| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186475364
Identifier: 186475364
GI number: 186475364
Start: 674491
End: 675579
Strand: Direct
Name: 186475364
Synonym: Bphy_0597
Alternate gene names: NA
Gene position: 674491-675579 (Clockwise)
Preceding gene: 186475362
Following gene: 186475368
Centisome position: 19.39
GC content: 65.75
Gene sequence:
>1089_bases GTGCGTGTCGTGGATCGCGGCTACAATGCGTCCACGATGAAAGCGACACGAAATTTGCGCAGGCCGCGGGTTCTGATCGT CGGTTGCGGCGATGTCGGCATGCGCTGTGTGCGGCAACTACAAGGACGCGCGCGTCTTTTTGCGCTTACGAGCCACGCCG AACGCCGCGACGAACTGCGCGCGGCGGGCGTGACGCCGATCGTCGGCGATCTCGACGTGCGCGCGAGTCTCTCGCGCATT GCCCGTCTCGCACCGACTGTGCTGCACCTCGCGCCTCCGCAAAAAAGCGGTGATGCGGACACGCGCACGCGTTCGCTGAT CGCCACCTTGACGGCGTCTCGCATCCGTCATGCCCGTCATGTTGCAGCGGGGCGTCTCAGACGCGCGCAGCACGGCATTC GTGCTCGCAAAACATCCGGTATTGTACCCGACGGAGGTAACCCGTCTCTGCGGGCCGGCCATGACGGGGACAAGCGTTTG CGCGTCGTGTATGCGAGCACCACAGGCGTGTACGGCGATTGCAACGGAGCGTGGCTCGATGAAACGCGCCCCGTCGCGCC TGCCAACGAGCGCGCGAAACGTCGCGTGTCGGCCGAAAGGCAATTGCGGCGGGCTGCGGCGCGGCGCGTGCTCACCGCGA GCATCGCGCGCATTCCGGGCATCTATGCGAGTAACCGGCTACCCCTTGCGCGGCTGGAGAAGCGCACGCCCGCGCTCATC GACGAAGACGACGTCTACACGAACCACATCCATGCCGACGACCTCGCCGCGATCCTGCTGCGCATGGCGACGCATGGCCG GCCGTCGCGCGTGCTCCACGCCAGCGACGACACGACGCTGAAAATGGGCGAATACTTCGATCGCGTAGCCGATGCGTTCG GCGTCGAACGCGCACCGCGCATCTCGCGCGACGAAGCTGAACAGCAACTCGGGGAGATGATGCTGTCGTTCATGCGCGAA TCGCGGCGCCTGATCAACACGCGCCTGAAGCGCGAACTGCAGATGCAGTTGCGCTATCCGCACGTCGACGACTTTCTGCG CACAGCGACCGCCCGGCCGGAAACGCTATCTGGCGCGGGCAAGCCGTGA
Upstream 100 bases:
>100_bases GGGTTCGTCGGGTTCCACCTGAAACTGCCGGCCGCTTTGCCGGAGCGTTACGTTAAATGCCATATGCGTTCGATCTTCGA ATACAGGGAGTCGGTAACCA
Downstream 100 bases:
>100_bases CGGAAAGCACAGTCAGATGATCAGGTAAGAGCAGGTAGCGCTTCCAGTAGCAGGAAGCAACAGAACGCGCCGATCAATGC GGCGATCAGGTTCGGCTCAT
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD-Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Epimerase/Dehydratase-Like Protein
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELRAAGVTPIVGDLDVRASLSRI ARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARHVAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRL RVVYASTTGVYGDCNGAWLDETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPRISRDEAEQQLGEMMLSFMRE SRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAGKP
Sequences:
>Translated_362_residues MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELRAAGVTPIVGDLDVRASLSRI ARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARHVAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRL RVVYASTTGVYGDCNGAWLDETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPRISRDEAEQQLGEMMLSFMRE SRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAGKP >Mature_362_residues MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELRAAGVTPIVGDLDVRASLSRI ARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARHVAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRL RVVYASTTGVYGDCNGAWLDETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPRISRDEAEQQLGEMMLSFMRE SRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAGKP
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40281; Mature: 40281
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELR CCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHH AAGVTPIVGDLDVRASLSRIARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARH HCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRLRVVYASTTGVYGDCNGAWLD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC ETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPR CCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCCC ISRDEAEQQLGEMMLSFMRESRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC KP CC >Mature Secondary Structure MRVVDRGYNASTMKATRNLRRPRVLIVGCGDVGMRCVRQLQGRARLFALTSHAERRDELR CCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCHHEEHHHHHHHHHHHHH AAGVTPIVGDLDVRASLSRIARLAPTVLHLAPPQKSGDADTRTRSLIATLTASRIRHARH HCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VAAGRLRRAQHGIRARKTSGIVPDGGNPSLRAGHDGDKRLRVVYASTTGVYGDCNGAWLD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCC ETRPVAPANERAKRRVSAERQLRRAAARRVLTASIARIPGIYASNRLPLARLEKRTPALI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC DEDDVYTNHIHADDLAAILLRMATHGRPSRVLHASDDTTLKMGEYFDRVADAFGVERAPR CCCCCEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCCC ISRDEAEQQLGEMMLSFMRESRRLINTRLKRELQMQLRYPHVDDFLRTATARPETLSGAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC KP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA