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The map label for this gene is 186475440

Identifier: 186475440

GI number: 186475440

Start: 759858

End: 761003

Strand: Reverse

Name: 186475440

Synonym: Bphy_0674

Alternate gene names: NA

Gene position: 761003-759858 (Counterclockwise)

Preceding gene: 186475441

Following gene: 186475433

Centisome position: 21.87

GC content: 61.69

Gene sequence:

>1146_bases
ATGAAAAAGACTCTCATGGTCGCGGCCCTGTCGGGCGTATTTGCAACGGCTGCGCATGCGCAAAGCAGCGTCACGCTGTA
CGGCCTGATTGATGCCGGCATCACCTACACGAACAACCAGCACGGCCACAGCAACTGGCAAATGACGAGCGGCTCGGTGA
ACGGCAGCCGTTTCGGCCTGCGCGGCGCTGAAGACCTCGGCGGCGGCCTGAAGGCGATCTTCACGTTGGAAAACGGTTTC
GGCATCAATGACGGCACGATGAAGCAAGGCAGCCGTCTGTTCGGCCGTCAGGCGTTCGTTGGTCTGGCAAGCGACCAGTT
CGGCGCCGTGACCCTCGGCCGTCAATACGACAGCATGGTCGACTACGTCGGCCCGCTGGCGCTGACGGGCACGCAGTACG
GCGGCACGCAGTTCGCCCACCCGTTCGACAACGACAACCTGAACAACTCGTTCCGCGTCAACAACTCGGTCAAGTACCAG
AGCGCGAACTACGCCGGCTTCAAGTTCGGCGCGTTGTATGGCTTCTCGAACCAGGCTGACGGCTTCGCAAACAACCGCGC
CTATAGCGCGGGCGCGTCGTACAGCTTCGCAGGCTTCAACCTCGCAGCTGCTTACCTGCAACTGAACAGCAACGGCGCAA
CGAGCGGCGCGGCGTTCAACTCGGGCGGCGCAGTGTCGAGCGACAACACGTTCTTCGCTGGCCGCCAACAGACGTGGGGC
GCAGGCGCGAACTACACGTTCGGCCCGGCGACGGCTGGCCTCGTGTACACGCAGACGAACCTGTCGAGCCTCAATGGCAT
CAGCCAGGGCGCGTCGGGCGTGTCGGGTGGCGTCGGCCTGAATGGCTCGAGCGCTCACTTCCAGAACTTCGAAGCAAACG
CACGTTACGCACTGACGCCGGCTCTGAGCGTCGCTGGTTCGTACACGTACACACGTGCAAGCATCGAAGGTCAGCGTCCG
CACTGGAACCAGTTCAACCTGCAAACGGCTTATGCGCTGTCGAAGCGTACCGACGTCTATCTGCAGGGCGAATACCAGCA
AGTCAGCGAAAACTCGCTCGTCAACGCCAACATCAATGGTCTTGGCGCTTCGTCGAGCAACGAGAAGCAAGTTTCTGTGA
CGGCTGGCCTGCGCCACCGCTTCTAA

Upstream 100 bases:

>100_bases
CACCGTGCGTTGTTCACGCGATTTGCCTCTCGCAGCAACCGCGTGAAGTTTCCTTCAAGCCTGGGTTTCCAAAGCCCATC
CTGTTCTCGGAGTTACAAAG

Downstream 100 bases:

>100_bases
GCATCAGCAGTACTCGCAGCATGAAAAAGGCGCCGTTTGCGGCGCCTTTTTCGTTTGTGCCGACATGTCTCGGTCGAGGC
GAGGCGTCCGGCGACACCCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKKTLMVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQHGHSNWQMTSGSVNGSRFGLRGAEDLGGGLKAIFTLENGF
GINDGTMKQGSRLFGRQAFVGLASDQFGAVTLGRQYDSMVDYVGPLALTGTQYGGTQFAHPFDNDNLNNSFRVNNSVKYQ
SANYAGFKFGALYGFSNQADGFANNRAYSAGASYSFAGFNLAAAYLQLNSNGATSGAAFNSGGAVSSDNTFFAGRQQTWG
AGANYTFGPATAGLVYTQTNLSSLNGISQGASGVSGGVGLNGSSAHFQNFEANARYALTPALSVAGSYTYTRASIEGQRP
HWNQFNLQTAYALSKRTDVYLQGEYQQVSENSLVNANINGLGASSSNEKQVSVTAGLRHRF

Sequences:

>Translated_381_residues
MKKTLMVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQHGHSNWQMTSGSVNGSRFGLRGAEDLGGGLKAIFTLENGF
GINDGTMKQGSRLFGRQAFVGLASDQFGAVTLGRQYDSMVDYVGPLALTGTQYGGTQFAHPFDNDNLNNSFRVNNSVKYQ
SANYAGFKFGALYGFSNQADGFANNRAYSAGASYSFAGFNLAAAYLQLNSNGATSGAAFNSGGAVSSDNTFFAGRQQTWG
AGANYTFGPATAGLVYTQTNLSSLNGISQGASGVSGGVGLNGSSAHFQNFEANARYALTPALSVAGSYTYTRASIEGQRP
HWNQFNLQTAYALSKRTDVYLQGEYQQVSENSLVNANINGLGASSSNEKQVSVTAGLRHRF
>Mature_381_residues
MKKTLMVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQHGHSNWQMTSGSVNGSRFGLRGAEDLGGGLKAIFTLENGF
GINDGTMKQGSRLFGRQAFVGLASDQFGAVTLGRQYDSMVDYVGPLALTGTQYGGTQFAHPFDNDNLNNSFRVNNSVKYQ
SANYAGFKFGALYGFSNQADGFANNRAYSAGASYSFAGFNLAAAYLQLNSNGATSGAAFNSGGAVSSDNTFFAGRQQTWG
AGANYTFGPATAGLVYTQTNLSSLNGISQGASGVSGGVGLNGSSAHFQNFEANARYALTPALSVAGSYTYTRASIEGQRP
HWNQFNLQTAYALSKRTDVYLQGEYQQVSENSLVNANINGLGASSSNEKQVSVTAGLRHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40062; Mature: 40062

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLMVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQHGHSNWQMTSGSVNGSRFGL
CCCEEEEEEHHHHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCEEEECCCCCCCEECC
RGAEDLGGGLKAIFTLENGFGINDGTMKQGSRLFGRQAFVGLASDQFGAVTLGRQYDSMV
CCHHHHCCCEEEEEEECCCCCCCCCCHHHCHHHHCCCEEEEECCCCCCEEEECCHHHHHH
DYVGPLALTGTQYGGTQFAHPFDNDNLNNSFRVNNSVKYQSANYAGFKFGALYGFSNQAD
HHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCEEEEEEECCCCCCC
GFANNRAYSAGASYSFAGFNLAAAYLQLNSNGATSGAAFNSGGAVSSDNTFFAGRQQTWG
CCCCCCEEECCCCEEECCCEEEEEEEEECCCCCCCCCEECCCCCCCCCCEEEECCCCCCC
AGANYTFGPATAGLVYTQTNLSSLNGISQGASGVSGGVGLNGSSAHFQNFEANARYALTP
CCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
ALSVAGSYTYTRASIEGQRPHWNQFNLQTAYALSKRTDVYLQGEYQQVSENSLVNANING
HHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHCCCCCEEECCCCC
LGASSSNEKQVSVTAGLRHRF
CCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKKTLMVAALSGVFATAAHAQSSVTLYGLIDAGITYTNNQHGHSNWQMTSGSVNGSRFGL
CCCEEEEEEHHHHHHHHHHCCCCEEEEEEEECCEEECCCCCCCCCEEEECCCCCCCEECC
RGAEDLGGGLKAIFTLENGFGINDGTMKQGSRLFGRQAFVGLASDQFGAVTLGRQYDSMV
CCHHHHCCCEEEEEEECCCCCCCCCCHHHCHHHHCCCEEEEECCCCCCEEEECCHHHHHH
DYVGPLALTGTQYGGTQFAHPFDNDNLNNSFRVNNSVKYQSANYAGFKFGALYGFSNQAD
HHHCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCEEEEEEECCCCCCC
GFANNRAYSAGASYSFAGFNLAAAYLQLNSNGATSGAAFNSGGAVSSDNTFFAGRQQTWG
CCCCCCEEECCCCEEECCCEEEEEEEEECCCCCCCCCEECCCCCCCCCCEEEECCCCCCC
AGANYTFGPATAGLVYTQTNLSSLNGISQGASGVSGGVGLNGSSAHFQNFEANARYALTP
CCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
ALSVAGSYTYTRASIEGQRPHWNQFNLQTAYALSKRTDVYLQGEYQQVSENSLVNANING
HHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEECCHHHCCCCCEEECCCCC
LGASSSNEKQVSVTAGLRHRF
CCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]