| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is tesA [H]
Identifier: 186475782
GI number: 186475782
Start: 1141937
End: 1142581
Strand: Reverse
Name: tesA [H]
Synonym: Bphy_1017
Alternate gene names: 186475782
Gene position: 1142581-1141937 (Counterclockwise)
Preceding gene: 186475784
Following gene: 186475781
Centisome position: 32.84
GC content: 64.03
Gene sequence:
>645_bases ATGCCCGCTCATGCAACGGGCGACACGAGCGCGGGTGCGGCGGCAGCAACCCGAAGCGCGGCAGGCAGTAACGCACAATC GTCGAAGCCGACCATCGTCGTACTTGGCGACAGCCTCTCCGCCGAATACGGCTTGCCCCGGGACACGGGCTGGGTTTCCT TGATGCGCCAGCGACTGTCGAATGCGCAGATCGATTATAACGTTGCGAATGCGAGCATCAGCGGCGACACCACGAGCGGC GGGCGCGCCCGCTTGCCCGCGCTGATGCAACGGCTCAAGCCGGCCATCGTAATCGTCGAGCTCGGCGCCAACGACGCGCT GCGCGGTGTCCCGCTGAGCACGACGGAAGACAACCTGCGCACGATCGTCGAACAGGCCCAGCAAGGACACGCGAAGGTTC TGCTCGTCGGGATGTACGTGCCGCCCAACTACGGGCCCGACTACACGCAGAAGTTCCACGCCCTCTATGGACAACTGTCG AAGCAGTTGCGCGTGCCGCTCGTCCCATTCCTCCTCGCCGGAATCGAAGACAAGCCAGACATGTTCCAGTCTGATCAGAT TCATCCGACGCAACGGGCACAGCCCCTGCTACTGGACAACGTGTGGCCGGCGCTGAAGCCGCTGCTCCACACCTCGCCCC AATGA
Upstream 100 bases:
>100_bases CTTTGACATGGTGAAGCGTAGATTGAAAGTACGCGCCATTTCGTTCGTGACAGCGCTGACGGCAGCCTGTTTCCCTATCC TGCTCGCCGCGACTTTCTCG
Downstream 100 bases:
>100_bases GCGCGTTGCCGAGAAAGAGACGGCGCGCGCGGACAACCGGTTTTCCAAACGATTGGGAAACGTGACCAGGTACGGTCGGT TCAGATAGGTGATTGCATGA
Product: lysophospholipase
Products: NA
Alternate protein names: Lecithinase B; Lysophospholipase L1; Protease I [H]
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MPAHATGDTSAGAAAATRSAAGSNAQSSKPTIVVLGDSLSAEYGLPRDTGWVSLMRQRLSNAQIDYNVANASISGDTTSG GRARLPALMQRLKPAIVIVELGANDALRGVPLSTTEDNLRTIVEQAQQGHAKVLLVGMYVPPNYGPDYTQKFHALYGQLS KQLRVPLVPFLLAGIEDKPDMFQSDQIHPTQRAQPLLLDNVWPALKPLLHTSPQ
Sequences:
>Translated_214_residues MPAHATGDTSAGAAAATRSAAGSNAQSSKPTIVVLGDSLSAEYGLPRDTGWVSLMRQRLSNAQIDYNVANASISGDTTSG GRARLPALMQRLKPAIVIVELGANDALRGVPLSTTEDNLRTIVEQAQQGHAKVLLVGMYVPPNYGPDYTQKFHALYGQLS KQLRVPLVPFLLAGIEDKPDMFQSDQIHPTQRAQPLLLDNVWPALKPLLHTSPQ >Mature_213_residues PAHATGDTSAGAAAATRSAAGSNAQSSKPTIVVLGDSLSAEYGLPRDTGWVSLMRQRLSNAQIDYNVANASISGDTTSGG RARLPALMQRLKPAIVIVELGANDALRGVPLSTTEDNLRTIVEQAQQGHAKVLLVGMYVPPNYGPDYTQKFHALYGQLSK QLRVPLVPFLLAGIEDKPDMFQSDQIHPTQRAQPLLLDNVWPALKPLLHTSPQ
Specific function: Hydrolyzes only long chain acyl thioesters (C12-C18). Specificity similar to chymotrypsin [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=180, Percent_Identity=42.2222222222222, Blast_Score=144, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.5 [H]
Molecular weight: Translated: 22913; Mature: 22782
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAHATGDTSAGAAAATRSAAGSNAQSSKPTIVVLGDSLSAEYGLPRDTGWVSLMRQRLS CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHC NAQIDYNVANASISGDTTSGGRARLPALMQRLKPAIVIVELGANDALRGVPLSTTEDNLR CCEEEEEECCCEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHH TIVEQAQQGHAKVLLVGMYVPPNYGPDYTQKFHALYGQLSKQLRVPLVPFLLAGIEDKPD HHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC MFQSDQIHPTQRAQPLLLDNVWPALKPLLHTSPQ CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PAHATGDTSAGAAAATRSAAGSNAQSSKPTIVVLGDSLSAEYGLPRDTGWVSLMRQRLS CCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHC NAQIDYNVANASISGDTTSGGRARLPALMQRLKPAIVIVELGANDALRGVPLSTTEDNLR CCEEEEEECCCEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHH TIVEQAQQGHAKVLLVGMYVPPNYGPDYTQKFHALYGQLSKQLRVPLVPFLLAGIEDKPD HHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC MFQSDQIHPTQRAQPLLLDNVWPALKPLLHTSPQ CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]