| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475770
Identifier: 186475770
GI number: 186475770
Start: 1126329
End: 1127495
Strand: Direct
Name: 186475770
Synonym: Bphy_1005
Alternate gene names: NA
Gene position: 1126329-1127495 (Clockwise)
Preceding gene: 186475769
Following gene: 186475775
Centisome position: 32.37
GC content: 65.12
Gene sequence:
>1167_bases GTGAAACGACGCGACTTCATATCGATGGCAGCGGCGGCAGGTGCCTCCTTGTCGGTGTCGCGCGTATTCGCGACGCCACA GACCGGTGGCGGCATATTGCCGCAACTGCATGCACGCAAAACCGCTCGCGACGCGTTCGGCAAGCTGTTGATCCTGATCG AACTCAAGGGCGGCAACGACGGACTGAACACCGTCATTCCTTTTACCGATTCCAGGTACTACGCGCTGCGCACGCACATC GCGATACCGCGCAATCGTGGGCTTGCGATAGATGGTCGAACCGCGCTGCATCCGGCGATGCGTGAACTGCTTCCTTTGTG GCGCGATGGGCAACTGGCTGTCGTGCAGGGCGTCGGTTGCGGGCGCGACGATGCATCGCATTTTCGTTCGACGGAGATCT GGCATACGGCGTCGCGCGCCGACGAATATCGGCGCGATGGCTGGCTGACGCGTGTCGCCGTGCAGTGCGGCGCTGTGAAC GGGCGCTTCGCGGCGGCGTCGTTCGGCAGTGACGAGCCGGGGCCATTTGCGCAATTGGCGCATCGCTGCGGGGACGAACA TTCGTGGTCACGTGTCGACGACCCCGACACCTTGGCTCACGTCGGTCGGCCGGATGTGGGCGAGGGTGCGGGGGATCGCG TTCCGGGCACGACGCTCGATGCAGCGCACGCCGGCGTGCGCTTGTTTCGCGATTCGATCGCGGCAGCGCTGCGCACGGTC GATATGATGCAGCCGCATATGCGCGGTGCGATTCGCGTGACGCTCGATGGCTTCGACACACATCGGAACCAGCTGACCCG GCATGCGGCATTGCTCGCTCAACTGGCGGGAAGTTGTGCAACGCTTCGCGAGGAACTCGTGCGGCGCGGTCGTTGGCACG ACACGCTCGTGATGACGTATTCGGAATTTGGCCGGTCCGCACGCGAGAACGTTGATCGCGGCACTGAGCATGGCGGCGCC GCTGCACACTTCGTGATGGGGGGCGGCGTGCGCGGCGGCGTGTATGGGCAGCCGCCCGATCTGACGAGACTCGATGCCGA TGGCAGGCTGCCCGTCGAAGTCGACTTCAGGCGGCTCTACGCGACGGCGCTCGCGTCATTCTGGAAGCTGGACGCGAACG CGGTGCTGCGCGACGCGGTGCAGCCGCTCCCGCTCATGCGAGTGTGA
Upstream 100 bases:
>100_bases GACACCTGGCTTCCGCGCGCAGGGTTTCGTCATCGAAGCTTGAACGTGGTGGCTGCCTGCCGGCGGCAGCAACAGCCGTG ATCAATCCCGGGAGGCGTAG
Downstream 100 bases:
>100_bases GCTCGCTTTAGTGTTTGCGTGCCGCGCGCCACGCGACCCATAACTTGCGGATCGGCGTGAGCGCGATGCGCTGATGCAGC ACATGGTAGCCGTCGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKRRDFISMAAAAGASLSVSRVFATPQTGGGILPQLHARKTARDAFGKLLILIELKGGNDGLNTVIPFTDSRYYALRTHI AIPRNRGLAIDGRTALHPAMRELLPLWRDGQLAVVQGVGCGRDDASHFRSTEIWHTASRADEYRRDGWLTRVAVQCGAVN GRFAAASFGSDEPGPFAQLAHRCGDEHSWSRVDDPDTLAHVGRPDVGEGAGDRVPGTTLDAAHAGVRLFRDSIAAALRTV DMMQPHMRGAIRVTLDGFDTHRNQLTRHAALLAQLAGSCATLREELVRRGRWHDTLVMTYSEFGRSARENVDRGTEHGGA AAHFVMGGGVRGGVYGQPPDLTRLDADGRLPVEVDFRRLYATALASFWKLDANAVLRDAVQPLPLMRV
Sequences:
>Translated_388_residues MKRRDFISMAAAAGASLSVSRVFATPQTGGGILPQLHARKTARDAFGKLLILIELKGGNDGLNTVIPFTDSRYYALRTHI AIPRNRGLAIDGRTALHPAMRELLPLWRDGQLAVVQGVGCGRDDASHFRSTEIWHTASRADEYRRDGWLTRVAVQCGAVN GRFAAASFGSDEPGPFAQLAHRCGDEHSWSRVDDPDTLAHVGRPDVGEGAGDRVPGTTLDAAHAGVRLFRDSIAAALRTV DMMQPHMRGAIRVTLDGFDTHRNQLTRHAALLAQLAGSCATLREELVRRGRWHDTLVMTYSEFGRSARENVDRGTEHGGA AAHFVMGGGVRGGVYGQPPDLTRLDADGRLPVEVDFRRLYATALASFWKLDANAVLRDAVQPLPLMRV >Mature_388_residues MKRRDFISMAAAAGASLSVSRVFATPQTGGGILPQLHARKTARDAFGKLLILIELKGGNDGLNTVIPFTDSRYYALRTHI AIPRNRGLAIDGRTALHPAMRELLPLWRDGQLAVVQGVGCGRDDASHFRSTEIWHTASRADEYRRDGWLTRVAVQCGAVN GRFAAASFGSDEPGPFAQLAHRCGDEHSWSRVDDPDTLAHVGRPDVGEGAGDRVPGTTLDAAHAGVRLFRDSIAAALRTV DMMQPHMRGAIRVTLDGFDTHRNQLTRHAALLAQLAGSCATLREELVRRGRWHDTLVMTYSEFGRSARENVDRGTEHGGA AAHFVMGGGVRGGVYGQPPDLTRLDADGRLPVEVDFRRLYATALASFWKLDANAVLRDAVQPLPLMRV
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42249; Mature: 42249
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRDFISMAAAAGASLSVSRVFATPQTGGGILPQLHARKTARDAFGKLLILIELKGGND CCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEEEEEECCCC GLNTVIPFTDSRYYALRTHIAIPRNRGLAIDGRTALHPAMRELLPLWRDGQLAVVQGVGC CCCEEEECCCCCEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCC GRDDASHFRSTEIWHTASRADEYRRDGWLTRVAVQCGAVNGRFAAASFGSDEPGPFAQLA CCCCHHHHCCHHHHHHHHHHHHHHHCCHHEEEHHHHCCCCCCEEEECCCCCCCCHHHHHH HRCGDEHSWSRVDDPDTLAHVGRPDVGEGAGDRVPGTTLDAAHAGVRLFRDSIAAALRTV HHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DMMQPHMRGAIRVTLDGFDTHRNQLTRHAALLAQLAGSCATLREELVRRGRWHDTLVMTY HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEH SEFGRSARENVDRGTEHGGAAAHFVMGGGVRGGVYGQPPDLTRLDADGRLPVEVDFRRLY HHHCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEEHHHHHHH ATALASFWKLDANAVLRDAVQPLPLMRV HHHHHHHHHCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRRDFISMAAAAGASLSVSRVFATPQTGGGILPQLHARKTARDAFGKLLILIELKGGND CCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCEEEEEEEEECCCC GLNTVIPFTDSRYYALRTHIAIPRNRGLAIDGRTALHPAMRELLPLWRDGQLAVVQGVGC CCCEEEECCCCCEEEEEEEEECCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCC GRDDASHFRSTEIWHTASRADEYRRDGWLTRVAVQCGAVNGRFAAASFGSDEPGPFAQLA CCCCHHHHCCHHHHHHHHHHHHHHHCCHHEEEHHHHCCCCCCEEEECCCCCCCCHHHHHH HRCGDEHSWSRVDDPDTLAHVGRPDVGEGAGDRVPGTTLDAAHAGVRLFRDSIAAALRTV HHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DMMQPHMRGAIRVTLDGFDTHRNQLTRHAALLAQLAGSCATLREELVRRGRWHDTLVMTY HHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEH SEFGRSARENVDRGTEHGGAAAHFVMGGGVRGGVYGQPPDLTRLDADGRLPVEVDFRRLY HHHCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEEHHHHHHH ATALASFWKLDANAVLRDAVQPLPLMRV HHHHHHHHHCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA