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The map label for this gene is 186475745

Identifier: 186475745

GI number: 186475745

Start: 1095703

End: 1096677

Strand: Direct

Name: 186475745

Synonym: Bphy_0980

Alternate gene names: NA

Gene position: 1095703-1096677 (Clockwise)

Preceding gene: 186475744

Following gene: 186475746

Centisome position: 31.49

GC content: 62.97

Gene sequence:

>975_bases
ATGGCTCACATGATCTGGAAAGGCGCGATCAGCTTCGGTCTCGTCCATGTGCCCGTACAACTGTATCCGGCCACGAAGTC
GGAGAAGGTCGGCTTCAATCTGCTCGACAAACGCTCAATCGATCCCATCGGTTATCGGCAGATCAACAAGCGCACGGGTA
AGGAAGTGACGCGCGAGAACATCGTGCGCGGTTTCGAGTATGAGAAGGACAAATACGTCGTGCTGACGGACGAAGAGATT
CGCGCGGCGAACCCGGAGTCGACGCAGACGGTCGACATCATTGCGTTCGTCGAAGCGCCCGAGATACCGTTTCTCTATCT
CGACACGCCGTACTACCTGACGCCTGACCGCAAGGGCGAGAAGGTCTATGCGTTGCTGCGCGACGCGATGAAGGCGACGG
GCAAGATCGGCGTCGCGAATGTCGTGATGCACAACAAGCAGCATCTGGCCGCGCTGATTCCCGTCGGGCCGATGCTCGCG
CTGAACACGCTGCGCTGGGCCGAGGAGGTGCGTCCGTTCGACGAGTTCAAGCTGCCCGACGAAAATGCCAGGAAGTCGGG
CGTGACGGCGCGCGAACTGGACATGGCGAAAAAGCTGATCGACGACATGAGCGGCAAGTGGGATCCCGCCGACTACAAGG
ACACGTTCCGCGACGACATCCTCGCGCTCGTCGACAGGAAGGTGCAGGCGGGCATGACGGAAGAGGTGATGGAGGTCGAA
ACGCCGCGAGAAACGCGGGCTTCGGCGGATATTCTCGACTTGTCCGATCTGCTCAAGCGTAGCCTCGGCCGCGGCGCAAA
AGGCAAGCCCGCAGCGCGCGCTGCAGCGAGCGACGACAGTGAGGAGCAGGACGCCGCGCCCGCGAAACGTCGCGCGGCAG
CGAAGAAAGCCACGCGACGCACGACCGGGACGGCCACGCGCAAGAGCACGTCCGGCGGCGCCTCCCGTACGGCTCGCAAG
CGGCGCGCGGCCTGA

Upstream 100 bases:

>100_bases
ACACCGCATGCGCGACGTGCGTGGCGACGCGCCACGACGCTTGGGCACGCTTGGTGCTTCGCATGGAAATCAATCTAGAG
ATCAACTTCGGGAGCGCGCG

Downstream 100 bases:

>100_bases
ACACGGTGCGCGCCGCTGACCGGGCGGGCAACGGCAAGTGCCACGCAACAGGAAAGCGCATTCGATCATGACCGACAAGC
TCGAGACCTATCATCGCAAG

Product: Ku protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MAHMIWKGAISFGLVHVPVQLYPATKSEKVGFNLLDKRSIDPIGYRQINKRTGKEVTRENIVRGFEYEKDKYVVLTDEEI
RAANPESTQTVDIIAFVEAPEIPFLYLDTPYYLTPDRKGEKVYALLRDAMKATGKIGVANVVMHNKQHLAALIPVGPMLA
LNTLRWAEEVRPFDEFKLPDENARKSGVTARELDMAKKLIDDMSGKWDPADYKDTFRDDILALVDRKVQAGMTEEVMEVE
TPRETRASADILDLSDLLKRSLGRGAKGKPAARAAASDDSEEQDAAPAKRRAAAKKATRRTTGTATRKSTSGGASRTARK
RRAA

Sequences:

>Translated_324_residues
MAHMIWKGAISFGLVHVPVQLYPATKSEKVGFNLLDKRSIDPIGYRQINKRTGKEVTRENIVRGFEYEKDKYVVLTDEEI
RAANPESTQTVDIIAFVEAPEIPFLYLDTPYYLTPDRKGEKVYALLRDAMKATGKIGVANVVMHNKQHLAALIPVGPMLA
LNTLRWAEEVRPFDEFKLPDENARKSGVTARELDMAKKLIDDMSGKWDPADYKDTFRDDILALVDRKVQAGMTEEVMEVE
TPRETRASADILDLSDLLKRSLGRGAKGKPAARAAASDDSEEQDAAPAKRRAAAKKATRRTTGTATRKSTSGGASRTARK
RRAA
>Mature_323_residues
AHMIWKGAISFGLVHVPVQLYPATKSEKVGFNLLDKRSIDPIGYRQINKRTGKEVTRENIVRGFEYEKDKYVVLTDEEIR
AANPESTQTVDIIAFVEAPEIPFLYLDTPYYLTPDRKGEKVYALLRDAMKATGKIGVANVVMHNKQHLAALIPVGPMLAL
NTLRWAEEVRPFDEFKLPDENARKSGVTARELDMAKKLIDDMSGKWDPADYKDTFRDDILALVDRKVQAGMTEEVMEVET
PRETRASADILDLSDLLKRSLGRGAKGKPAARAAASDDSEEQDAAPAKRRAAAKKATRRTTGTATRKSTSGGASRTARKR
RAA

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 36047; Mature: 35915

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHMIWKGAISFGLVHVPVQLYPATKSEKVGFNLLDKRSIDPIGYRQINKRTGKEVTREN
CCCEEEHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IVRGFEYEKDKYVVLTDEEIRAANPESTQTVDIIAFVEAPEIPFLYLDTPYYLTPDRKGE
HHHCCCCCCCCEEEEECCHHHCCCCCCCCEEEEEEEEECCCCCEEEECCCEEECCCCCCH
KVYALLRDAMKATGKIGVANVVMHNKQHLAALIPVGPMLALNTLRWAEEVRPFDEFKLPD
HHHHHHHHHHHHHCCCCHHHHHHCCHHHHEEECCCCHHHHHHHHHHHHHCCCHHHCCCCC
ENARKSGVTARELDMAKKLIDDMSGKWDPADYKDTFRDDILALVDRKVQAGMTEEVMEVE
CCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
TPRETRASADILDLSDLLKRSLGRGAKGKPAARAAASDDSEEQDAAPAKRRAAAKKATRR
CCHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHCCHHHHHHHHHHHHHH
TTGTATRKSTSGGASRTARKRRAA
CCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AHMIWKGAISFGLVHVPVQLYPATKSEKVGFNLLDKRSIDPIGYRQINKRTGKEVTREN
CCEEEHHHHHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IVRGFEYEKDKYVVLTDEEIRAANPESTQTVDIIAFVEAPEIPFLYLDTPYYLTPDRKGE
HHHCCCCCCCCEEEEECCHHHCCCCCCCCEEEEEEEEECCCCCEEEECCCEEECCCCCCH
KVYALLRDAMKATGKIGVANVVMHNKQHLAALIPVGPMLALNTLRWAEEVRPFDEFKLPD
HHHHHHHHHHHHHCCCCHHHHHHCCHHHHEEECCCCHHHHHHHHHHHHHCCCHHHCCCCC
ENARKSGVTARELDMAKKLIDDMSGKWDPADYKDTFRDDILALVDRKVQAGMTEEVMEVE
CCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
TPRETRASADILDLSDLLKRSLGRGAKGKPAARAAASDDSEEQDAAPAKRRAAAKKATRR
CCHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHCCHHHHHHHHHHHHHH
TTGTATRKSTSGGASRTARKRRAA
CCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]