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The map label for this gene is plpC [H]

Identifier: 186475526

GI number: 186475526

Start: 857462

End: 858262

Strand: Direct

Name: plpC [H]

Synonym: Bphy_0761

Alternate gene names: 186475526

Gene position: 857462-858262 (Clockwise)

Preceding gene: 186475525

Following gene: 186475527

Centisome position: 24.65

GC content: 61.92

Gene sequence:

>801_bases
ATGCAACGTCGTTTCATTCTGAAAATCGCGGCCACGCTGGGCGCGGCATCGCTCATCGGCGCATCGTCGCTTGCCTTCGC
CGACGAATCGATCAAGGTCGGCGTGACGGGCGGTCCTCACGCGCAACTGATGGACGTCGTAAAGACAGTCGCGGCGAAGA
ACGGCCTGAACATCAAGATCGTGGAGTTCTCCGACTACGTGCAGCCGAACGCGGCGCTCGCGGGTGGCGACCTCGACGCG
AACAGCTACCAGCACGACCCGTATCTGCAGGCGCAGGTGAAGGACCGCGGCTACAAGGTGATCAGGGTCGCGGATACCGT
GACCTTCCCGATGGGCATCTATTCGAAGAAGGTAAAGTCGCTGGCGGAGCTGCCGAACGGCGCAAAGATTGCCGTGCCGA
ACGATCCGACCAACGGCGGCCGCGCATTGCTGTTGCTGCAAAAGCAGGGCTTGATCAAGCTGCGCGCCGACGCGGGCCTG
AAGGCGACACCGCTCGACATCGCCGAGAACCCGAGGAAGCTGAAGATCGTCGAACTCGACGCGGCGCAAATTCCGCGCTC
GCTCGGCGATGTCGATGCCGCGGCCATCAACACGAACTTCGCGATGGAAGCGGGCCTGAAGCCGAAGCAGGATGCGATCG
CGATCGAAGACCCGAAGGGTCCATATGTGAACATCATTGCGATCCGCGAGGCGGACCGCAATAAGCCGTGGGTGGCGAAG
CTGATCGCGGCTTACCACTCGCCGGAAGTGAAGCAGTTCATCGAAAGCAAGTTTGGCGGCGCCGTCGTCGCAGCGTGGTA
A

Upstream 100 bases:

>100_bases
ATCCTGATCGTCTTCGTGCAACTGGTGCAGTCGTTCGGGGATTGGCTCGTGCGTCGTCTCAGCCACAAATAAACAACTTC
AAGAGAAAAAAGGTTTGGTC

Downstream 100 bases:

>100_bases
TGACAAGTCGAGCCGTGAATGTGGCGAATCTTGCCAGCATCGACGCAACCAGCCCGAATTGGTAGCAACCCGGACTTGGC
CTCCGGGTTTTTTCCGGATT

Product: YaeC family lipoprotein

Products: NA

Alternate protein names: PLP3 [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MQRRFILKIAATLGAASLIGASSLAFADESIKVGVTGGPHAQLMDVVKTVAAKNGLNIKIVEFSDYVQPNAALAGGDLDA
NSYQHDPYLQAQVKDRGYKVIRVADTVTFPMGIYSKKVKSLAELPNGAKIAVPNDPTNGGRALLLLQKQGLIKLRADAGL
KATPLDIAENPRKLKIVELDAAQIPRSLGDVDAAAINTNFAMEAGLKPKQDAIAIEDPKGPYVNIIAIREADRNKPWVAK
LIAAYHSPEVKQFIESKFGGAVVAAW

Sequences:

>Translated_266_residues
MQRRFILKIAATLGAASLIGASSLAFADESIKVGVTGGPHAQLMDVVKTVAAKNGLNIKIVEFSDYVQPNAALAGGDLDA
NSYQHDPYLQAQVKDRGYKVIRVADTVTFPMGIYSKKVKSLAELPNGAKIAVPNDPTNGGRALLLLQKQGLIKLRADAGL
KATPLDIAENPRKLKIVELDAAQIPRSLGDVDAAAINTNFAMEAGLKPKQDAIAIEDPKGPYVNIIAIREADRNKPWVAK
LIAAYHSPEVKQFIESKFGGAVVAAW
>Mature_266_residues
MQRRFILKIAATLGAASLIGASSLAFADESIKVGVTGGPHAQLMDVVKTVAAKNGLNIKIVEFSDYVQPNAALAGGDLDA
NSYQHDPYLQAQVKDRGYKVIRVADTVTFPMGIYSKKVKSLAELPNGAKIAVPNDPTNGGRALLLLQKQGLIKLRADAGL
KATPLDIAENPRKLKIVELDAAQIPRSLGDVDAAAINTNFAMEAGLKPKQDAIAIEDPKGPYVNIIAIREADRNKPWVAK
LIAAYHSPEVKQFIESKFGGAVVAAW

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=261, Percent_Identity=49.0421455938697, Blast_Score=249, Evalue=1e-67,
Organism=Escherichia coli, GI1790093, Length=241, Percent_Identity=46.8879668049792, Blast_Score=221, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28389; Mature: 28389

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRFILKIAATLGAASLIGASSLAFADESIKVGVTGGPHAQLMDVVKTVAAKNGLNIKI
CCCEEEEEEHHHHCHHHHHCCCHHEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
VEFSDYVQPNAALAGGDLDANSYQHDPYLQAQVKDRGYKVIRVADTVTFPMGIYSKKVKS
EEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECHHHHHHHHHH
LAELPNGAKIAVPNDPTNGGRALLLLQKQGLIKLRADAGLKATPLDIAENPRKLKIVELD
HHHCCCCCEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEC
AAQIPRSLGDVDAAAINTNFAMEAGLKPKQDAIAIEDPKGPYVNIIAIREADRNKPWVAK
HHHCCHHHCCCCCEEECCCEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCHHHH
LIAAYHSPEVKQFIESKFGGAVVAAW
HHHHHCCHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MQRRFILKIAATLGAASLIGASSLAFADESIKVGVTGGPHAQLMDVVKTVAAKNGLNIKI
CCCEEEEEEHHHHCHHHHHCCCHHEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
VEFSDYVQPNAALAGGDLDANSYQHDPYLQAQVKDRGYKVIRVADTVTFPMGIYSKKVKS
EEECCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEECHHHHHHHHHH
LAELPNGAKIAVPNDPTNGGRALLLLQKQGLIKLRADAGLKATPLDIAENPRKLKIVELD
HHHCCCCCEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEC
AAQIPRSLGDVDAAAINTNFAMEAGLKPKQDAIAIEDPKGPYVNIIAIREADRNKPWVAK
HHHCCHHHCCCCCEEECCCEEEECCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCHHHH
LIAAYHSPEVKQFIESKFGGAVVAAW
HHHHHCCHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8335249; 8406866 [H]