| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475627
Identifier: 186475627
GI number: 186475627
Start: 962695
End: 963552
Strand: Direct
Name: 186475627
Synonym: Bphy_0862
Alternate gene names: NA
Gene position: 962695-963552 (Clockwise)
Preceding gene: 186475626
Following gene: 186475628
Centisome position: 27.67
GC content: 69.46
Gene sequence:
>858_bases TTGGCGAGAACGAAACAGACGCGTGCGAGCGCGGCGCCCGGCGCCGGCACGTTGTTCGCGCTGCGTGCCATCGGCCTCGT GATCCTGGCTCGCTGGCTGTTCTCGATGGGCGAGATGGAGCCGTTGACGGCGCTGCGGGCGATGGCCTCGTCGCCGTGGG CATGCATCAACCTCGTTTTTCTGTTTCTGCTGATCTTCCTCCCGGGCGCGAAGGCGCGCGCCGAGCGGCCGTTTCATCCG CTTCCCCAGTGGCTGCGCCAGGCGCTGCGTCTGTTTGCTTTCCTGGGTCTGCTGTTCGCGGTCTGGTCGGTCGGGGCGTT CGCGCTGGCGGCCGGCTGGCGGCGCGCCTTCAATGCCGTCGCCGCGACGAACGGCTGGCTGATTGCCGCGCCCGCGCTCT ATGCCACCGTTGTGTGGATCTGCCGTCCGCGCGCGCTGTGGCGCACGAATATCGCTGCGCGCCGCTTTGCGATCGGCCGA TTTGCCATCTCGGTTGATGCCGTCACGCGCACGGCCGTTGTCTGGGCCGAGAGCCGCAAGCTTGGTCAGTACGATGCGCG CGAATTGTCGCTGCGCTGGCAGGCCGGGGCGCAGCGTGCGCTACACATGGCGCGCGCCGCCCATGCGGTCGATCTGTCGG GCGCACAGCACGCCACCGTGCCGCCCATATCGAACGGCCACGCTACGCTGGAACGCGCGGGCGTCGGCGGCTTGCTGCGG CGTCCGGCCGTCGAGTTGATGTGGGACTCGCCTGCCGCCGCCGGCCATAACCGGCAGACGGTGTTCAGGGCGCCGCTTTC GACGGAAGGCGATCGCGTCGCGGCGCGCGCACTCGACGCAAATCTGCGCCAGGCCTGA
Upstream 100 bases:
>100_bases GTCCGTGTTCGAGGCGCGGCAACCATGAGACGAATCCGTAATATCCCTATAATGGCCGTGCCGCAAATCCGGCACAGCCG GTCGACATGAGGAGATTGCT
Downstream 100 bases:
>100_bases GGTTGTGATGGCGCGACACTCGCGCCTGTCCCTCTTCGCTGCCCACCCGCCACGCTCGCATTGCTCACGGAGGAGTCCAT GCTGATTCGCTGGTTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MARTKQTRASAAPGAGTLFALRAIGLVILARWLFSMGEMEPLTALRAMASSPWACINLVFLFLLIFLPGAKARAERPFHP LPQWLRQALRLFAFLGLLFAVWSVGAFALAAGWRRAFNAVAATNGWLIAAPALYATVVWICRPRALWRTNIAARRFAIGR FAISVDAVTRTAVVWAESRKLGQYDARELSLRWQAGAQRALHMARAAHAVDLSGAQHATVPPISNGHATLERAGVGGLLR RPAVELMWDSPAAAGHNRQTVFRAPLSTEGDRVAARALDANLRQA
Sequences:
>Translated_285_residues MARTKQTRASAAPGAGTLFALRAIGLVILARWLFSMGEMEPLTALRAMASSPWACINLVFLFLLIFLPGAKARAERPFHP LPQWLRQALRLFAFLGLLFAVWSVGAFALAAGWRRAFNAVAATNGWLIAAPALYATVVWICRPRALWRTNIAARRFAIGR FAISVDAVTRTAVVWAESRKLGQYDARELSLRWQAGAQRALHMARAAHAVDLSGAQHATVPPISNGHATLERAGVGGLLR RPAVELMWDSPAAAGHNRQTVFRAPLSTEGDRVAARALDANLRQA >Mature_284_residues ARTKQTRASAAPGAGTLFALRAIGLVILARWLFSMGEMEPLTALRAMASSPWACINLVFLFLLIFLPGAKARAERPFHPL PQWLRQALRLFAFLGLLFAVWSVGAFALAAGWRRAFNAVAATNGWLIAAPALYATVVWICRPRALWRTNIAARRFAIGRF AISVDAVTRTAVVWAESRKLGQYDARELSLRWQAGAQRALHMARAAHAVDLSGAQHATVPPISNGHATLERAGVGGLLRR PAVELMWDSPAAAGHNRQTVFRAPLSTEGDRVAARALDANLRQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31017; Mature: 30885
Theoretical pI: Translated: 12.31; Mature: 12.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTKQTRASAAPGAGTLFALRAIGLVILARWLFSMGEMEPLTALRAMASSPWACINLVF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH LFLLIFLPGAKARAERPFHPLPQWLRQALRLFAFLGLLFAVWSVGAFALAAGWRRAFNAV HHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATNGWLIAAPALYATVVWICRPRALWRTNIAARRFAIGRFAISVDAVTRTAVVWAESRK HHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCC LGQYDARELSLRWQAGAQRALHMARAAHAVDLSGAQHATVPPISNGHATLERAGVGGLLR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH RPAVELMWDSPAAAGHNRQTVFRAPLSTEGDRVAARALDANLRQA CCHHHEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure ARTKQTRASAAPGAGTLFALRAIGLVILARWLFSMGEMEPLTALRAMASSPWACINLVF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHH LFLLIFLPGAKARAERPFHPLPQWLRQALRLFAFLGLLFAVWSVGAFALAAGWRRAFNAV HHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATNGWLIAAPALYATVVWICRPRALWRTNIAARRFAIGRFAISVDAVTRTAVVWAESRK HHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCC LGQYDARELSLRWQAGAQRALHMARAAHAVDLSGAQHATVPPISNGHATLERAGVGGLLR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHH RPAVELMWDSPAAAGHNRQTVFRAPLSTEGDRVAARALDANLRQA CCHHHEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA