| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is phoU [H]
Identifier: 186475651
GI number: 186475651
Start: 990587
End: 991291
Strand: Direct
Name: phoU [H]
Synonym: Bphy_0886
Alternate gene names: 186475651
Gene position: 990587-991291 (Clockwise)
Preceding gene: 186475650
Following gene: 186475652
Centisome position: 28.47
GC content: 61.99
Gene sequence:
>705_bases ATGTCCGATAAACACCTGTCCAGCCAGTTCGACGCCGACCTGAACCTGGTGTCATCGAAGGTGCTCGAAATGGGCGGCCT TGTCGAGGCACAGATCGTCGCCGCGATGAATGCGCTGAACGAGTTCGACATCGGCATCGCCGACCAGGTGATCGCCACCG AAGACCGTCTGAACCAGATGGAAATCGAGATCGACGAGGAGTGCAGCAACATCATCGCGCGTCGTCAGCCGACGGCGCGC GACCTGCGCCTCGTGATGGCGATCTCGAAGACGATCACGAATCTCGAACGCGCCGGCGACGAAGCCGAGAAGATCGCCAA GCGCACCAAGCGTCTGTCGGAAGATGGTGCGTCGCGCACGATCAACATCGCCGAAATCAAGCTGTCGGGCGATATGGCCG TGAGCATCCTGCGCCGTGCGCTCGACGCGTTCGCGCGCCTCGATACCGTGGCCGCCGCGCAGATCGTGCGCGACGACAAG GCGATCGACGAGGAATTCCGCGCGTTCGTGCGCAAGCTGATTTCGTACATGACGGAAGATCCGCGCCTGATCTCCGTGGG ACTGGACTTCCTCTTCATCGCCAAGGCGATCGAGCGGATCGGCGATCACGCGAAGAACATCGCCGAGTTCATCATCTACG TGGTGAAGGGCACGGACGTGCGCCACATGGGTCGCGACGCGCTCGAGCGCGAAGCGCTCAGCTGA
Upstream 100 bases:
>100_bases GAAAAAATCTTCATCAAGCCGGTCCGCAAGGAAACGGAAGACTACATCACGGGCCGCTTCGGTTAAGCACTGAGCGTACG CACGAGCTTAGGAGTAACAC
Downstream 100 bases:
>100_bases TCCGTCTGACGTTCAGCGATTCCGCACAGCAAAACCGTATATACCGTTTATCAAGAGGCGCCGATGCCCAGCAGTATTCT CGTTATCGAAGATGAACCCG
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSDKHLSSQFDADLNLVSSKVLEMGGLVEAQIVAAMNALNEFDIGIADQVIATEDRLNQMEIEIDEECSNIIARRQPTAR DLRLVMAISKTITNLERAGDEAEKIAKRTKRLSEDGASRTINIAEIKLSGDMAVSILRRALDAFARLDTVAAAQIVRDDK AIDEEFRAFVRKLISYMTEDPRLISVGLDFLFIAKAIERIGDHAKNIAEFIIYVVKGTDVRHMGRDALEREALS
Sequences:
>Translated_234_residues MSDKHLSSQFDADLNLVSSKVLEMGGLVEAQIVAAMNALNEFDIGIADQVIATEDRLNQMEIEIDEECSNIIARRQPTAR DLRLVMAISKTITNLERAGDEAEKIAKRTKRLSEDGASRTINIAEIKLSGDMAVSILRRALDAFARLDTVAAAQIVRDDK AIDEEFRAFVRKLISYMTEDPRLISVGLDFLFIAKAIERIGDHAKNIAEFIIYVVKGTDVRHMGRDALEREALS >Mature_233_residues SDKHLSSQFDADLNLVSSKVLEMGGLVEAQIVAAMNALNEFDIGIADQVIATEDRLNQMEIEIDEECSNIIARRQPTARD LRLVMAISKTITNLERAGDEAEKIAKRTKRLSEDGASRTINIAEIKLSGDMAVSILRRALDAFARLDTVAAAQIVRDDKA IDEEFRAFVRKLISYMTEDPRLISVGLDFLFIAKAIERIGDHAKNIAEFIIYVVKGTDVRHMGRDALEREALS
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=229, Percent_Identity=45.8515283842795, Blast_Score=204, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26048; Mature: 25917
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKHLSSQFDADLNLVSSKVLEMGGLVEAQIVAAMNALNEFDIGIADQVIATEDRLNQM CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EIEIDEECSNIIARRQPTARDLRLVMAISKTITNLERAGDEAEKIAKRTKRLSEDGASRT HEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCE INIAEIKLSGDMAVSILRRALDAFARLDTVAAAQIVRDDKAIDEEFRAFVRKLISYMTED EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRLISVGLDFLFIAKAIERIGDHAKNIAEFIIYVVKGTDVRHMGRDALEREALS CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SDKHLSSQFDADLNLVSSKVLEMGGLVEAQIVAAMNALNEFDIGIADQVIATEDRLNQM CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EIEIDEECSNIIARRQPTARDLRLVMAISKTITNLERAGDEAEKIAKRTKRLSEDGASRT HEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCE INIAEIKLSGDMAVSILRRALDAFARLDTVAAAQIVRDDKAIDEEFRAFVRKLISYMTED EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRLISVGLDFLFIAKAIERIGDHAKNIAEFIIYVVKGTDVRHMGRDALEREALS CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10383982 [H]