| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yjgA [C]
Identifier: 186475545
GI number: 186475545
Start: 874481
End: 875062
Strand: Reverse
Name: yjgA [C]
Synonym: Bphy_0780
Alternate gene names: 186475545
Gene position: 875062-874481 (Counterclockwise)
Preceding gene: 186475547
Following gene: 186475544
Centisome position: 25.15
GC content: 65.98
Gene sequence:
>582_bases ATGGAACCCGCCGCCGTCGTCGACGACAACGGGTATGACCGTCCCAGCAAATCGCAACTGAAGCGCGAAATGCACGCGCT GCAGGCGCTGGGAGAAGAGATCGTCGCGCTGCCAAAAGACGCGCTCAAGCGCATGCCGCTGCCCGAAGCGCTCGACGAAG CCGTGCGCGAAGCGCGCCGCATCACCGATCACGAAGGCAAGCGCCGCCAGATGCAGTACGTCGGCAAGGTCATGCGCGGC CTGACGGACGACGAAACGGCCACGCTGCGCGAAGCGCTCGACAAGTACAAGGGCGTCAACAAGTCGGAGACGGCGCGCCT GCACTGGATCGAACGCACGCGCGAACAGCTGCTCGCCGACGACGCCGCACTGACCGAGTTCATTCGCCAGCACCCCGCCG CCGATCCGCAGGAAGGCCGCACGCTGATTCGCAACGCCCGCAAGGAAGCGCAGCAAGGCAAGGCACCGCGCTACTTCCGC GAGCTGTTCCAGTGGATCAAGAACGCGGGCGGCGCGGGCGGCGACGACGACAGCAACGATTCCGACGAGGCGGACGACCA CGATGACGAATCCCACGCGTAA
Upstream 100 bases:
>100_bases GCGCCCCGCGTCGATGCCTGCGACGACCATACCTCGTCCTGCCGGCGCTGTCCGGCAAGCTACAATATCGCGCATGACAC GCAAAACCCGCATTCAACCC
Downstream 100 bases:
>100_bases TCACCCCGACGAACTGATCGTCGGCCTGGTGTCGATCAGCGACCGTGCGAGCACGGGCATCTATGAAGACAAGGGCATTC CGTCATTGCAGGAATGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARRITDHEGKRRQMQYVGKVMRG LTDDETATLREALDKYKGVNKSETARLHWIERTREQLLADDAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFR ELFQWIKNAGGAGGDDDSNDSDEADDHDDESHA
Sequences:
>Translated_193_residues MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARRITDHEGKRRQMQYVGKVMRG LTDDETATLREALDKYKGVNKSETARLHWIERTREQLLADDAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFR ELFQWIKNAGGAGGDDDSNDSDEADDHDDESHA >Mature_193_residues MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARRITDHEGKRRQMQYVGKVMRG LTDDETATLREALDKYKGVNKSETARLHWIERTREQLLADDAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFR ELFQWIKNAGGAGGDDDSNDSDEADDHDDESHA
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=153, Percent_Identity=40.5228758169935, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 21873; Mature: 21873
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH ITDHEGKRRQMQYVGKVMRGLTDDETATLREALDKYKGVNKSETARLHWIERTREQLLAD HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFRELFQWIKNAGGAGGDDDSND HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SDEADDHDDESHA CCCCCCCCCCCCC >Mature Secondary Structure MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH ITDHEGKRRQMQYVGKVMRGLTDDETATLREALDKYKGVNKSETARLHWIERTREQLLAD HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFRELFQWIKNAGGAGGDDDSND HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SDEADDHDDESHA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA