| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is glxK [H]
Identifier: 186475774
GI number: 186475774
Start: 1130498
End: 1131643
Strand: Reverse
Name: glxK [H]
Synonym: Bphy_1009
Alternate gene names: 186475774
Gene position: 1131643-1130498 (Counterclockwise)
Preceding gene: 186475781
Following gene: 186475773
Centisome position: 32.53
GC content: 69.55
Gene sequence:
>1146_bases ATGCCGAATACGTCGTCCGCGCCCATCGTCGTCATCGCCCCCGACTCGTTCAAAGGTTCGCTTTCGGCCGAGCAGGTCGC GCAGTCCATCGCGACGGGCATTCTGCGCGCGCGGTCCGACGCCACGATCCGCATTTGCGCGATGGCCGACGGCGGTGAAG GCACGCTCGACGCGATGCTGACCCGCGGCGGCGAACGCCGCATGCTGACCGTGCGCGGTGCGGCCGGCCCCGCCCGCGAG GCCGCGACGGGCTTGCTCGCGGACGGCAGCGCGATCATCGAAACAGCGGAAGTCGTCGGCATCACGGACCCGGTCGGCAT GGGCGTTCCCGTCGAAAAACGCGGGACGCGCGGCGTGGGCGAGGCGATCCGCTCGCTGCTCGACGCCGGCGTGCGGCGCT TCTTCGTCGCGCTCGGCGGCAGCAGCACGAACGACGGCGGAGCTGGCCTGCTCGTCGGGCTCGGCCTCAAGCTGTTCGAT GCGCAGGGACATGAGCTCGACGCCACGCCTGAACAGCTTGCGCAACTGGCGCGCGTCGACGCATCGGGGCTCGATGCGCG TCTGCGCGAAGCGACATTCGTCGGCATGTCGGATGTCGACAACCCGCTTACCGGCGATCACGGCGCAACCGCAGTCTTCG GGCCGCAGAAGGGCGTGCAGCCGGAACAGGTCGGCGCGATCGATGCCGCCCTCGCCCGCTTCGCCGATCTGGTCGAACCG GCGATGAATCGTGTCGCGCGCAACCAGCCTGGCGCGGGCGCCGCGGGCGGCCTGGGTTTTGCACTGCATCTGCTGGGCGC GGACTTCGAACCGGGTGCCGAAGTCGTCGCGCGCGAGGTCGGTCTGGATGCCGCACTCCAAGGCGCGAACTGGCTGATCA CGGGGGAAGGTCGTTCCGACGTACAAACGCTGCACGGCAAGGCGCCCTTCATCGCATGCCGGCATGCGTGCGCGGCGGGC GTGCCGGCCACGCTGCTTTCGGGTGCCGTCGACTCGTCCGCGTTGCCCAAGCTCGCAGAGCACTTCAGCGGATGCTTCTC GCCAGCCCCCGGCCCGATCACGCTCGAAGTGGCGATTCGCGACGCAGCCACGCTGCTTGCAAACGAAGCCGAGCAGATGA CGCGACTCAGGTACGGCCCGCGTTGA
Upstream 100 bases:
>100_bases CCACATCCCGGCACGCCTGCCCTTCACGGACGGACGTCCCGGCGCTTCAGCATCGCGGCAGCGGTAGCGATGCCTCCTTA TACCAATCATCTGAGACACC
Downstream 100 bases:
>100_bases CCGCGCGAGCGGATGCAGCAACAATCACATCGCGGGACTGCATCCACTCACAACAGGAAGACCATGAAGGCCTCCGACAA AGCCGGACTCGAACAGTTTC
Product: glycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPNTSSAPIVVIAPDSFKGSLSAEQVAQSIATGILRARSDATIRICAMADGGEGTLDAMLTRGGERRMLTVRGAAGPARE AATGLLADGSAIIETAEVVGITDPVGMGVPVEKRGTRGVGEAIRSLLDAGVRRFFVALGGSSTNDGGAGLLVGLGLKLFD AQGHELDATPEQLAQLARVDASGLDARLREATFVGMSDVDNPLTGDHGATAVFGPQKGVQPEQVGAIDAALARFADLVEP AMNRVARNQPGAGAAGGLGFALHLLGADFEPGAEVVAREVGLDAALQGANWLITGEGRSDVQTLHGKAPFIACRHACAAG VPATLLSGAVDSSALPKLAEHFSGCFSPAPGPITLEVAIRDAATLLANEAEQMTRLRYGPR
Sequences:
>Translated_381_residues MPNTSSAPIVVIAPDSFKGSLSAEQVAQSIATGILRARSDATIRICAMADGGEGTLDAMLTRGGERRMLTVRGAAGPARE AATGLLADGSAIIETAEVVGITDPVGMGVPVEKRGTRGVGEAIRSLLDAGVRRFFVALGGSSTNDGGAGLLVGLGLKLFD AQGHELDATPEQLAQLARVDASGLDARLREATFVGMSDVDNPLTGDHGATAVFGPQKGVQPEQVGAIDAALARFADLVEP AMNRVARNQPGAGAAGGLGFALHLLGADFEPGAEVVAREVGLDAALQGANWLITGEGRSDVQTLHGKAPFIACRHACAAG VPATLLSGAVDSSALPKLAEHFSGCFSPAPGPITLEVAIRDAATLLANEAEQMTRLRYGPR >Mature_380_residues PNTSSAPIVVIAPDSFKGSLSAEQVAQSIATGILRARSDATIRICAMADGGEGTLDAMLTRGGERRMLTVRGAAGPAREA ATGLLADGSAIIETAEVVGITDPVGMGVPVEKRGTRGVGEAIRSLLDAGVRRFFVALGGSSTNDGGAGLLVGLGLKLFDA QGHELDATPEQLAQLARVDASGLDARLREATFVGMSDVDNPLTGDHGATAVFGPQKGVQPEQVGAIDAALARFADLVEPA MNRVARNQPGAGAAGGLGFALHLLGADFEPGAEVVAREVGLDAALQGANWLITGEGRSDVQTLHGKAPFIACRHACAAGV PATLLSGAVDSSALPKLAEHFSGCFSPAPGPITLEVAIRDAATLLANEAEQMTRLRYGPR
Specific function: Unknown
COG id: COG1929
COG function: function code G; Glycerate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerate kinase type-1 family [H]
Homologues:
Organism=Escherichia coli, GI145693185, Length=310, Percent_Identity=39.6774193548387, Blast_Score=191, Evalue=6e-50, Organism=Escherichia coli, GI1786724, Length=329, Percent_Identity=41.0334346504559, Blast_Score=186, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018193 - InterPro: IPR004381 [H]
Pfam domain/function: PF02595 Gly_kinase [H]
EC number: =2.7.1.31 [H]
Molecular weight: Translated: 38765; Mature: 38634
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTSSAPIVVIAPDSFKGSLSAEQVAQSIATGILRARSDATIRICAMADGGEGTLDAML CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHH TRGGERRMLTVRGAAGPAREAATGLLADGSAIIETAEVVGITDPVGMGVPVEKRGTRGVG HCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCHH EAIRSLLDAGVRRFFVALGGSSTNDGGAGLLVGLGLKLFDAQGHELDATPEQLAQLARVD HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCEEEECCCCCCCCCCHHHHHHHHHCC ASGLDARLREATFVGMSDVDNPLTGDHGATAVFGPQKGVQPEQVGAIDAALARFADLVEP CCCCHHHHHHHEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH AMNRVARNQPGAGAAGGLGFALHLLGADFEPGAEVVAREVGLDAALQGANWLITGEGRSD HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCEEEECCCCHH VQTLHGKAPFIACRHACAAGVPATLLSGAVDSSALPKLAEHFSGCFSPAPGPITLEVAIR HHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEH DAATLLANEAEQMTRLRYGPR HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PNTSSAPIVVIAPDSFKGSLSAEQVAQSIATGILRARSDATIRICAMADGGEGTLDAML CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHH TRGGERRMLTVRGAAGPAREAATGLLADGSAIIETAEVVGITDPVGMGVPVEKRGTRGVG HCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCHH EAIRSLLDAGVRRFFVALGGSSTNDGGAGLLVGLGLKLFDAQGHELDATPEQLAQLARVD HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCEEEECCCCCCCCCCHHHHHHHHHCC ASGLDARLREATFVGMSDVDNPLTGDHGATAVFGPQKGVQPEQVGAIDAALARFADLVEP CCCCHHHHHHHEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH AMNRVARNQPGAGAAGGLGFALHLLGADFEPGAEVVAREVGLDAALQGANWLITGEGRSD HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCEEEECCCCHH VQTLHGKAPFIACRHACAAGVPATLLSGAVDSSALPKLAEHFSGCFSPAPGPITLEVAIR HHHHCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEH DAATLLANEAEQMTRLRYGPR HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377; 3020045 [H]