| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is braE [H]
Identifier: 186475357
GI number: 186475357
Start: 668602
End: 669771
Strand: Direct
Name: braE [H]
Synonym: Bphy_0590
Alternate gene names: 186475357
Gene position: 668602-669771 (Clockwise)
Preceding gene: 186475356
Following gene: 186475358
Centisome position: 19.22
GC content: 63.08
Gene sequence:
>1170_bases ATGACCTCAATTCAACCGATCGAGCCGTCCACGACGCTCATCCCCGAACGCAACCTCACGAAGACGCTGACGGTGGGCAT CATCACCGCCGTGTTCGTGATCGCTGCACCGATGATCATCGGTGCAGCGGGCGGCAACTACTGGGTCCGCGTGCTCGACT TCGCGATGCTGTACGTGATGCTCGCGCTCGGTCTGAACGTGGTGGTCGGCTTCGCCGGCCTGCTGGACCTGGGCTACATC GCGTTCTACGCAGTGGGCGCCTACACGGCAGCGTTGCTTAGCTCGCCGCACTTGTCGTCGCAGTTCGAATGGATCGCGCA TTTGGCGCCGGCCGGCCTGCATGTGCCGTTCCTCATCATCATCCCGTGCGCGATGGCGATTGCGGCGATCTGCGGCGTGA TTCTTGGCGCACCGACGCTGCGTCTGCGCGGCGACTACCTCGCAATCGTGACGTTGGGCTTCGGGGAGATCGTCCGGATC TTCCTGAACAACCTCGACCGTCCGGTGAACATCACGAACGGCCCGAAGGGCATCACGGGTATCGATCCGATCCACGTCGG CGACTTCAGCCTTGCGCAGACGCACTCGCTGTTCGGCCTGACGTTCCCGTCGGTGTACTCGTACTACTACGTGTTCGTGC TGTGCGCGCTCTTCGTAATCTGGGTGTGTACGCGTCTGCAGCACTCGCGCATCGGCCGCGCGTGGGCTGCGATCCGCGAA GACGAAATCGCCGCGAAGGCGATGGGCATCAATACGCGCGACGTGAAGCTGCTGGCGTTCGCGATGGGCGCATCGTTCGG CGGCCTGTCGGGCGCGATGTTCGGCGCGTTCCAGGGCTTCGTTTCGCCGGAATCGTTCACGCTGCCGGAATCGATCGTCG TGCTGGCTTGCGTGGTGCTGGGCGGCATGGGCCACATCCCGGGCGTGATTCTCGGCGCGGTGCTGCTCGCCGTGCTGCCG GAATTCCTGCGCTCGACGATGGGTCCGCTGCAGCACATGATCTTCGGTCATGAAATCGTCGATACGGAAGTGATCCGTCA GCTCGTGTACGCACTCGCGATGGTGCTGATCATGCTGTACCGCTCGGAAGGCCTGTGGCCGTCACCGAAGCACGAAGACA AGATCGCGAAGCTTGCGAAGCGCAACGGCAAGAAGCCGGTGCGTGCTTGA
Upstream 100 bases:
>100_bases CATCGTGCTGATCATCGTGCTGGTGTTCCGTCCGTCGGGCCTGCTTGGCGAACGTGTCGCGGATCGCGCTTAACGTGCGC TTGGGAAAGGAGCAAATACA
Downstream 100 bases:
>100_bases ACGGCCGACAGGAGAAACAAACATGAGCGACAAGAAAATCCGTTTGTCCGTAAAGGGCGTGAACAAGCGCTTCGGCGGTT TGCAGGCATTGTCGGATGTC
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTSIQPIEPSTTLIPERNLTKTLTVGIITAVFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI AFYAVGAYTAALLSSPHLSSQFEWIAHLAPAGLHVPFLIIIPCAMAIAAICGVILGAPTLRLRGDYLAIVTLGFGEIVRI FLNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLTFPSVYSYYYVFVLCALFVIWVCTRLQHSRIGRAWAAIRE DEIAAKAMGINTRDVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLP EFLRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWPSPKHEDKIAKLAKRNGKKPVRA
Sequences:
>Translated_389_residues MTSIQPIEPSTTLIPERNLTKTLTVGIITAVFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYI AFYAVGAYTAALLSSPHLSSQFEWIAHLAPAGLHVPFLIIIPCAMAIAAICGVILGAPTLRLRGDYLAIVTLGFGEIVRI FLNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLTFPSVYSYYYVFVLCALFVIWVCTRLQHSRIGRAWAAIRE DEIAAKAMGINTRDVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLP EFLRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWPSPKHEDKIAKLAKRNGKKPVRA >Mature_388_residues TSIQPIEPSTTLIPERNLTKTLTVGIITAVFVIAAPMIIGAAGGNYWVRVLDFAMLYVMLALGLNVVVGFAGLLDLGYIA FYAVGAYTAALLSSPHLSSQFEWIAHLAPAGLHVPFLIIIPCAMAIAAICGVILGAPTLRLRGDYLAIVTLGFGEIVRIF LNNLDRPVNITNGPKGITGIDPIHVGDFSLAQTHSLFGLTFPSVYSYYYVFVLCALFVIWVCTRLQHSRIGRAWAAIRED EIAAKAMGINTRDVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVLGGMGHIPGVILGAVLLAVLPE FLRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLYRSEGLWPSPKHEDKIAKLAKRNGKKPVRA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=346, Percent_Identity=42.1965317919075, Blast_Score=207, Evalue=7e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 41882; Mature: 41751
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIQPIEPSTTLIPERNLTKTLTVGIITAVFVIAAPMIIGAAGGNYWVRVLDFAMLYVM CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LALGLNVVVGFAGLLDLGYIAFYAVGAYTAALLSSPHLSSQFEWIAHLAPAGLHVPFLII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH IPCAMAIAAICGVILGAPTLRLRGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITG HHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IDPIHVGDFSLAQTHSLFGLTFPSVYSYYYVFVLCALFVIWVCTRLQHSRIGRAWAAIRE CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIAAKAMGINTRDVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVL HHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GGMGHIPGVILGAVLLAVLPEFLRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH RSEGLWPSPKHEDKIAKLAKRNGKKPVRA HCCCCCCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TSIQPIEPSTTLIPERNLTKTLTVGIITAVFVIAAPMIIGAAGGNYWVRVLDFAMLYVM CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LALGLNVVVGFAGLLDLGYIAFYAVGAYTAALLSSPHLSSQFEWIAHLAPAGLHVPFLII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHH IPCAMAIAAICGVILGAPTLRLRGDYLAIVTLGFGEIVRIFLNNLDRPVNITNGPKGITG HHHHHHHHHHHHHHHCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC IDPIHVGDFSLAQTHSLFGLTFPSVYSYYYVFVLCALFVIWVCTRLQHSRIGRAWAAIRE CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEIAAKAMGINTRDVKLLAFAMGASFGGLSGAMFGAFQGFVSPESFTLPESIVVLACVVL HHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GGMGHIPGVILGAVLLAVLPEFLRSTMGPLQHMIFGHEIVDTEVIRQLVYALAMVLIMLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH RSEGLWPSPKHEDKIAKLAKRNGKKPVRA HCCCCCCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]