Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yjgA [C]

Identifier: 186475545

GI number: 186475545

Start: 874481

End: 875062

Strand: Reverse

Name: yjgA [C]

Synonym: Bphy_0780

Alternate gene names: 186475545

Gene position: 875062-874481 (Counterclockwise)

Preceding gene: 186475547

Following gene: 186475544

Centisome position: 25.15

GC content: 65.98

Gene sequence:

>582_bases
ATGGAACCCGCCGCCGTCGTCGACGACAACGGGTATGACCGTCCCAGCAAATCGCAACTGAAGCGCGAAATGCACGCGCT
GCAGGCGCTGGGAGAAGAGATCGTCGCGCTGCCAAAAGACGCGCTCAAGCGCATGCCGCTGCCCGAAGCGCTCGACGAAG
CCGTGCGCGAAGCGCGCCGCATCACCGATCACGAAGGCAAGCGCCGCCAGATGCAGTACGTCGGCAAGGTCATGCGCGGC
CTGACGGACGACGAAACGGCCACGCTGCGCGAAGCGCTCGACAAGTACAAGGGCGTCAACAAGTCGGAGACGGCGCGCCT
GCACTGGATCGAACGCACGCGCGAACAGCTGCTCGCCGACGACGCCGCACTGACCGAGTTCATTCGCCAGCACCCCGCCG
CCGATCCGCAGGAAGGCCGCACGCTGATTCGCAACGCCCGCAAGGAAGCGCAGCAAGGCAAGGCACCGCGCTACTTCCGC
GAGCTGTTCCAGTGGATCAAGAACGCGGGCGGCGCGGGCGGCGACGACGACAGCAACGATTCCGACGAGGCGGACGACCA
CGATGACGAATCCCACGCGTAA

Upstream 100 bases:

>100_bases
GCGCCCCGCGTCGATGCCTGCGACGACCATACCTCGTCCTGCCGGCGCTGTCCGGCAAGCTACAATATCGCGCATGACAC
GCAAAACCCGCATTCAACCC

Downstream 100 bases:

>100_bases
TCACCCCGACGAACTGATCGTCGGCCTGGTGTCGATCAGCGACCGTGCGAGCACGGGCATCTATGAAGACAAGGGCATTC
CGTCATTGCAGGAATGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARRITDHEGKRRQMQYVGKVMRG
LTDDETATLREALDKYKGVNKSETARLHWIERTREQLLADDAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFR
ELFQWIKNAGGAGGDDDSNDSDEADDHDDESHA

Sequences:

>Translated_193_residues
MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARRITDHEGKRRQMQYVGKVMRG
LTDDETATLREALDKYKGVNKSETARLHWIERTREQLLADDAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFR
ELFQWIKNAGGAGGDDDSNDSDEADDHDDESHA
>Mature_193_residues
MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARRITDHEGKRRQMQYVGKVMRG
LTDDETATLREALDKYKGVNKSETARLHWIERTREQLLADDAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFR
ELFQWIKNAGGAGGDDDSNDSDEADDHDDESHA

Specific function: Unknown

COG id: COG3028

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0307 family [H]

Homologues:

Organism=Escherichia coli, GI1790681, Length=153, Percent_Identity=40.5228758169935, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023153
- InterPro:   IPR006839 [H]

Pfam domain/function: PF04751 DUF615 [H]

EC number: NA

Molecular weight: Translated: 21873; Mature: 21873

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH
ITDHEGKRRQMQYVGKVMRGLTDDETATLREALDKYKGVNKSETARLHWIERTREQLLAD
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFRELFQWIKNAGGAGGDDDSND
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SDEADDHDDESHA
CCCCCCCCCCCCC
>Mature Secondary Structure
MEPAAVVDDNGYDRPSKSQLKREMHALQALGEEIVALPKDALKRMPLPEALDEAVREARR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH
ITDHEGKRRQMQYVGKVMRGLTDDETATLREALDKYKGVNKSETARLHWIERTREQLLAD
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DAALTEFIRQHPAADPQEGRTLIRNARKEAQQGKAPRYFRELFQWIKNAGGAGGDDDSND
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
SDEADDHDDESHA
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA