| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475615
Identifier: 186475615
GI number: 186475615
Start: 948629
End: 949810
Strand: Reverse
Name: 186475615
Synonym: Bphy_0850
Alternate gene names: NA
Gene position: 949810-948629 (Counterclockwise)
Preceding gene: 186475618
Following gene: 186475614
Centisome position: 27.3
GC content: 66.41
Gene sequence:
>1182_bases ATGTCCTCCGCTCCCACCCAAGCGCCCCAGCCGTCGACGATCGCGTGCGACATTTTCTGCGCGGTGATCGACAACTTCGG CGACATCGGCGTCTGCTGGCGGCTCGCGCGGCAACTCGCAGGCGAGCACGGCTGGCAGGTGCGCCTGCTGGTCGACGACC TACATGCCTTTCACAAGCTCAATGCTTCCATTGACGTGAACAGTGCGCGACAGACGGTCGGCGGTATCGTCGTCGAGCAC TGGCACGAGCCTGCGCATGTGGGCGATACGCTGCAGGTGGCCGACGTGGTGATCGAGGCGTTCGCATGCGAGCTGCCGCA CGCGTACATCGAGGCGATGGCGCGGCGCGAGCGGGCGCCCGTCTGGTTCAATCTCGAGTATCTAAGCGGCGAAGACTGGG TCGCGGATTTCCATTTGCGGCCGTCGCCGCATCCGCGTCACGCGCTGATGAAGACGTTCTTCTTCCCCGGACTCGGCAAA GGCACGGGCGGCGTGCTCAAAGAACGCGATCTGGACGCGCGCCGCGCCGCATTCGCAGCATCACCCGACGCGCGCGCCGC ATGGTGGCAGGCGAGAACGGCCGGCACGCCGCCGTCGAGAAATGCGGTCGTCGTCTCGCTGTTCGCGTACGAAAACCCCG CCGTCGACAGCCTGCTCGAACAGTGGCGCGACGCGAAAGGCGAAATCGTGCTGCTCGTGCCCGAAGGCCGCGTGTCGGGC GCGGTTGCGCGCTTTTTCGGCCTGCCCTCGTTTGCAGGCGGCGCGCAGGCAGTGCGCGGCAGCCTGCGCGCCCATGCGCT CGCTTTCACCGACCAACCCGGCTACGACGAACTGCTATGGGCGAGCGACATCAATTTCGTGCGCGGCGAGGATTCGTTCG TACGCGCGCAATGGGCCGCGCGGCCGTTCGTCTGGCAAATCTATCCGCAGGCCGACGACGCCCATCTGCCGAAACTCGAT GCCGCCCTCGCCCACTACGCGCACGGCCTTTCCGCCGACGCGCGCGCTGCCTTGGGCCGCTTCTGGCACGCGTGGAACGG CAAGGGCACACCCGACTGGGAAGATCTGTGGCGCCATCGCGCGCGCCTCGACGCGCGCGCAGCCGCGTGGGCGCACGAAC TGGCGTCAATCGGCGATCTCACCGGAAATCTCGCCGAATTCGCAAAAAGTCAGTTAAAATAA
Upstream 100 bases:
>100_bases GCTTGCACGCCGTGTAATGACGGCGCGTCATGTGGGTGATGTGCTTTAGAATCGCCAGTTTAGAACATTCCGCCCGGGCC CGAAGCCAGGCGCCGCGATC
Downstream 100 bases:
>100_bases GCGGTTATCCAACGGCCGACGACGCAAGCGCGGCACGACGGCGCGGCCGGCGGCGGATTCTCAGTCCGCCTCCACGGTCA TGTCCAGTCAGTGTCACACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSSAPTQAPQPSTIACDIFCAVIDNFGDIGVCWRLARQLAGEHGWQVRLLVDDLHAFHKLNASIDVNSARQTVGGIVVEH WHEPAHVGDTLQVADVVIEAFACELPHAYIEAMARRERAPVWFNLEYLSGEDWVADFHLRPSPHPRHALMKTFFFPGLGK GTGGVLKERDLDARRAAFAASPDARAAWWQARTAGTPPSRNAVVVSLFAYENPAVDSLLEQWRDAKGEIVLLVPEGRVSG AVARFFGLPSFAGGAQAVRGSLRAHALAFTDQPGYDELLWASDINFVRGEDSFVRAQWAARPFVWQIYPQADDAHLPKLD AALAHYAHGLSADARAALGRFWHAWNGKGTPDWEDLWRHRARLDARAAAWAHELASIGDLTGNLAEFAKSQLK
Sequences:
>Translated_393_residues MSSAPTQAPQPSTIACDIFCAVIDNFGDIGVCWRLARQLAGEHGWQVRLLVDDLHAFHKLNASIDVNSARQTVGGIVVEH WHEPAHVGDTLQVADVVIEAFACELPHAYIEAMARRERAPVWFNLEYLSGEDWVADFHLRPSPHPRHALMKTFFFPGLGK GTGGVLKERDLDARRAAFAASPDARAAWWQARTAGTPPSRNAVVVSLFAYENPAVDSLLEQWRDAKGEIVLLVPEGRVSG AVARFFGLPSFAGGAQAVRGSLRAHALAFTDQPGYDELLWASDINFVRGEDSFVRAQWAARPFVWQIYPQADDAHLPKLD AALAHYAHGLSADARAALGRFWHAWNGKGTPDWEDLWRHRARLDARAAAWAHELASIGDLTGNLAEFAKSQLK >Mature_392_residues SSAPTQAPQPSTIACDIFCAVIDNFGDIGVCWRLARQLAGEHGWQVRLLVDDLHAFHKLNASIDVNSARQTVGGIVVEHW HEPAHVGDTLQVADVVIEAFACELPHAYIEAMARRERAPVWFNLEYLSGEDWVADFHLRPSPHPRHALMKTFFFPGLGKG TGGVLKERDLDARRAAFAASPDARAAWWQARTAGTPPSRNAVVVSLFAYENPAVDSLLEQWRDAKGEIVLLVPEGRVSGA VARFFGLPSFAGGAQAVRGSLRAHALAFTDQPGYDELLWASDINFVRGEDSFVRAQWAARPFVWQIYPQADDAHLPKLDA ALAHYAHGLSADARAALGRFWHAWNGKGTPDWEDLWRHRARLDARAAAWAHELASIGDLTGNLAEFAKSQLK
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43311; Mature: 43180
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAPTQAPQPSTIACDIFCAVIDNFGDIGVCWRLARQLAGEHGWQVRLLVDDLHAFHKL CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHC NASIDVNSARQTVGGIVVEHWHEPAHVGDTLQVADVVIEAFACELPHAYIEAMARRERAP CCCEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC VWFNLEYLSGEDWVADFHLRPSPHPRHALMKTFFFPGLGKGTGGVLKERDLDARRAAFAA EEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCC SPDARAAWWQARTAGTPPSRNAVVVSLFAYENPAVDSLLEQWRDAKGEIVLLVPEGRVSG CCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHH AVARFFGLPSFAGGAQAVRGSLRAHALAFTDQPGYDELLWASDINFVRGEDSFVRAQWAA HHHHHHCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEECCCCCEECCCCHHHHHHHCC RPFVWQIYPQADDAHLPKLDAALAHYAHGLSADARAALGRFWHAWNGKGTPDWEDLWRHR CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ARLDARAAAWAHELASIGDLTGNLAEFAKSQLK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SSAPTQAPQPSTIACDIFCAVIDNFGDIGVCWRLARQLAGEHGWQVRLLVDDLHAFHKL CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHC NASIDVNSARQTVGGIVVEHWHEPAHVGDTLQVADVVIEAFACELPHAYIEAMARRERAP CCCEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC VWFNLEYLSGEDWVADFHLRPSPHPRHALMKTFFFPGLGKGTGGVLKERDLDARRAAFAA EEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCC SPDARAAWWQARTAGTPPSRNAVVVSLFAYENPAVDSLLEQWRDAKGEIVLLVPEGRVSG CCCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCHHH AVARFFGLPSFAGGAQAVRGSLRAHALAFTDQPGYDELLWASDINFVRGEDSFVRAQWAA HHHHHHCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEECCCCCEECCCCHHHHHHHCC RPFVWQIYPQADDAHLPKLDAALAHYAHGLSADARAALGRFWHAWNGKGTPDWEDLWRHR CCEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ARLDARAAAWAHELASIGDLTGNLAEFAKSQLK HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA