| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475628
Identifier: 186475628
GI number: 186475628
Start: 963631
End: 964089
Strand: Direct
Name: 186475628
Synonym: Bphy_0863
Alternate gene names: NA
Gene position: 963631-964089 (Clockwise)
Preceding gene: 186475627
Following gene: 186475635
Centisome position: 27.7
GC content: 64.27
Gene sequence:
>459_bases ATGCTGATTCGCTGGTTGCTGGCTGCTGTTCATCTGCTCGGTTACGGGTTCGCACTGGCGGCGATTATCGGGCGCACGCG CGGGCTGCGGCGGCTAACCGGGCCGGCCGATCTGCCGCGTGTGTTTCTGGCTGACAACGTCTGGGGCATCACGGCCGTCG TCCTGATCGTCACGGGCCTGATGCGCGTGTTCGGTGGCTTCGAGAAGGGGGCGGGCTACTATCTGCACGAGCCGCTCTTT CACATCAAGATGACCGCGCTCGTGCTGATCCTGATTCTCGAAGTCGCGCCGATGGTGTCGCTGATTCGCTGGCGCATCGC CATCAGGAATGGCGATGCGCCGGATCTTTCGCGTGCGGGCCGGTTCGCGCGCATCGGGCACTGGCAGTCGATTCTGCTTG TCGTGATGGTGTTCGCCGCATCGGGAATGGCGCGCGGAATCGGCGCGGCCACGTCGTAA
Upstream 100 bases:
>100_bases CGCAAATCTGCGCCAGGCCTGAGGTTGTGATGGCGCGACACTCGCGCCTGTCCCTCTTCGCTGCCCACCCGCCACGCTCG CATTGCTCACGGAGGAGTCC
Downstream 100 bases:
>100_bases GCGCGGACTGCCGGTTCACGGGCGAGCGCCGCGCGATGTCCATTTCGCTTTCAATGCGGGCTGATGCGGCACCACTGCCA CGCCAGTACACCTTTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MLIRWLLAAVHLLGYGFALAAIIGRTRGLRRLTGPADLPRVFLADNVWGITAVVLIVTGLMRVFGGFEKGAGYYLHEPLF HIKMTALVLILILEVAPMVSLIRWRIAIRNGDAPDLSRAGRFARIGHWQSILLVVMVFAASGMARGIGAATS
Sequences:
>Translated_152_residues MLIRWLLAAVHLLGYGFALAAIIGRTRGLRRLTGPADLPRVFLADNVWGITAVVLIVTGLMRVFGGFEKGAGYYLHEPLF HIKMTALVLILILEVAPMVSLIRWRIAIRNGDAPDLSRAGRFARIGHWQSILLVVMVFAASGMARGIGAATS >Mature_152_residues MLIRWLLAAVHLLGYGFALAAIIGRTRGLRRLTGPADLPRVFLADNVWGITAVVLIVTGLMRVFGGFEKGAGYYLHEPLF HIKMTALVLILILEVAPMVSLIRWRIAIRNGDAPDLSRAGRFARIGHWQSILLVVMVFAASGMARGIGAATS
Specific function: Unknown
COG id: COG3556
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16547; Mature: 16547
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRWLLAAVHLLGYGFALAAIIGRTRGLRRLTGPADLPRVFLADNVWGITAVVLIVTGL CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHH MRVFGGFEKGAGYYLHEPLFHIKMTALVLILILEVAPMVSLIRWRIAIRNGDAPDLSRAG HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC RFARIGHWQSILLVVMVFAASGMARGIGAATS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLIRWLLAAVHLLGYGFALAAIIGRTRGLRRLTGPADLPRVFLADNVWGITAVVLIVTGL CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHH MRVFGGFEKGAGYYLHEPLFHIKMTALVLILILEVAPMVSLIRWRIAIRNGDAPDLSRAG HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC RFARIGHWQSILLVVMVFAASGMARGIGAATS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA