| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is fabH
Identifier: 186475593
GI number: 186475593
Start: 927426
End: 928415
Strand: Direct
Name: fabH
Synonym: Bphy_0828
Alternate gene names: 186475593
Gene position: 927426-928415 (Clockwise)
Preceding gene: 186475592
Following gene: 186475594
Centisome position: 26.66
GC content: 63.33
Gene sequence:
>990_bases ATGGCTCAATCCACTACCTATTCCCGCGTGCTGGGCACGGGCAGCTATCTGCCGCCCAACCGCGTTTCCAATCAGGATCT GGCCGCTCGTCTCGCGAAGCAGGGAATCGAGACGAGCGACGAATGGATCGTGGCCCGCACGGGCATCCACGCGCGCCACT TCGCCGAACCTGACGTCACGACCAGCGACCTCGCACTGATCGCGTCGCAACGGGCGATCGAAGCCGCCGATGTCGATCCG CAGGCCATCGATCTGATCATCGTCGCCACGTCGACGCCGGACTTCGTGTTTCCGAGCACAGCCTGCCTGCTGCAGAACAA GCTGGGCATCAAGAACAACGGCGCCGCGTTCGACGTGCAGGCCGTGTGCTCAGGTTTTGCCTATGCCGTTGCGACGGCTG ACAGCTTCATTCGAAGCGGGCAACATCGTACTGCGTTGGTGGTCGGGGCTGAAACGTTCTCGCGCATTCTCGATTTCAAC GACCGCACCACGTGCGTGCTGTTTGGCGATGGCGCGGGCGCCGTCGTCCTGCAGGCATCGGACGAGCCGGGCGTACTGGC AAGCGCGTTGCACGCGGACGGCAGTCATTCGAACATTCTCTGCACGCCGGGCAACGTGAACGGCGGCATCGTGCAAGGCA GTGCGTTCCTGCACATGGACGGGCAGGCGGTGTTCAAGTTGGCTGTCAACGTGCTGGAAAAAGTCGCGGTCGAGGCGCTG CAGAAAGCCGATCTTCAACCCGAACAGATCGACTGGCTGATTCCGCACCAGGCCAACATCCGCATCATGCAGAGCACGTG CCGCAAGCTCGGCCTGCCGCAGGAGCGGATGGTCGTCACAGTGCACGAGCACGGCAACACGTCGGCGGCGTCGATTCCGC TCGCGCTCGATGTCGCGGTCCGCGACGGACGCATCCAGCGGGGCCATAACGTGCTGATCGAAGGCGTCGGCGGCGGCTTT ACATGGGGCGCATCGGTCATCCGTTACTGA
Upstream 100 bases:
>100_bases CAGGCGGGCCGGGTTCCGCGAGCCAGATGGCTAGCCCGATCGCAGGTCCGGTTTCTGGCCAGCCGGCCGAGCCCTACAGC GCACAATCCTCGAAGGCATA
Downstream 100 bases:
>100_bases TGGCCGCGCGCAGCGGCGCCAGACGCCGCTTCAAGCCGTAGCGCACGCCATGCGTGCATCACGCACATTTGAACTCATCG AATTGGGGACGATATGAAAT
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAQSTTYSRVLGTGSYLPPNRVSNQDLAARLAKQGIETSDEWIVARTGIHARHFAEPDVTTSDLALIASQRAIEAADVDP QAIDLIIVATSTPDFVFPSTACLLQNKLGIKNNGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVVGAETFSRILDFN DRTTCVLFGDGAGAVVLQASDEPGVLASALHADGSHSNILCTPGNVNGGIVQGSAFLHMDGQAVFKLAVNVLEKVAVEAL QKADLQPEQIDWLIPHQANIRIMQSTCRKLGLPQERMVVTVHEHGNTSAASIPLALDVAVRDGRIQRGHNVLIEGVGGGF TWGASVIRY
Sequences:
>Translated_329_residues MAQSTTYSRVLGTGSYLPPNRVSNQDLAARLAKQGIETSDEWIVARTGIHARHFAEPDVTTSDLALIASQRAIEAADVDP QAIDLIIVATSTPDFVFPSTACLLQNKLGIKNNGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVVGAETFSRILDFN DRTTCVLFGDGAGAVVLQASDEPGVLASALHADGSHSNILCTPGNVNGGIVQGSAFLHMDGQAVFKLAVNVLEKVAVEAL QKADLQPEQIDWLIPHQANIRIMQSTCRKLGLPQERMVVTVHEHGNTSAASIPLALDVAVRDGRIQRGHNVLIEGVGGGF TWGASVIRY >Mature_328_residues AQSTTYSRVLGTGSYLPPNRVSNQDLAARLAKQGIETSDEWIVARTGIHARHFAEPDVTTSDLALIASQRAIEAADVDPQ AIDLIIVATSTPDFVFPSTACLLQNKLGIKNNGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVVGAETFSRILDFND RTTCVLFGDGAGAVVLQASDEPGVLASALHADGSHSNILCTPGNVNGGIVQGSAFLHMDGQAVFKLAVNVLEKVAVEALQ KADLQPEQIDWLIPHQANIRIMQSTCRKLGLPQERMVVTVHEHGNTSAASIPLALDVAVRDGRIQRGHNVLIEGVGGGFT WGASVIRY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family
Homologues:
Organism=Escherichia coli, GI1787333, Length=323, Percent_Identity=49.2260061919505, Blast_Score=319, Evalue=2e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABH_BURP8 (B2JFI9)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001857063.1 - ProteinModelPortal: B2JFI9 - SMR: B2JFI9 - GeneID: 6242326 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0828 - HOGENOM: HBG649927 - OMA: ATTTPDM - ProtClustDB: PRK09352 - GO: GO:0005737 - HAMAP: MF_01815 - InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 - Gene3D: G3DSA:3.40.47.10 - TIGRFAMs: TIGR00747
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C; SSF53901 Thiolase-like
EC number: =2.3.1.180
Molecular weight: Translated: 34905; Mature: 34774
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: ACT_SITE 123-123 ACT_SITE 256-256 ACT_SITE 286-286
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSTTYSRVLGTGSYLPPNRVSNQDLAARLAKQGIETSDEWIVARTGIHARHFAEPDVT CCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCCC TSDLALIASQRAIEAADVDPQAIDLIIVATSTPDFVFPSTACLLQNKLGIKNNGAAFDVQ HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEHH AVCSGFAYAVATADSFIRSGQHRTALVVGAETFSRILDFNDRTTCVLFGDGAGAVVLQAS HHHCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCEEEEEEECCCCEEEEEEC DEPGVLASALHADGSHSNILCTPGNVNGGIVQGSAFLHMDGQAVFKLAVNVLEKVAVEAL CCCCHHHHHHHCCCCCCEEEEECCCCCCCEEECEEEEEECCHHHHHHHHHHHHHHHHHHH QKADLQPEQIDWLIPHQANIRIMQSTCRKLGLPQERMVVTVHEHGNTSAASIPLALDVAV HHCCCCHHHEEEECCCCCCEEEHHHHHHHHCCCCHHEEEEEEECCCCCCEECEEEEEEEE RDGRIQRGHNVLIEGVGGGFTWGASVIRY ECCCEECCCEEEEEECCCCCHHHHHHHCC >Mature Secondary Structure AQSTTYSRVLGTGSYLPPNRVSNQDLAARLAKQGIETSDEWIVARTGIHARHFAEPDVT CCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHCCCCCCC TSDLALIASQRAIEAADVDPQAIDLIIVATSTPDFVFPSTACLLQNKLGIKNNGAAFDVQ HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEEHH AVCSGFAYAVATADSFIRSGQHRTALVVGAETFSRILDFNDRTTCVLFGDGAGAVVLQAS HHHCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCCEEEEEEECCCCEEEEEEC DEPGVLASALHADGSHSNILCTPGNVNGGIVQGSAFLHMDGQAVFKLAVNVLEKVAVEAL CCCCHHHHHHHCCCCCCEEEEECCCCCCCEEECEEEEEECCHHHHHHHHHHHHHHHHHHH QKADLQPEQIDWLIPHQANIRIMQSTCRKLGLPQERMVVTVHEHGNTSAASIPLALDVAV HHCCCCHHHEEEECCCCCCEEEHHHHHHHHCCCCHHEEEEEEECCCCCCEECEEEEEEEE RDGRIQRGHNVLIEGVGGGFTWGASVIRY ECCCEECCCEEEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA