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The map label for this gene is ycjP [C]

Identifier: 186475396

GI number: 186475396

Start: 708916

End: 709773

Strand: Direct

Name: ycjP [C]

Synonym: Bphy_0630

Alternate gene names: 186475396

Gene position: 708916-709773 (Clockwise)

Preceding gene: 186475395

Following gene: 186475397

Centisome position: 20.38

GC content: 59.21

Gene sequence:

>858_bases
ATGCAGCCTAAGATGAACATCAGCCGTGCTGTCATCTACGCGGCACTGATTCTGTTTGCGTTGTACTTCCTGTTCCCGCT
GTACGTGATGCTGTCGACGTCGTTCAAGGACATCGACCAGCTACGCACGGGCAACCTGCTCACGCCGCCGTCGCACTGGA
CGGTCGCGCCGTGGGTGAAGGCGTGGAGCGAGGCGTGTACGGGTGTGCGCTGCGAGGGGATGCAGCCGTTCTTCTTCAAT
TCGGTGAAGATGGTGATTCCCGCCGTGCTGATCTCGTCGATCATCGGCGCGTTCAACGGCTATGTGCTGACGCACTGGCG
CTTTCGCGGCGCGGACGCGCTCTTCACGATGCTGCTGGTCGGCTGCTTCATTCCGTTTCAGGCGATCCTGCTGCCGATGG
CGCGTCTGCAAGGCTTCTTCGGCCTGTCGAACACGATTGGCGGTCTGGTGCTGGTGCACGTGGTCTACGGTATCGCGTTC
ACGACGATGTTCTTCCGCAACTTCTACGTGAGCGTACCGGCCGAACTTGTGAAGGCTGCGCGGATCGACGGAGCAGGGTT
CTTCATGATCTTCACGAAAATCATGATGCCGATCTCGCTGCCGATCTTCATGGTATGCCTGATCTGGCAATTCACGCAGA
TCTGGAATGACTTCCTGTTCGGTATCGTGTTCTCCGGTGTCGATTCGATGCCGATCACCGTGGCGCTGAACAACCTCGTG
AATACGTCGACGGGCGTGAAGGAATATAACGTCGACATGGCGGGCGCGATCATCGCGGCACTGCCGACGCTGCTCGTCTA
TGTGATTGCCGGCCGCTACTTCGTGCGCGGCCTGACGGCGGGCGCGGTGAAAGGCTAA

Upstream 100 bases:

>100_bases
GGGCAACTGGGCGTCGGCGCTGCGTCGTCGATGATGATGCTCGCAACCGTCGTGGCCGTGCTCGTGCCGCTGATGTACCT
TGAATCGAGGAGCACGCGCA

Downstream 100 bases:

>100_bases
TTTTTCTTTGGCGTGCTGCCCGCTTCATTCGATGAGGTGGGCGGCGGCTTGAACGGTATTCGGCTCGCGTCGCCAGCTAG
CGACGCATCAGCAGTACAGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQPKMNISRAVIYAALILFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPSHWTVAPWVKAWSEACTGVRCEGMQPFFFN
SVKMVIPAVLISSIIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQAILLPMARLQGFFGLSNTIGGLVLVHVVYGIAF
TTMFFRNFYVSVPAELVKAARIDGAGFFMIFTKIMMPISLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG

Sequences:

>Translated_285_residues
MQPKMNISRAVIYAALILFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPSHWTVAPWVKAWSEACTGVRCEGMQPFFFN
SVKMVIPAVLISSIIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQAILLPMARLQGFFGLSNTIGGLVLVHVVYGIAF
TTMFFRNFYVSVPAELVKAARIDGAGFFMIFTKIMMPISLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG
>Mature_285_residues
MQPKMNISRAVIYAALILFALYFLFPLYVMLSTSFKDIDQLRTGNLLTPPSHWTVAPWVKAWSEACTGVRCEGMQPFFFN
SVKMVIPAVLISSIIGAFNGYVLTHWRFRGADALFTMLLVGCFIPFQAILLPMARLQGFFGLSNTIGGLVLVHVVYGIAF
TTMFFRNFYVSVPAELVKAARIDGAGFFMIFTKIMMPISLPIFMVCLIWQFTQIWNDFLFGIVFSGVDSMPITVALNNLV
NTSTGVKEYNVDMAGAIIAALPTLLVYVIAGRYFVRGLTAGAVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=291, Percent_Identity=27.4914089347079, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1789860, Length=267, Percent_Identity=23.9700374531835, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1790464, Length=301, Percent_Identity=26.9102990033223, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31587; Mature: 31587

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]