| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is gltI [H]
Identifier: 186475671
GI number: 186475671
Start: 1008771
End: 1009685
Strand: Reverse
Name: gltI [H]
Synonym: Bphy_0906
Alternate gene names: 186475671
Gene position: 1009685-1008771 (Counterclockwise)
Preceding gene: 186475672
Following gene: 186475668
Centisome position: 29.02
GC content: 62.19
Gene sequence:
>915_bases ATGAAGGTTGCAATCAAACACAAGCTGATGGCGATGGCGACCATCGTGGCCGCGGCGCTTGCGTCGCGCGCGCCCGCCGC ACACGCTGACGAACTGACGGGCACCCTCAAGAAGATTCACGACGACGGCGTGATCACGCTGGGCGTACGCGAAGCATCGA TTCCCTTCTCCTACTTCAACGGCGACCGTACGATCGGCTATTCGCAGTCGATCGCACTCGCCATCGTCGACGACATCAAG AAGACGCTCGCGATGCCCGATCTACGGGTGCGCGAAGTGCCCATCACGTCGGCGAACCGCTTCATGATGCTGGCCAACAA CCAGATCGACCTCGAATGCGGTTCGACCACGCACACGCGCGAACGCGAAAGCGTGGCGGCGTTTTCGAACAGCTTCTTCC AGTACGCGGTGCGGATGATCGCGCGCAAGAACGCCGGCATCACGGACTTTCCTGACCTCGCCGGCAAGCCCGTCGTCACG ACGGCGGGCACGTCGGACGAACGCCTCGTGCGCCAGTTGAACAGCGAGAAGCAGTTGAACATGCGAATCGCGAGCGCCAA GGATCATGCCGACGCGTTCGCGGCAGTGAAGGCAGACCGCGCGGTGGCGTTCGTGATGGATGAGCCGATTCTGTACGGCT TTCGCGCAACCGATCCGCGCCCGGACGACTTCATCGTGACGGGCACGCCGCTTGGCTACGAAACCTATGCGTGCATGTTC CGCAAGGGCGACGCGCCGTTCCGCGAGTTGGTGAACCGCGTCATTTCGAAGATGCAGACGTCGGGCGAGGCCGAGCGGCT CTACAACATCTGGTTCACGCAACCGATTCCGCCGCACGGGATCAACCTGAACTACCCGTTGTCGTCGGAGATGCGCACGT TGTTCGCGCATCCGAACGACAAGGCGCTCGACTGA
Upstream 100 bases:
>100_bases GGCGTTTCCAGCGCGCATGCTCGCGTGGCACACGATGGACATCGCCTGCCAGAGCATGACGATGCAGCCGGAGTGATTGC TGCCGGCTCCAGGGGGAACA
Downstream 100 bases:
>100_bases CGCCTCGGCCCGCCGCCGGGCGTGACTACGCTGGATCCAGCAGCCGGTGCAACTCAGCGAGCGATAGTGTCGTCTGAAAG AGCCGCGCGAGACTGCGGCT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKVAIKHKLMAMATIVAAALASRAPAAHADELTGTLKKIHDDGVITLGVREASIPFSYFNGDRTIGYSQSIALAIVDDIK KTLAMPDLRVREVPITSANRFMMLANNQIDLECGSTTHTRERESVAAFSNSFFQYAVRMIARKNAGITDFPDLAGKPVVT TAGTSDERLVRQLNSEKQLNMRIASAKDHADAFAAVKADRAVAFVMDEPILYGFRATDPRPDDFIVTGTPLGYETYACMF RKGDAPFRELVNRVISKMQTSGEAERLYNIWFTQPIPPHGINLNYPLSSEMRTLFAHPNDKALD
Sequences:
>Translated_304_residues MKVAIKHKLMAMATIVAAALASRAPAAHADELTGTLKKIHDDGVITLGVREASIPFSYFNGDRTIGYSQSIALAIVDDIK KTLAMPDLRVREVPITSANRFMMLANNQIDLECGSTTHTRERESVAAFSNSFFQYAVRMIARKNAGITDFPDLAGKPVVT TAGTSDERLVRQLNSEKQLNMRIASAKDHADAFAAVKADRAVAFVMDEPILYGFRATDPRPDDFIVTGTPLGYETYACMF RKGDAPFRELVNRVISKMQTSGEAERLYNIWFTQPIPPHGINLNYPLSSEMRTLFAHPNDKALD >Mature_304_residues MKVAIKHKLMAMATIVAAALASRAPAAHADELTGTLKKIHDDGVITLGVREASIPFSYFNGDRTIGYSQSIALAIVDDIK KTLAMPDLRVREVPITSANRFMMLANNQIDLECGSTTHTRERESVAAFSNSFFQYAVRMIARKNAGITDFPDLAGKPVVT TAGTSDERLVRQLNSEKQLNMRIASAKDHADAFAAVKADRAVAFVMDEPILYGFRATDPRPDDFIVTGTPLGYETYACMF RKGDAPFRELVNRVISKMQTSGEAERLYNIWFTQPIPPHGINLNYPLSSEMRTLFAHPNDKALD
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=271, Percent_Identity=48.7084870848708, Blast_Score=288, Evalue=3e-79, Organism=Escherichia coli, GI1787031, Length=237, Percent_Identity=24.4725738396624, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 33588; Mature: 33588
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAIKHKLMAMATIVAAALASRAPAAHADELTGTLKKIHDDGVITLGVREASIPFSYFN CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEC GDRTIGYSQSIALAIVDDIKKTLAMPDLRVREVPITSANRFMMLANNQIDLECGSTTHTR CCCEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCEEEEEECCCCCCH ERESVAAFSNSFFQYAVRMIARKNAGITDFPDLAGKPVVTTAGTSDERLVRQLNSEKQLN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCHHEE MRIASAKDHADAFAAVKADRAVAFVMDEPILYGFRATDPRPDDFIVTGTPLGYETYACMF EEEECCCCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCHHHEEEEE RKGDAPFRELVNRVISKMQTSGEAERLYNIWFTQPIPPHGINLNYPLSSEMRTLFAHPND ECCCCHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCEECCCCCHHHHHEEECCCC KALD CCCC >Mature Secondary Structure MKVAIKHKLMAMATIVAAALASRAPAAHADELTGTLKKIHDDGVITLGVREASIPFSYFN CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEC GDRTIGYSQSIALAIVDDIKKTLAMPDLRVREVPITSANRFMMLANNQIDLECGSTTHTR CCCEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCEEEEEECCCCCCH ERESVAAFSNSFFQYAVRMIARKNAGITDFPDLAGKPVVTTAGTSDERLVRQLNSEKQLN HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCHHEE MRIASAKDHADAFAAVKADRAVAFVMDEPILYGFRATDPRPDDFIVTGTPLGYETYACMF EEEECCCCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCHHHEEEEE RKGDAPFRELVNRVISKMQTSGEAERLYNIWFTQPIPPHGINLNYPLSSEMRTLFAHPND ECCCCHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCEECCCCCHHHHHEEECCCC KALD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]