| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is guaD [H]
Identifier: 186475474
GI number: 186475474
Start: 795644
End: 796969
Strand: Reverse
Name: guaD [H]
Synonym: Bphy_0709
Alternate gene names: 186475474
Gene position: 796969-795644 (Counterclockwise)
Preceding gene: 186475475
Following gene: 186475472
Centisome position: 22.91
GC content: 64.48
Gene sequence:
>1326_bases ATGACTCAAACAGCTTTTCGCGCGCACCTGCTGACGTTCAACGGCGATCCTGCGCAATCGTCCAACGCTGCAGTGTTCAA CGAAGACGGCCTTTTGATCGTCGAAGACGGACATGTCGTCGCGGCGGGTGCGCATGCATCCGTCGCTGCACAGCTCGCAC CTGGGACGCAGGTGATCGAGATGCGCGACAAGCTGATCGTCCCCGGTTTCATCGACACGCATATCCATTTCCCGCAGACG GACATGATTGCGTCGCCCGCGCCGGGTCTGCTGCCGTGGCTCGACACGTACACGTTCCCAACCGAGCGCGGTTTCAGCGA AGCCGCCGTCGCAGAGGACACGGCGCGCTTTTTCATCGACGAGCTGCTCGCGAACGGTACGACGACGGCGCTCGTCTACT GCACAGTGCACAAGCAATCGGCCGATGCGCTGTTCACGCAAGCGCAGCGCCGCAATGTGCGGATGATCGGCGGCAAGGTG CTGATGGATCGCAACTGCCCCGAGTTTCTGCGCGACACCGCGCAATCGGGCTACGACGATAGCGCCGAGCTGATCGCGCG CTGGCACGACAACGGGCGGCAGATGTACGCGCTAACGCCGCGCTTCGCGCCGACCTCGACGCAAGCGCAGCTCGAAGCGA CGGGTGCGCTCGCGAAGCTGCATCCCGACGTGTTCATCCAGACCCACGTCGCGGAGAATCATGACGAAGTGAAGTGGGTG GCGAGCCTGTTCCCCGGCCATCGCAGCTATCTCGACATCTACGATCACTATGGTCTGTTGCGGCCGCGCGCCGTGTACGG GCACTGCATTCACCTCGACACCGAGGACCGGCGACGGATGGCGCAAACGAGCGCCGTCGCGGCACACTGCCCGACGTCGA ACCTGTTTCTCGGCAGCGGACTGTTCGATTTCGACAAGGCGATCGAGTCGGGCATGCCTGTCGCGCTCGCCACCGACGTC GGCGGCGGCACGTCGTTCTCGATGCTGCAAACGATGAATGAAGCGCACAAGGTCGCGCGTCTTGGCGGGCATCATCTGAC GGCGACGCGCATGTTCTGGCTGGCGACGGCGGGCGCTGCCGAAGCGCTCGATCTCGGCGACAAGATCGGCACGCTCAAGC CGAAAGCGGAGGCAGACTTCGTGGTGCTCGATCCACGCGCGACGCCGCTGCTCGCGCGGCGCACTGCGCGCACCGAGACG CTGGAGGAACTGCTGTTCGCGTTCGCGCTACTGGGCGACGATCGCGCCGTGTATGAGACGTATGCAGCGGGGCAGCGTGT GCATCGACGTGACGATACGGTGGGGAAGGCGCGGATCGCGGCCTGA
Upstream 100 bases:
>100_bases CGTTCGTCACGCCCGCGCAGCGCGATGCGATGATCGCGAAACTCGATGCGCACTGGCGCGCATCTGCCTGATTCTTACCC GTTCGGAGACGGTTTCACTC
Downstream 100 bases:
>100_bases TTTTTTAGCGTGCGGCGGGTGGTTTTTTTGCTGGCGTTATGTTCGGTCGCTGCGCGTTGTTTTTTTTCTGGCAGCGAAAC GCAACCCGGATGCCGGCGAA
Product: guanine deaminase
Products: NA
Alternate protein names: Guanase; Guanine aminase; Guanine aminohydrolase; GAH [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTQTAFRAHLLTFNGDPAQSSNAAVFNEDGLLIVEDGHVVAAGAHASVAAQLAPGTQVIEMRDKLIVPGFIDTHIHFPQT DMIASPAPGLLPWLDTYTFPTERGFSEAAVAEDTARFFIDELLANGTTTALVYCTVHKQSADALFTQAQRRNVRMIGGKV LMDRNCPEFLRDTAQSGYDDSAELIARWHDNGRQMYALTPRFAPTSTQAQLEATGALAKLHPDVFIQTHVAENHDEVKWV ASLFPGHRSYLDIYDHYGLLRPRAVYGHCIHLDTEDRRRMAQTSAVAAHCPTSNLFLGSGLFDFDKAIESGMPVALATDV GGGTSFSMLQTMNEAHKVARLGGHHLTATRMFWLATAGAAEALDLGDKIGTLKPKAEADFVVLDPRATPLLARRTARTET LEELLFAFALLGDDRAVYETYAAGQRVHRRDDTVGKARIAA
Sequences:
>Translated_441_residues MTQTAFRAHLLTFNGDPAQSSNAAVFNEDGLLIVEDGHVVAAGAHASVAAQLAPGTQVIEMRDKLIVPGFIDTHIHFPQT DMIASPAPGLLPWLDTYTFPTERGFSEAAVAEDTARFFIDELLANGTTTALVYCTVHKQSADALFTQAQRRNVRMIGGKV LMDRNCPEFLRDTAQSGYDDSAELIARWHDNGRQMYALTPRFAPTSTQAQLEATGALAKLHPDVFIQTHVAENHDEVKWV ASLFPGHRSYLDIYDHYGLLRPRAVYGHCIHLDTEDRRRMAQTSAVAAHCPTSNLFLGSGLFDFDKAIESGMPVALATDV GGGTSFSMLQTMNEAHKVARLGGHHLTATRMFWLATAGAAEALDLGDKIGTLKPKAEADFVVLDPRATPLLARRTARTET LEELLFAFALLGDDRAVYETYAAGQRVHRRDDTVGKARIAA >Mature_440_residues TQTAFRAHLLTFNGDPAQSSNAAVFNEDGLLIVEDGHVVAAGAHASVAAQLAPGTQVIEMRDKLIVPGFIDTHIHFPQTD MIASPAPGLLPWLDTYTFPTERGFSEAAVAEDTARFFIDELLANGTTTALVYCTVHKQSADALFTQAQRRNVRMIGGKVL MDRNCPEFLRDTAQSGYDDSAELIARWHDNGRQMYALTPRFAPTSTQAQLEATGALAKLHPDVFIQTHVAENHDEVKWVA SLFPGHRSYLDIYDHYGLLRPRAVYGHCIHLDTEDRRRMAQTSAVAAHCPTSNLFLGSGLFDFDKAIESGMPVALATDVG GGTSFSMLQTMNEAHKVARLGGHHLTATRMFWLATAGAAEALDLGDKIGTLKPKAEADFVVLDPRATPLLARRTARTETL EELLFAFALLGDDRAVYETYAAGQRVHRRDDTVGKARIAA
Specific function: Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATZ/TRZ family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=419, Percent_Identity=31.980906921241, Blast_Score=200, Evalue=3e-51, Organism=Escherichia coli, GI1789249, Length=416, Percent_Identity=49.0384615384615, Blast_Score=435, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6319963, Length=406, Percent_Identity=29.5566502463054, Blast_Score=188, Evalue=1e-48, Organism=Drosophila melanogaster, GI24643849, Length=434, Percent_Identity=31.5668202764977, Blast_Score=196, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR014311 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.3 [H]
Molecular weight: Translated: 48186; Mature: 48055
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTAFRAHLLTFNGDPAQSSNAAVFNEDGLLIVEDGHVVAAGAHASVAAQLAPGTQVIE CCCCCEEEEEEEECCCCCCCCCCEEEECCCEEEEECCEEEEECCCHHHHEECCCCCEEEE MRDKLIVPGFIDTHIHFPQTDMIASPAPGLLPWLDTYTFPTERGFSEAAVAEDTARFFID ECCCEECCCEECCCEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ELLANGTTTALVYCTVHKQSADALFTQAQRRNVRMIGGKVLMDRNCPEFLRDTAQSGYDD HHHHCCCEEEEEEEEEECCCHHHHHHHHHHCCEEEECCEEEECCCCHHHHHHHHHCCCCC SAELIARWHDNGRQMYALTPRFAPTSTQAQLEATGALAKLHPDVFIQTHVAENHDEVKWV HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCHHHCCCCEEEEEECCCCCHHHHHH ASLFPGHRSYLDIYDHYGLLRPRAVYGHCIHLDTEDRRRMAQTSAVAAHCPTSNLFLGSG HHHCCCCCHHHHHHHHCCCCCCHHHEEEEEEECCHHHHHHHHHHHHEEECCCCCEEEECC LFDFDKAIESGMPVALATDVGGGTSFSMLQTMNEAHKVARLGGHHLTATRMFWLATAGAA CHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHEEEEEECCCH EALDLGDKIGTLKPKAEADFVVLDPRATPLLARRTARTETLEELLFAFALLGDDRAVYET HHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YAAGQRVHRRDDTVGKARIAA HHHHHHHHHCCCCCCCEEECC >Mature Secondary Structure TQTAFRAHLLTFNGDPAQSSNAAVFNEDGLLIVEDGHVVAAGAHASVAAQLAPGTQVIE CCCCEEEEEEEECCCCCCCCCCEEEECCCEEEEECCEEEEECCCHHHHEECCCCCEEEE MRDKLIVPGFIDTHIHFPQTDMIASPAPGLLPWLDTYTFPTERGFSEAAVAEDTARFFID ECCCEECCCEECCCEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ELLANGTTTALVYCTVHKQSADALFTQAQRRNVRMIGGKVLMDRNCPEFLRDTAQSGYDD HHHHCCCEEEEEEEEEECCCHHHHHHHHHHCCEEEECCEEEECCCCHHHHHHHHHCCCCC SAELIARWHDNGRQMYALTPRFAPTSTQAQLEATGALAKLHPDVFIQTHVAENHDEVKWV HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCHHHCCCCEEEEEECCCCCHHHHHH ASLFPGHRSYLDIYDHYGLLRPRAVYGHCIHLDTEDRRRMAQTSAVAAHCPTSNLFLGSG HHHCCCCCHHHHHHHHCCCCCCHHHEEEEEEECCHHHHHHHHHHHHEEECCCCCEEEECC LFDFDKAIESGMPVALATDVGGGTSFSMLQTMNEAHKVARLGGHHLTATRMFWLATAGAA CHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHEEEEEECCCH EALDLGDKIGTLKPKAEADFVVLDPRATPLLARRTARTETLEELLFAFALLGDDRAVYET HHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YAAGQRVHRRDDTVGKARIAA HHHHHHHHHCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 10913105 [H]