| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is msrA [H]
Identifier: 186475279
GI number: 186475279
Start: 582616
End: 583167
Strand: Direct
Name: msrA [H]
Synonym: Bphy_0511
Alternate gene names: 186475279
Gene position: 582616-583167 (Clockwise)
Preceding gene: 186475277
Following gene: 186475283
Centisome position: 16.75
GC content: 63.04
Gene sequence:
>552_bases ATGAGTCAGTCAGTCGAGACCGCCACGCTGGGCGGCGGGTGTTTCTGGTGTCTGGAGGCGGTGTTTCTCGGCGTCGATGG CGTGACGTCGGTGGAATCGGGGTATGCGGGCGGACAGACCGACAATCCGTCCTACGAGCAGGTGTGTGACGGCAACACGG GTCACGCGGAAGTCGTGAAGGTGGAATTCGATCCGGCGCGCATCAGCTATCGCGAGGTGCTGGACATTTTCTTTGCGATC CACGATCCGACGCAGCTTAACCGCCAGGGCAACGATGTCGGCACGCAATACCGGTCGGTGATCTTCACGCACTCCGACGC GCAGCGCGAGACGGCGCTGCAGGCGATCCGCGAAATCGGCGCCGAAGGCGTCTACGACGGCCAGATCGTCACGCAGGTGC TGTCGCTCGACGGCAACTACTGGGCCGCCGAGGCCTATCACCAGAACTACTTCGCGCAGCATCCTGATCAAGGCTATTGC GCGTTCGTCGTCGCGCCGAAGGTGGCGAAGTTCCGGCAGAAGTTCGCGCATCGGATCAAGGCGGGGGCGTGA
Upstream 100 bases:
>100_bases TGGGCCGGTCGGATGCGGTGAAGAGTGTCCAGGTGACTGCGGCGAGCGGTGCGTTTGTCCTCGAGACGGACGTCGCGGCG AGCCATTCCAAGGAGCGAGC
Downstream 100 bases:
>100_bases GCGCGGTTTGATTGGGGGTGTGTCGATGTGAGCGGTGCGAACCCGAGCGGCTGCGCCGTTGTTCGACTACGCGGCTTCGG CCGCGTTTTCTTTTTGCGCG
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSQSVETATLGGGCFWCLEAVFLGVDGVTSVESGYAGGQTDNPSYEQVCDGNTGHAEVVKVEFDPARISYREVLDIFFAI HDPTQLNRQGNDVGTQYRSVIFTHSDAQRETALQAIREIGAEGVYDGQIVTQVLSLDGNYWAAEAYHQNYFAQHPDQGYC AFVVAPKVAKFRQKFAHRIKAGA
Sequences:
>Translated_183_residues MSQSVETATLGGGCFWCLEAVFLGVDGVTSVESGYAGGQTDNPSYEQVCDGNTGHAEVVKVEFDPARISYREVLDIFFAI HDPTQLNRQGNDVGTQYRSVIFTHSDAQRETALQAIREIGAEGVYDGQIVTQVLSLDGNYWAAEAYHQNYFAQHPDQGYC AFVVAPKVAKFRQKFAHRIKAGA >Mature_182_residues SQSVETATLGGGCFWCLEAVFLGVDGVTSVESGYAGGQTDNPSYEQVCDGNTGHAEVVKVEFDPARISYREVLDIFFAIH DPTQLNRQGNDVGTQYRSVIFTHSDAQRETALQAIREIGAEGVYDGQIVTQVLSLDGNYWAAEAYHQNYFAQHPDQGYCA FVVAPKVAKFRQKFAHRIKAGA
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=163, Percent_Identity=43.558282208589, Blast_Score=132, Evalue=2e-31, Organism=Homo sapiens, GI208609995, Length=163, Percent_Identity=43.558282208589, Blast_Score=131, Evalue=3e-31, Organism=Homo sapiens, GI208609993, Length=114, Percent_Identity=43.859649122807, Blast_Score=88, Evalue=4e-18, Organism=Escherichia coli, GI1790665, Length=154, Percent_Identity=41.5584415584416, Blast_Score=125, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17533973, Length=147, Percent_Identity=31.2925170068027, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320881, Length=160, Percent_Identity=41.875, Blast_Score=112, Evalue=3e-26, Organism=Drosophila melanogaster, GI24664627, Length=165, Percent_Identity=32.7272727272727, Blast_Score=96, Evalue=1e-20, Organism=Drosophila melanogaster, GI45553131, Length=159, Percent_Identity=31.4465408805031, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24664631, Length=165, Percent_Identity=31.5151515151515, Blast_Score=88, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 20076; Mature: 19945
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSVETATLGGGCFWCLEAVFLGVDGVTSVESGYAGGQTDNPSYEQVCDGNTGHAEVVK CCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEE VEFDPARISYREVLDIFFAIHDPTQLNRQGNDVGTQYRSVIFTHSDAQRETALQAIREIG EECCCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHC AEGVYDGQIVTQVLSLDGNYWAAEAYHQNYFAQHPDQGYCAFVVAPKVAKFRQKFAHRIK CCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHC AGA CCC >Mature Secondary Structure SQSVETATLGGGCFWCLEAVFLGVDGVTSVESGYAGGQTDNPSYEQVCDGNTGHAEVVK CCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEE VEFDPARISYREVLDIFFAIHDPTQLNRQGNDVGTQYRSVIFTHSDAQRETALQAIREIG EECCCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHC AEGVYDGQIVTQVLSLDGNYWAAEAYHQNYFAQHPDQGYCAFVVAPKVAKFRQKFAHRIK CCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHC AGA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]