSNVILADAFAQRFDGFSIGSNDLTQLTLGVDRDSAEL HHHHCCCHHCCCCCEEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHH ASLFDERNEAVRWMIREVIERAHRAGAKVSLCGEAPSVHPEYASFLVECGIDSISVSPDS HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEECCCCH FIAVKQHVAQAEREAAHRATGEQTRGSILSQTVR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure SSNETEVLWFDVLRRTDVPSVGGKNASLGEMVGCLASKGIRVPPGFATTAGAYWQFIDA CCCCCEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC NGLRESMSTVLAEFRANRRSLADTGETVRRAILRGEWPASTTRAICDAYAELGRRVGVDD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC PDVAVRSSATAEDLPDASFAGQQETLLAIHGTHALMDACRRCYASLFTDRAISYREARGF CCCCEECCCCHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DHMKVALSVGVQQMVRSDLGGAGVAFSIDTETGFDKIVLISAAWGLGENVVQGAVDPDEY CHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHCCCCCHHH EVFKPLLQNEAWVPIVGKKRGSKLKKMVYAKGGAHPTKNVPTSKAERAAFVLADRDVLTI HHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCEEEEEECCCEEEH SRWACEIESHYGQPMDIEWAKDGLTGNIFIVQARPETVQSRREATAVKTFRLISAGRELV HHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHH TGVSVGQAIAAGNVCVIDSPAERERFVDGAVLVTAATDPDWVPVMRRAAGIVTDHGGRTS HHHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEECCCCCCC HAAIVSRELGLPAIVGTGHATRVLHDEQEVTVSCAQGEVGRVFEGMADYQVEEIDFAAIP HHHHHHHHCCCCEEEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHCCEEHHCCEEECC QTRTQVVLNLANPDAALRWWRMPADGIGLARMEFVISNHIKIHPMALACFDQLKDAEAAR CCCEEEEEEECCCCHHHEEECCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH TIAAMTEGYSDKTEYFVDRLACGLGRIAAVCYPRPVVVRLSDFKTNEYAHLTGGKAFEPL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCCC EENPMLGFRGASRYYSPRYGPGFALECRALRRLRMDMGLNNVIVMVPFCRTPDEADRVLD CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH AMAANGLRRAEDGLQVYVMCEIPSNVILADAFAQRFDGFSIGSNDLTQLTLGVDRDSAEL HHHHCCCHHCCCCCEEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHH ASLFDERNEAVRWMIREVIERAHRAGAKVSLCGEAPSVHPEYASFLVECGIDSISVSPDS HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEECCCCH FIAVKQHVAQAEREAAHRATGEQTRGSILSQTVR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]