| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186475662
Identifier: 186475662
GI number: 186475662
Start: 1002251
End: 1002604
Strand: Reverse
Name: 186475662
Synonym: Bphy_0897
Alternate gene names: NA
Gene position: 1002604-1002251 (Counterclockwise)
Preceding gene: 186475663
Following gene: 186475661
Centisome position: 28.82
GC content: 64.69
Gene sequence:
>354_bases ATGGTTTATAGTTACGCCCCGTCACGTGCTGCCGCTCACATCGTCATGACTTCCTCCGACACCCCACAAAGCCCCCTCTA TCAGAAGCTGCTCGGCGAAACCGCGAAGATCGGCTGGGTTGAACTCGAACGCTTCTTCGCCCGCGGCATGCTGCTGCGCG TCGCGCGCGACCTCGATCTGGTGAGCGTTGCCGAGGCGATCGCCAGCGACGACACGGCGCAAGTCACGCAATGGCTGTCG GCGGGACTCGTCGAGCGCGTGCAGTCTGAGACGGCAACGGACTTCGCTGCGCGCGATCCCGACCTGTGGGCCGTCGTGGT ATCGCCGTGGGTCTGCGTGCAGGAGCGCGGTTGA
Upstream 100 bases:
>100_bases CATGATTTTTCATCCGCAAACGTGTGGCATTCAACGAGCGGATTGGCGTCATCATGAACAGTCGATCCGCGATCCCGCAG CCGACGTCTCGCCGTCGGCT
Downstream 100 bases:
>100_bases ACGATCGCGCCGACCATGCTGCGCCGCCGGATGCCGCGCCCCATGCGGACGCCGCGCCGACGTACTGGCACCGGCGCGTG CTCACGCTCGCGTTTCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MVYSYAPSRAAAHIVMTSSDTPQSPLYQKLLGETAKIGWVELERFFARGMLLRVARDLDLVSVAEAIASDDTAQVTQWLS AGLVERVQSETATDFAARDPDLWAVVVSPWVCVQERG
Sequences:
>Translated_117_residues MVYSYAPSRAAAHIVMTSSDTPQSPLYQKLLGETAKIGWVELERFFARGMLLRVARDLDLVSVAEAIASDDTAQVTQWLS AGLVERVQSETATDFAARDPDLWAVVVSPWVCVQERG >Mature_117_residues MVYSYAPSRAAAHIVMTSSDTPQSPLYQKLLGETAKIGWVELERFFARGMLLRVARDLDLVSVAEAIASDDTAQVTQWLS AGLVERVQSETATDFAARDPDLWAVVVSPWVCVQERG
Specific function: Unknown
COG id: COG5626
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12886; Mature: 12886
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYSYAPSRAAAHIVMTSSDTPQSPLYQKLLGETAKIGWVELERFFARGMLLRVARDLDL CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCHH VSVAEAIASDDTAQVTQWLSAGLVERVQSETATDFAARDPDLWAVVVSPWVCVQERG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCC >Mature Secondary Structure MVYSYAPSRAAAHIVMTSSDTPQSPLYQKLLGETAKIGWVELERFFARGMLLRVARDLDL CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCHH VSVAEAIASDDTAQVTQWLSAGLVERVQSETATDFAARDPDLWAVVVSPWVCVQERG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA