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The map label for this gene is yobA [H]

Identifier: 186475199

GI number: 186475199

Start: 490109

End: 490591

Strand: Direct

Name: yobA [H]

Synonym: Bphy_0430

Alternate gene names: 186475199

Gene position: 490109-490591 (Clockwise)

Preceding gene: 186475194

Following gene: 186475200

Centisome position: 14.09

GC content: 61.7

Gene sequence:

>483_bases
ATGGCTACTGCTTCATGGCCGATGAAGGTCGTTGAACTGACTGAACTGCGAGACATCGAAGCGTACTATCCCGTCCATCC
CTGCGTTTTCCATCCAGGCCAGCCTATGACTCTTTCCTTGTCCTTGAACATGCCACTTCGCTGGCTCGCGGCGTGCGGTG
TATCGCTCGCCATCGCGTCGAACGCTTTTGCCCATGCTACGCCCACCTCGCGCGATCCAGCGCCGAACGCCGAAGTCGCC
GCGCCTTCGGCCGTGACCCTCCACTTCAGTGAGCCGCTCGAGCCGGCGTTCAGCAAGATCGTGCTCGTCGATGCAAGCGG
CAGGCCTGCTGCGTCGGCGGCATCGCAAGTCGATGCACAGGACAAGAAGACGATGTCGCTCACGTTGCAGTCGTTGGCGC
CCGGGCGTTACACCGTGCAATGGGCGGCAGTCGCCGAAGACGGGCATCGCACGAAGGGCAGCTACGGGTTCAGCGTCAAA
TGA

Upstream 100 bases:

>100_bases
TCGGCGGCGACTGTCTCTTTGTTGCCTCGTTCTGTTTCAGTTTTGAGCGAATTCGTGTAGGGCGCTGCGCTTGAACGCCG
CCGCTTCATGACTACGCGTG

Downstream 100 bases:

>100_bases
AAGTCGACGGATTGTGGATCGGGCAGGTCGCCATGGCTGTGCTCATGAATGTTGCGTTCGCGTTTGCCGTCGGTTCGGCA
TTGCTCGGCGCGTGGCTCGC

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MATASWPMKVVELTELRDIEAYYPVHPCVFHPGQPMTLSLSLNMPLRWLAACGVSLAIASNAFAHATPTSRDPAPNAEVA
APSAVTLHFSEPLEPAFSKIVLVDASGRPAASAASQVDAQDKKTMSLTLQSLAPGRYTVQWAAVAEDGHRTKGSYGFSVK

Sequences:

>Translated_160_residues
MATASWPMKVVELTELRDIEAYYPVHPCVFHPGQPMTLSLSLNMPLRWLAACGVSLAIASNAFAHATPTSRDPAPNAEVA
APSAVTLHFSEPLEPAFSKIVLVDASGRPAASAASQVDAQDKKTMSLTLQSLAPGRYTVQWAAVAEDGHRTKGSYGFSVK
>Mature_159_residues
ATASWPMKVVELTELRDIEAYYPVHPCVFHPGQPMTLSLSLNMPLRWLAACGVSLAIASNAFAHATPTSRDPAPNAEVAA
PSAVTLHFSEPLEPAFSKIVLVDASGRPAASAASQVDAQDKKTMSLTLQSLAPGRYTVQWAAVAEDGHRTKGSYGFSVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=117, Percent_Identity=41.025641025641, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 17021; Mature: 16889

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATASWPMKVVELTELRDIEAYYPVHPCVFHPGQPMTLSLSLNMPLRWLAACGVSLAIAS
CCCCCCCEEEEEECCCCCCCEECCCCCEEECCCCCEEEEEECCCCHHHHHHCCEEEEEEC
NAFAHATPTSRDPAPNAEVAAPSAVTLHFSEPLEPAFSKIVLVDASGRPAASAASQVDAQ
CCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHCCCC
DKKTMSLTLQSLAPGRYTVQWAAVAEDGHRTKGSYGFSVK
CCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEECC
>Mature Secondary Structure 
ATASWPMKVVELTELRDIEAYYPVHPCVFHPGQPMTLSLSLNMPLRWLAACGVSLAIAS
CCCCCCEEEEEECCCCCCCEECCCCCEEECCCCCEEEEEECCCCHHHHHHCCEEEEEEC
NAFAHATPTSRDPAPNAEVAAPSAVTLHFSEPLEPAFSKIVLVDASGRPAASAASQVDAQ
CCEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHCCCC
DKKTMSLTLQSLAPGRYTVQWAAVAEDGHRTKGSYGFSVK
CCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]