| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yncA [C]
Identifier: 186475578
GI number: 186475578
Start: 912275
End: 912763
Strand: Reverse
Name: yncA [C]
Synonym: Bphy_0813
Alternate gene names: 186475578
Gene position: 912763-912275 (Counterclockwise)
Preceding gene: 186475579
Following gene: 186475572
Centisome position: 26.23
GC content: 65.44
Gene sequence:
>489_bases ATGTCCGCGACGATTCGCGCGGCCACGCCGGACGACGTCGGCGCGATGCTCGCGCTGATGTACGAGCTGGCCGAGTTCGA AAAGCTCACGCATCTGTTCGTCGCAACGGAGGCAGACCTGCGTGACGCGCTGTTCGGCGCGCGGCCGTCAGCGGAAGCGA TCGTGGCCGAGCGCGGCGGCAACATGATCGGTTACGCGCTCTTCTTCCATAATTATTCGACCTTTCTCGGACGCCGCGGC CTGTATCTCGAAGACCTGTACGTGCGGCCCACCGAGCGCGGCACGGGGCTCGGTTCGACGATGCTGCGCTACCTGGCGGC GCTGGCCGTCGAACGTCAATGCGGCCGCTTCGAATGGTCTGTACTGGACTGGAACCAGCCCGCGATCGATTTCTATCAGA AGATGGGCGCAACGGTGCTGCCCGATTGGCGCGTCGTGCGCATCACGGGCGACTCGCTCGCCAAGCTGGCGGCCAGCGCG GCGAACTGA
Upstream 100 bases:
>100_bases GCTTCATCTTGCTGTGGATTGCGTGTCACGCCTACAACTGGGTCGCATCGCGCTTCGGCGGCATCGAAATCCAGTTGAGC GACGTGCCGGAGGAAGCGTA
Downstream 100 bases:
>100_bases TGACCGATGACCTGGCTTCGGCCAGAAAAAGGGCGCGTGATCCTCGCGATCACGCGCCCTTTTCACGTCTGGCCTCAGGA CTCGTCGGGATCGACGCCCG
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; N-Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Diamine N-Acetyltransferase; GCN5-Like N-Acetyltransferase; Acetyltransferase Protein; Acetyltransferase Family Protein; Diamine Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase GNAT Family Protein; Histone Acetyltransferase HPA; ACETYLTRANSFERASE GCN5-Related N-Acetyltransferase; Gnat Acetyltransferase; Sortase-Like Acyltransferase; Spermidine/Spermine N1-Acetyl Transferase; Gcn5-Related N-Acetyltransferase; N-Acetyltransferase Protein; GNAT-Family Acetyltransferase; LOW QUALITY PROTEIN Acetyltransferase; Argininosuccinate Synthase
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSATIRAATPDDVGAMLALMYELAEFEKLTHLFVATEADLRDALFGARPSAEAIVAERGGNMIGYALFFHNYSTFLGRRG LYLEDLYVRPTERGTGLGSTMLRYLAALAVERQCGRFEWSVLDWNQPAIDFYQKMGATVLPDWRVVRITGDSLAKLAASA AN
Sequences:
>Translated_162_residues MSATIRAATPDDVGAMLALMYELAEFEKLTHLFVATEADLRDALFGARPSAEAIVAERGGNMIGYALFFHNYSTFLGRRG LYLEDLYVRPTERGTGLGSTMLRYLAALAVERQCGRFEWSVLDWNQPAIDFYQKMGATVLPDWRVVRITGDSLAKLAASA AN >Mature_161_residues SATIRAATPDDVGAMLALMYELAEFEKLTHLFVATEADLRDALFGARPSAEAIVAERGGNMIGYALFFHNYSTFLGRRGL YLEDLYVRPTERGTGLGSTMLRYLAALAVERQCGRFEWSVLDWNQPAIDFYQKMGATVLPDWRVVRITGDSLAKLAASAA N
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19424126, Length=169, Percent_Identity=39.0532544378698, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI4506789, Length=167, Percent_Identity=34.1317365269461, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17559148, Length=156, Percent_Identity=35.8974358974359, Blast_Score=95, Evalue=2e-20, Organism=Drosophila melanogaster, GI24647013, Length=163, Percent_Identity=41.1042944785276, Blast_Score=106, Evalue=7e-24, Organism=Drosophila melanogaster, GI24647015, Length=131, Percent_Identity=42.7480916030534, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 17919; Mature: 17788
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATIRAATPDDVGAMLALMYELAEFEKLTHLFVATEADLRDALFGARPSAEAIVAERGG CCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCC NMIGYALFFHNYSTFLGRRGLYLEDLYVRPTERGTGLGSTMLRYLAALAVERQCGRFEWS CEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE VLDWNQPAIDFYQKMGATVLPDWRVVRITGDSLAKLAASAAN EECCCCHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHHCCC >Mature Secondary Structure SATIRAATPDDVGAMLALMYELAEFEKLTHLFVATEADLRDALFGARPSAEAIVAERGG CCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCC NMIGYALFFHNYSTFLGRRGLYLEDLYVRPTERGTGLGSTMLRYLAALAVERQCGRFEWS CEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE VLDWNQPAIDFYQKMGATVLPDWRVVRITGDSLAKLAASAAN EECCCCHHHHHHHHCCCEECCCCEEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA